Irx3 (iroquois homeobox 3) - Rat Genome Database

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Gene: Irx3 (iroquois homeobox 3) Rattus norvegicus
Analyze
Symbol: Irx3
Name: iroquois homeobox 3
RGD ID: 1307424
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including His-Purkinje system development; kidney development; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within mesoderm development; negative regulation of neuron differentiation; and positive regulation of neuron differentiation. Predicted to be located in axon; cytoplasm; and nucleus. Orthologous to human IRX3 (iroquois homeobox 3); INTERACTS WITH atrazine; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Iroquois related homeobox 3; Iroquois related homeobox 3 (Drosophila) ; iroquois-class homeodomain protein IRX-3; LOC307721
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81931,384,803 - 31,388,241 (+)NCBIGRCr8
mRatBN7.21915,211,882 - 15,215,317 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1915,211,878 - 15,215,317 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1916,902,097 - 16,905,213 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01922,096,906 - 22,100,022 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01925,042,791 - 25,045,908 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01915,838,714 - 15,842,135 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1915,838,714 - 15,840,990 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01926,917,882 - 26,921,326 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41916,345,179 - 16,347,455 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11916,349,206 - 16,352,281 (+)NCBI
Celera1915,124,412 - 15,126,688 (+)NCBICelera
Cytogenetic Map19p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-palmitoylglycerol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
atrazine  (EXP)
avobenzone  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
butan-1-ol  (ISO)
C60 fullerene  (EXP)
cadmium dichloride  (EXP)
caffeine  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
formaldehyde  (ISO)
furan  (EXP)
hydralazine  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
Monobutylphthalate  (EXP,ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-nitrosodiethylamine  (ISO)
nicotine  (ISO)
nitrofen  (EXP)
oxaliplatin  (EXP)
panobinostat  (ISO)
perfluorohexanesulfonic acid  (ISO)
pirinixic acid  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium dodecyl sulfate  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
topotecan  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
axon  (ISO)
cytoplasm  (ISO)
nucleus  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Interaction between transcription factors Iroquois proteins 4 and 5 controls cardiac potassium channel Kv4.2 gene transcription. He W, etal., Cardiovasc Res. 2009 Jan 1;81(1):64-71. doi: 10.1093/cvr/cvn259. Epub 2008 Sep 24.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10830170   PMID:11124112   PMID:16100003   PMID:17875669   PMID:19666821   PMID:24646999   PMID:28179100  


Genomics

Comparative Map Data
Irx3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81931,384,803 - 31,388,241 (+)NCBIGRCr8
mRatBN7.21915,211,882 - 15,215,317 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1915,211,878 - 15,215,317 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1916,902,097 - 16,905,213 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01922,096,906 - 22,100,022 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01925,042,791 - 25,045,908 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01915,838,714 - 15,842,135 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1915,838,714 - 15,840,990 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01926,917,882 - 26,921,326 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41916,345,179 - 16,347,455 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11916,349,206 - 16,352,281 (+)NCBI
Celera1915,124,412 - 15,126,688 (+)NCBICelera
Cytogenetic Map19p11NCBI
IRX3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381654,283,304 - 54,286,787 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1654,283,304 - 54,286,787 (-)EnsemblGRCh38hg38GRCh38
GRCh371654,317,216 - 54,320,699 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361652,874,713 - 52,877,879 (-)NCBINCBI36Build 36hg18NCBI36
Build 341652,874,712 - 52,877,879NCBI
Celera1638,831,683 - 38,834,849 (-)NCBICelera
Cytogenetic Map16q12.2NCBI
HuRef1640,203,767 - 40,206,921 (-)NCBIHuRef
CHM1_11655,724,203 - 55,727,369 (-)NCBICHM1_1
T2T-CHM13v2.01660,081,297 - 60,084,780 (-)NCBIT2T-CHM13v2.0
Irx3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39892,525,139 - 92,528,282 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl892,525,153 - 92,528,695 (-)EnsemblGRCm39 Ensembl
GRCm38891,798,511 - 91,801,654 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl891,798,525 - 91,802,067 (-)EnsemblGRCm38mm10GRCm38
MGSCv37894,322,424 - 94,325,273 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36894,687,653 - 94,690,502 (-)NCBIMGSCv36mm8
Celera896,103,077 - 96,105,918 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map844.55NCBI
Irx3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543311,944,890 - 11,948,369 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543311,944,890 - 11,948,372 (-)NCBIChiLan1.0ChiLan1.0
IRX3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21863,708,015 - 63,712,146 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11669,626,818 - 69,630,821 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01634,514,107 - 34,517,576 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11653,622,028 - 53,627,033 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1653,622,409 - 53,624,653 (-)Ensemblpanpan1.1panPan2
IRX3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1261,555,608 - 61,559,185 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl261,555,492 - 61,558,958 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha258,190,062 - 58,192,778 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0262,094,083 - 62,096,798 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl262,094,083 - 62,096,571 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1258,923,158 - 58,925,876 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0259,949,850 - 59,952,564 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0260,825,325 - 60,828,040 (+)NCBIUU_Cfam_GSD_1.0
Irx3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934952,775,883 - 52,778,397 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364756,810,666 - 6,813,192 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364756,810,678 - 6,813,186 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IRX3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl631,046,146 - 31,049,054 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1631,044,919 - 31,049,067 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2628,167,076 - 28,171,233 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IRX3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1540,064,471 - 40,069,630 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl540,066,008 - 40,068,505 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604736,306,655 - 36,310,144 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Irx3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247572,543,992 - 2,547,464 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247572,543,968 - 2,547,452 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Irx3
17 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:39
Count of miRNA genes:38
Interacting mature miRNAs:39
Transcripts:ENSRNOT00000015583
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032318023069265Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat

