Pigc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 13 | 76,876,894 - 76,879,420 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 13 | 74,343,619 - 74,346,148 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 74,296,854 - 74,346,211 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 76,913,282 - 76,915,637 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 78,220,480 - 78,222,835 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 75,480,339 - 75,482,694 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 13 | 79,886,832 - 79,889,305 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 79,886,832 - 79,889,304 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 84,780,555 - 84,783,014 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 77,664,442 - 77,666,797 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 77,678,629 - 77,680,984 (+) | NCBI | | | | | Celera | 13 | 74,096,747 - 74,099,102 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | q22 | NCBI | | | | |
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PIGC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 172,441,457 - 172,444,069 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 172,370,189 - 172,444,086 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 172,410,597 - 172,413,209 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 170,677,220 - 170,679,853 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 169,142,254 - 169,144,887 | NCBI | | | | | Celera | 1 | 145,520,042 - 145,522,675 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q24.3 | NCBI | | | | | HuRef | 1 | 143,634,549 - 143,637,182 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 173,832,716 - 173,835,349 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 171,798,151 - 171,800,763 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Pigc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 161,796,757 - 161,801,029 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 161,796,755 - 161,801,004 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 161,969,188 - 161,973,460 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 161,969,186 - 161,973,435 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 163,899,319 - 163,903,566 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 163,805,865 - 163,810,112 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 164,424,173 - 164,428,420 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | H2.1 | NCBI | | | | | cM Map | 1 | 69.95 | NCBI | | | | |
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Pigc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955406 | 12,891,187 - 12,893,935 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955406 | 12,891,187 - 12,893,935 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PIGC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 77,301,941 - 77,304,688 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 76,982,114 - 76,984,790 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 147,891,867 - 147,942,057 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 151,601,116 - 151,652,039 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 151,649,468 - 151,650,361 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PIGC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 7 | 26,548,894 - 26,551,702 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 7 | 26,550,524 - 26,551,417 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 26,079,654 - 26,082,476 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 26,299,949 - 26,302,764 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 26,300,015 - 26,302,740 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 7 | 26,210,541 - 26,213,364 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 26,281,110 - 26,283,930 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 26,431,378 - 26,434,197 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pigc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 97,115,826 - 97,118,184 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936481 | 14,962,613 - 14,964,861 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936481 | 14,962,572 - 14,964,929 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PIGC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 114,824,802 - 114,827,413 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 114,824,795 - 114,827,731 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 126,420,136 - 126,423,071 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PIGC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 25 | 56,711,459 - 56,714,109 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 56,712,941 - 56,713,834 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 58,317,307 - 58,320,157 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pigc (Heterocephalus glaber - naked mole-rat) |
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