Ptchd1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | X | 43,496,907 - 43,548,413 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 39,681,910 - 39,733,416 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 39,681,910 - 39,733,519 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 40,905,386 - 40,956,900 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 44,372,699 - 44,424,207 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 42,057,286 - 42,108,794 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 42,558,912 - 42,610,430 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 42,558,931 - 42,614,242 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 42,866,040 - 42,917,474 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 61,079,670 - 61,131,155 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 40,277,508 - 40,329,013 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q21 | NCBI | | | | |
|
PTCHD1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | X | 23,334,396 - 23,404,374 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 23,334,849 - 23,404,374 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 23,352,966 - 23,422,491 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 23,262,906 - 23,324,839 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 23,112,751 - 23,172,076 | NCBI | | | | | Celera | X | 27,474,669 - 27,536,553 (+) | NCBI | | Celera | | | Cytogenetic Map | X | p22.11 | NCBI | | | | | HuRef | X | 21,094,048 - 21,155,060 (+) | NCBI | | HuRef | | | CHM1_1 | X | 23,384,049 - 23,445,953 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 22,917,921 - 22,987,936 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Ptchd1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | X | 154,352,732 - 154,407,185 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 154,356,451 - 154,406,810 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 155,569,736 - 155,624,170 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 155,573,455 - 155,623,814 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 152,004,279 - 152,057,870 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 150,914,257 - 150,964,043 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 138,872,944 - 138,926,972 (-) | NCBI | | Celera | | | Cytogenetic Map | X | F3 | NCBI | | | | | cM Map | X | 72.38 | NCBI | | | | |
|
Ptchd1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955509 | 3,715,771 - 3,767,541 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955509 | 3,716,086 - 3,767,541 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PTCHD1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | X | 25,131,355 - 25,192,568 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 25,134,743 - 25,195,957 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 15,929,619 - 15,991,194 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 23,305,555 - 23,366,273 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 23,305,555 - 23,366,273 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
PTCHD1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | X | 19,096,787 - 19,153,367 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 19,096,559 - 19,148,528 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | ROS_Cfam_1.0 | X | 19,050,277 - 19,105,259 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 19,049,225 - 19,101,569 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 19,089,857 - 19,144,818 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 19,119,773 - 19,174,752 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 19,176,247 - 19,231,008 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Ptchd1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | X | 12,031,839 - 12,087,657 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936624 | 1,072,857 - 1,125,994 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936624 | 1,072,857 - 1,125,962 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PTCHD1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | X | 19,507,739 - 19,561,828 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 19,508,501 - 19,563,298 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 20,851,579 - 20,904,599 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PTCHD1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | X | 21,810,530 - 21,874,109 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 21,810,956 - 21,870,417 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666056 | 23,674,097 - 23,736,621 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Ptchd1 (Heterocephalus glaber - naked mole-rat) |
|