Cmas (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 177,449,801 - 177,468,117 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 175,718,808 - 175,737,128 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 175,718,808 - 175,737,125 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 182,013,798 - 182,032,139 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 177,798,073 - 177,816,414 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 176,418,640 - 176,436,981 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 176,994,129 - 177,012,445 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 176,994,129 - 177,012,444 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 241,203,361 - 241,221,676 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 180,650,927 - 180,669,243 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 180,896,050 - 180,914,366 (+) | NCBI | | | | | Celera | 4 | 164,249,097 - 164,267,377 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q44 | NCBI | | | | |
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CMAS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 22,046,218 - 22,065,668 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 22,046,218 - 22,065,674 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 22,199,152 - 22,218,602 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 22,090,426 - 22,109,869 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 22,090,425 - 22,109,869 | NCBI | | | | | Celera | 12 | 27,353,627 - 27,373,064 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12.1 | NCBI | | | | | HuRef | 12 | 21,972,423 - 21,991,850 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 22,164,047 - 22,183,534 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 21,924,274 - 21,943,724 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Cmas (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 142,702,468 - 142,721,440 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 142,702,412 - 142,721,440 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 142,756,686 - 142,775,714 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 142,756,686 - 142,775,714 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 142,705,206 - 142,724,234 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 142,713,995 - 142,732,930 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 145,818,239 - 145,837,265 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | G2 | NCBI | | | | | cM Map | 6 | 74.66 | NCBI | | | | |
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Cmas (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955413 | 17,575,469 - 17,599,859 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 17,575,469 - 17,596,379 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CMAS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 74,738,425 - 74,757,537 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 74,734,823 - 74,753,931 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 64,234,241 - 64,253,306 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 66,838,670 - 66,857,774 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 66,838,670 - 66,857,774 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CMAS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 25,097,907 - 25,117,003 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 25,098,091 - 25,116,965 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 21,243,508 - 21,262,605 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 25,317,491 - 25,336,605 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 25,317,494 - 25,336,619 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 25,116,424 - 25,135,532 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 25,139,768 - 25,158,852 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 21,412,861 - 21,431,958 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cmas (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 86,955,025 - 86,972,811 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936548 | 4,877,530 - 4,895,822 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936548 | 4,877,753 - 4,895,768 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CMAS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 51,438,020 - 51,458,615 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 51,438,175 - 51,458,531 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 54,719,668 - 54,740,011 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CMAS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 21,896,607 - 21,919,211 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 21,896,630 - 21,915,657 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666069 | 13,226,303 - 13,245,314 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cmas (Heterocephalus glaber - naked mole-rat) |
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