Adck1 (aarF domain containing kinase 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Adck1 (aarF domain containing kinase 1) Rattus norvegicus
Analyze
Symbol: Adck1
Name: aarF domain containing kinase 1
RGD ID: 1308263
Description: Predicted to enable ATP binding activity and protein kinase activity. Predicted to be involved in lipid homeostasis; mitochondrion organization; and regulation of mitochondrion organization. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial inner membrane. Orthologous to human ADCK1 (aarF domain containing kinase 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: aarF domain-containing protein kinase 1; LOC366698; uncharacterized aarF domain-containing protein kinase 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86113,005,333 - 113,107,960 (+)NCBIGRCr8
mRatBN7.26107,277,170 - 107,377,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6107,277,244 - 107,377,055 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6107,447,792 - 107,547,603 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06107,746,614 - 107,846,436 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06107,116,306 - 107,216,119 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06111,640,652 - 111,741,418 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6111,642,411 - 111,740,481 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06120,923,362 - 121,020,830 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46111,872,315 - 111,992,613 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16111,883,788 - 111,995,600 (+)NCBI
Celera6105,091,084 - 105,190,719 (+)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18614015   PMID:31125351  


Genomics

Comparative Map Data
Adck1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86113,005,333 - 113,107,960 (+)NCBIGRCr8
mRatBN7.26107,277,170 - 107,377,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6107,277,244 - 107,377,055 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6107,447,792 - 107,547,603 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06107,746,614 - 107,846,436 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06107,116,306 - 107,216,119 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06111,640,652 - 111,741,418 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6111,642,411 - 111,740,481 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06120,923,362 - 121,020,830 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46111,872,315 - 111,992,613 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16111,883,788 - 111,995,600 (+)NCBI
Celera6105,091,084 - 105,190,719 (+)NCBICelera
Cytogenetic Map6q31NCBI
ADCK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381477,800,109 - 77,935,014 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1477,800,109 - 77,935,014 (+)EnsemblGRCh38hg38GRCh38
GRCh371478,266,452 - 78,401,357 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361477,336,227 - 77,470,047 (+)NCBINCBI36Build 36hg18NCBI36
Build 341477,336,226 - 77,470,047NCBI
Celera1458,304,590 - 58,438,453 (+)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1458,432,570 - 58,566,242 (+)NCBIHuRef
CHM1_11478,205,866 - 78,339,895 (+)NCBICHM1_1
T2T-CHM13v2.01472,009,104 - 72,144,049 (+)NCBIT2T-CHM13v2.0
Adck1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391288,327,264 - 88,428,496 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1288,327,324 - 88,428,494 (+)EnsemblGRCm39 Ensembl
GRCm381288,360,494 - 88,461,726 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1288,360,554 - 88,461,724 (+)EnsemblGRCm38mm10GRCm38
MGSCv371289,599,245 - 89,700,162 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361288,874,056 - 88,975,197 (+)NCBIMGSCv36mm8
Celera1289,684,194 - 89,789,768 (+)NCBICelera
Cytogenetic Map12D2- D3NCBI
cM Map1242.55NCBI
Adck1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554381,638,668 - 1,751,962 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554381,638,673 - 1,760,791 (+)NCBIChiLan1.0ChiLan1.0
ADCK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21578,887,369 - 79,027,201 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11478,103,891 - 78,243,706 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01458,355,670 - 58,495,032 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11477,556,389 - 77,695,344 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1477,556,389 - 77,695,344 (+)Ensemblpanpan1.1panPan2