Markers in Region
AI894186  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21915,213,514 - 15,213,658 (-)MAPPERmRatBN7.2
Rnor_6.01915,840,373 - 15,840,516NCBIRnor6.0
Rnor_5.01926,919,541 - 26,919,684UniSTSRnor5.0
RGSC_v3.41916,345,653 - 16,345,796UniSTSRGSC3.4
Celera1915,124,886 - 15,125,029UniSTS
Cytogenetic Map19p11UniSTS
RH139880  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21915,215,002 - 15,215,182 (-)MAPPERmRatBN7.2
Rnor_6.01915,838,849 - 15,839,028NCBIRnor6.0
Rnor_5.01926,918,017 - 26,918,196UniSTSRnor5.0
RGSC_v3.41916,347,141 - 16,347,320UniSTSRGSC3.4
Celera1915,126,374 - 15,126,553UniSTS
Cytogenetic Map19p11UniSTS
Irx3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21915,213,322 - 15,213,402 (-)MAPPERmRatBN7.2
Rnor_6.01915,840,629 - 15,840,708NCBIRnor6.0
Rnor_5.01926,919,797 - 26,919,876UniSTSRnor5.0
Celera1915,124,694 - 15,124,773UniSTS
Cytogenetic Map19p11UniSTS
Irx3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21915,213,809 - 15,215,312 (-)MAPPERmRatBN7.2
Rnor_6.01915,838,719 - 15,840,221NCBIRnor6.0
Rnor_5.01926,917,887 - 26,919,389UniSTSRnor5.0
Celera1915,125,181 - 15,126,683UniSTS
Cytogenetic Map19p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 16 29 24 12 11
Low 1 27 19 6 5 6 5 8 33 11 15 5
Below cutoff 2 17 14 7 14 3 3 10 7 3

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000015583   ⟹   ENSRNOP00000015583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1915,211,878 - 15,215,317 (+)Ensembl
Rnor_6.0 Ensembl1915,838,714 - 15,840,990 (-)Ensembl
RefSeq Acc Id: NM_001395133   ⟹   NP_001382062
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81931,385,118 - 31,388,241 (+)NCBI
mRatBN7.21915,212,194 - 15,215,317 (+)NCBI
RefSeq Acc Id: XM_006255192   ⟹   XP_006255254
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81931,384,803 - 31,387,902 (+)NCBI
mRatBN7.21915,211,882 - 15,214,978 (+)NCBI
Rnor_6.01915,839,053 - 15,842,135 (-)NCBI
Rnor_5.01926,917,882 - 26,921,326 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001382062 (Get FASTA)   NCBI Sequence Viewer  
  XP_006255254 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL87557 (Get FASTA)   NCBI Sequence Viewer  
  EDL87558 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000015583
  ENSRNOP00000015583.5
Reference Protein Sequences
RefSeq Acc Id: XP_006255254   ⟸   XM_006255192
- Peptide Label: isoform X1
- UniProtKB: D3ZNE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000015583   ⟸   ENSRNOT00000015583
RefSeq Acc Id: NP_001382062   ⟸   NM_001395133
- UniProtKB: A6KD68 (UniProtKB/TrEMBL)
Protein Domains
Homeobox

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZNE0-F1-model_v2 AlphaFold D3ZNE0 1-326 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307424 AgrOrtholog
BioCyc Gene G2FUF-6366 BioCyc
Ensembl Genes ENSRNOG00000011533 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000015583.6 UniProtKB/TrEMBL
Gene3D-CATH Homeodomain-like UniProtKB/TrEMBL
InterPro Homeobox_CS UniProtKB/TrEMBL
  Homeobox_KN_domain UniProtKB/TrEMBL
  Homeodomain UniProtKB/TrEMBL
  Homeodomain-like UniProtKB/TrEMBL
  Iroquois_homeo UniProtKB/TrEMBL
NCBI Gene 307721 ENTREZGENE
PANTHER IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX UniProtKB/TrEMBL
  IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX-3 UniProtKB/TrEMBL
Pfam Homeobox_KN UniProtKB/TrEMBL
PhenoGen Irx3 PhenoGen
PROSITE HOMEOBOX_1 UniProtKB/TrEMBL
  HOMEOBOX_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011533 RatGTEx
SMART HOX UniProtKB/TrEMBL
  IRO UniProtKB/TrEMBL
Superfamily-SCOP Homeodomain_like UniProtKB/TrEMBL
UniProt A6KD68 ENTREZGENE, UniProtKB/TrEMBL
  D3ZNE0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-26 Irx3  iroquois homeobox 3  Irx3  Iroquois related homeobox 3 (Drosophila)   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Irx3  Iroquois related homeobox 3 (Drosophila)   Irx3_predicted  Iroquois related homeobox 3 (Drosophila) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Irx3_predicted  Iroquois related homeobox 3 (Drosophila) (predicted)      Symbol and Name status set to approved 70820 APPROVED