ADCK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1850,512,342 - 50,666,410 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl850,512,261 - 50,656,958 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha850,199,173 - 50,346,730 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0850,746,049 - 50,892,474 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl850,780,215 - 50,927,625 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1850,408,135 - 50,573,880 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0850,431,378 - 50,578,902 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0850,830,024 - 50,977,731 (+)NCBIUU_Cfam_GSD_1.0
Adck1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864025,369,304 - 25,472,845 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364886,592,405 - 6,698,140 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364886,579,461 - 6,699,664 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADCK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7100,777,144 - 100,902,948 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17100,777,125 - 100,909,140 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27106,832,993 - 106,903,089 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADCK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12455,063,870 - 55,193,475 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2455,080,088 - 55,193,471 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605343,247,543 - 43,375,449 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adck1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473423,976,811 - 24,116,546 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473423,994,929 - 24,116,551 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Adck1
378 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:373
Count of miRNA genes:215
Interacting mature miRNAs:257
Transcripts:ENSRNOT00000016962
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
1331797Bp213Blood pressure QTL 2133.291arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)6104085867128713626Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat

Markers in Region
D6Rat57  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26107,366,652 - 107,366,874 (+)MAPPERmRatBN7.2
Rnor_6.06111,730,516 - 111,730,737NCBIRnor6.0
Rnor_5.06121,009,928 - 121,010,149UniSTSRnor5.0
RGSC_v3.46111,983,107 - 111,983,328RGDRGSC3.4
RGSC_v3.46111,983,108 - 111,983,329UniSTSRGSC3.4
RGSC_v3.16111,986,638 - 111,986,859RGD
Celera6105,181,252 - 105,181,473UniSTS
RH 3.4 Map6744.5RGD
RH 3.4 Map6744.5UniSTS
RH 2.0 Map6992.3RGD
FHH x ACI Map669.11RGD
Cytogenetic Map6q31UniSTS
D6Rat81  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26107,351,142 - 107,351,382 (+)MAPPERmRatBN7.2
Rnor_6.06111,715,478 - 111,715,717NCBIRnor6.0
Rnor_5.06120,994,890 - 120,995,129UniSTSRnor5.0
RGSC_v3.46111,967,598 - 111,967,837UniSTSRGSC3.4
RGSC_v3.46111,967,597 - 111,967,837RGDRGSC3.4
RGSC_v3.16111,971,129 - 111,971,368RGD
Celera6105,165,742 - 105,165,981UniSTS
RH 3.4 Map6744.5RGD
RH 3.4 Map6744.5UniSTS
RH 2.0 Map6991.2RGD
SHRSP x BN Map665.7398RGD
FHH x ACI Map669.11RGD
Cytogenetic Map6q31UniSTS
D6Rat162  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.06120,961,921 - 120,962,177NCBIRnor5.0
RGSC_v3.46111,934,250 - 111,934,579RGDRGSC3.4
RGSC_v3.46111,934,251 - 111,934,579UniSTSRGSC3.4
RGSC_v3.16111,937,779 - 111,938,210RGD
Celera6105,132,401 - 105,132,729UniSTS
SHRSP x BN Map665.7398RGD
SHRSP x BN Map665.7398UniSTS
Cytogenetic Map6q31UniSTS
AI169386  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26107,375,870 - 107,376,028 (+)MAPPERmRatBN7.2
Rnor_6.06111,740,232 - 111,740,389NCBIRnor6.0
Rnor_5.06121,019,644 - 121,019,801UniSTSRnor5.0
RGSC_v3.46111,992,364 - 111,992,521UniSTSRGSC3.4
Celera6105,190,470 - 105,190,627UniSTS
RH 3.4 Map6755.6UniSTS
Cytogenetic Map6q31UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 8 2 2 2 1 52 18 11
Low 3 35 55 39 19 39 8 10 22 17 30 11 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001108985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000016962   ⟹   ENSRNOP00000016962
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6107,277,458 - 107,376,120 (+)Ensembl
Rnor_6.0 Ensembl6111,642,411 - 111,740,481 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000104832   ⟹   ENSRNOP00000078150
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6107,277,244 - 107,377,055 (+)Ensembl
RefSeq Acc Id: NM_001108985   ⟹   NP_001102455
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,386 - 113,107,960 (+)NCBI
mRatBN7.26107,277,474 - 107,377,057 (+)NCBI
Rnor_6.06111,642,411 - 111,740,481 (+)NCBI
Rnor_5.06120,923,362 - 121,020,830 (+)NCBI
RGSC_v3.46111,872,315 - 111,992,613 (+)RGD
Celera6105,091,084 - 105,190,719 (+)RGD
Sequence:
RefSeq Acc Id: NM_001399747   ⟹   NP_001386676
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,134 - 113,107,960 (+)NCBI
mRatBN7.26107,277,222 - 107,377,057 (+)NCBI
RefSeq Acc Id: NM_001399748   ⟹   NP_001386677
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,111 - 113,107,960 (+)NCBI
mRatBN7.26107,277,199 - 107,377,057 (+)NCBI
RefSeq Acc Id: NM_001399749   ⟹   NP_001386678
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,111 - 113,107,960 (+)NCBI
mRatBN7.26107,277,199 - 107,377,057 (+)NCBI
RefSeq Acc Id: NM_001399750   ⟹   NP_001386679
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,111 - 113,107,960 (+)NCBI
mRatBN7.26107,277,199 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112651   ⟹   XP_038968579
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,346 - 113,107,960 (+)NCBI
mRatBN7.26107,277,456 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112653   ⟹   XP_038968581
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,045,113 - 113,107,960 (+)NCBI
mRatBN7.26107,314,136 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112655   ⟹   XP_038968583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,019,825 - 113,107,960 (+)NCBI
mRatBN7.26107,293,292 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112657   ⟹   XP_038968585
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,008,383 - 113,107,960 (+)NCBI
mRatBN7.26107,277,463 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_039112658   ⟹   XP_038968586
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,005,333 - 113,107,960 (+)NCBI
mRatBN7.26107,277,259 - 107,377,057 (+)NCBI
RefSeq Acc Id: XM_063262230   ⟹   XP_063118300
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,019,825 - 113,107,960 (+)NCBI
RefSeq Acc Id: XM_063262231   ⟹   XP_063118301
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86113,050,626 - 113,107,960 (+)NCBI
RefSeq Acc Id: NP_001102455   ⟸   NM_001108985
- Peptide Label: isoform 2
- UniProtKB: D3ZRJ0 (UniProtKB/TrEMBL),   A6JEB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000016962   ⟸   ENSRNOT00000016962
RefSeq Acc Id: XP_038968586   ⟸   XM_039112658
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968579   ⟸   XM_039112651
- Peptide Label: isoform X1
- UniProtKB: A0A8I5Y874 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968585   ⟸   XM_039112657
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968583   ⟸   XM_039112655
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038968581   ⟸   XM_039112653
- Peptide Label: isoform X2
RefSeq Acc Id: ENSRNOP00000078150   ⟸   ENSRNOT00000104832
RefSeq Acc Id: NP_001386677   ⟸   NM_001399748
- Peptide Label: isoform 1
- UniProtKB: A0A8I5Y874 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001386678   ⟸   NM_001399749
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001386679   ⟸   NM_001399750
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001386676   ⟸   NM_001399747
- Peptide Label: isoform 1
- UniProtKB: A0A8I5Y874 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118300   ⟸   XM_063262230
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063118301   ⟸   XM_063262231
- Peptide Label: isoform X4
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZRJ0-F1-model_v2 AlphaFold D3ZRJ0 1-455 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694763
Promoter ID:EPDNEW_R5287
Type:single initiation site
Name:Adck1_1
Description:aarF domain containing kinase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.06111,642,455 - 111,642,515EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308263 AgrOrtholog
BioCyc Gene G2FUF-36688 BioCyc
Ensembl Genes ENSRNOG00000012685 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016962 ENTREZGENE
  ENSRNOT00000016962.6 UniProtKB/TrEMBL
  ENSRNOT00000104832 ENTREZGENE
  ENSRNOT00000104832.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro ABC_1 UniProtKB/TrEMBL
  ADCK1_dom UniProtKB/TrEMBL
  Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
KEGG Report rno:366698 UniProtKB/TrEMBL
NCBI Gene 366698 ENTREZGENE
PANTHER AARF DOMAIN-CONTAINING PROTEIN KINASE 1 UniProtKB/TrEMBL
  ABC1 FAMILY PROTEIN UniProtKB/TrEMBL
Pfam ABC1 UniProtKB/TrEMBL
PhenoGen Adck1 PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012685 RatGTEx
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A0A8I5Y874 ENTREZGENE, UniProtKB/TrEMBL
  A6JEB5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZRJ0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Adck1  aarF domain containing kinase 1   Adck1_predicted  aarF domain containing kinase 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Adck1_predicted  aarF domain containing kinase 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED