Rpl10l (ribosomal protein L10 like) - Rat Genome Database

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Gene: Rpl10l (ribosomal protein L10 like) Rattus norvegicus
Analyze
Symbol: Rpl10l
Name: ribosomal protein L10 like
RGD ID: 1305913
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including male meiosis I; ribosomal large subunit assembly; and spermatogenesis. Predicted to be located in several cellular components, including cytosol; endoplasmic reticulum; and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in spermatogenic failure 63. Orthologous to human RPL10L (ribosomal protein L10 like); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-Tetrachlorodibenzofuran; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 60S ribosomal protein L10-like; LOC299106; ribosomal protein L10 like 1; ribosomal protein L10-like; Rpl10l1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8690,280,962 - 90,281,982 (-)NCBIGRCr8
mRatBN7.2684,544,771 - 84,545,791 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl684,543,540 - 84,545,816 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx684,906,496 - 84,907,516 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0685,205,875 - 85,206,895 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0684,646,915 - 84,647,935 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0688,231,273 - 88,232,549 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl688,231,611 - 88,232,252 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0697,714,374 - 97,715,479 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4687,930,206 - 87,930,850 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1687,933,655 - 87,934,326 (-)NCBI
Celera683,085,786 - 83,087,061 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rpl10lRatBrain-Lung-Thyroid Syndrome  ISORPL10L (Homo sapiens)8554872ClinVar Annotator: match by term: Brain-lung-thyroid syndromeClinVarPMID:25741868
Rpl10lRatIntellectual Developmental Disorder with Dysmorphic Facies and Ptosis  ISORPL10L (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual developmental disorder with dysmorphic facies and ptosisClinVar 
Rpl10lRatprostate cancer  ISORPL10L (Homo sapiens)8554872ClinVar Annotator: match by term: Malignant tumor of prostateClinVarPMID:23265383
Rpl10lRatspermatogenic failure 4  ISORPL10L (Homo sapiens)8554872ClinVar Annotator: match by term: Spermatogenesis maturation arrestClinVarPMID:32111475
Rpl10lRatspermatogenic failure 63  ISORPL10L (Homo sapiens)8554872ClinVar Annotator: match by term: Spermatogenic failure 63ClinVarPMID:32111475
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rpl10lRatspermatogenic failure 63  ISORPL10L (Homo sapiens)7240710 OMIM 

1 to 20 of 22 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rpl10lRat1,2-dimethylhydrazine multiple interactionsEXP 6480464[APC protein affects the susceptibility to 1 and 2-Dimethylhydrazine] which results in decreased expression of RPL10L mRNACTDPMID:27840820
Rpl10lRat2,3,7,8-Tetrachlorodibenzofuran increases expressionEXP 64804642 more ...CTDPMID:32109520
Rpl10lRatammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of RPL10L mRNACTDPMID:16483693
Rpl10lRatbenzo[a]pyrene increases expressionEXP 6480464Benzo(a)pyrene results in increased expression of RPL10L mRNACTDPMID:21839799
Rpl10lRatbenzo[a]pyrene decreases methylationISORPL10L (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of RPL10L exonCTDPMID:27901495
Rpl10lRatbisphenol A affects expressionEXP 6480464bisphenol A affects the expression of RPL10L mRNACTDPMID:25181051
Rpl10lRatbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of RPL10L mRNACTDPMID:35192832
Rpl10lRatbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of RPL10L mRNACTDPMID:32145629
Rpl10lRatCuprizon affects expressionEXP 6480464Cuprizone affects the expression of RPL10L mRNACTDPMID:27523638
Rpl10lRatcyclosporin A increases expressionISORPL10L (Homo sapiens)6480464Cyclosporine results in increased expression of RPL10L mRNACTDPMID:20106945
Rpl10lRatdisodium selenite increases expressionISORPL10L (Homo sapiens)6480464Sodium Selenite results in increased expression of RPL10L mRNACTDPMID:18175754
Rpl10lRatflutamide decreases expressionEXP 6480464Flutamide results in decreased expression of RPL10L mRNACTDPMID:24793618
Rpl10lRatlead diacetate increases expressionEXP 6480464lead acetate results in increased expression of RPL10L mRNACTDPMID:22641619
Rpl10lRatparacetamol decreases expressionEXP 6480464Acetaminophen results in decreased expression of RPL10L mRNACTDPMID:33387578
Rpl10lRatperfluorohexanesulfonic acid decreases expressionISORPL10L (Homo sapiens)6480464perfluorohexanesulfonic acid results in decreased expression of RPL10L mRNACTDPMID:25812627
Rpl10lRatperfluorononanoic acid decreases expressionISORPL10L (Homo sapiens)6480464perfluoro-n-nonanoic acid results in decreased expression of RPL10L mRNACTDPMID:25812627
Rpl10lRatperfluorooctane-1-sulfonic acid decreases expressionISORPL10L (Homo sapiens)6480464perfluorooctane sulfonic acid results in decreased expression of RPL10L mRNACTDPMID:25812627
Rpl10lRatperfluorooctanoic acid decreases expressionISORPL10L (Homo sapiens)6480464perfluorooctanoic acid results in decreased expression of RPL10L mRNACTDPMID:25812627
Rpl10lRatsodium arsenite decreases expressionISORpl10l (Mus musculus)6480464sodium arsenite results in decreased expression of RPL10L proteinCTDPMID:29044176
Rpl10lRatsodium arsenite increases expressionISORpl10l (Mus musculus)6480464sodium arsenite results in increased expression of RPL10L mRNACTDPMID:37682722

1 to 20 of 22 rows

Biological Process
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rpl10lRatmale meiosis I involved_inIBAMGI:3647985 and PANTHER:PTN0042967271600115GO_REF:0000033GO_CentralGO_REF:0000033
Rpl10lRatmale meiosis I involved_inISORpl10l (Mus musculus)1624291 PMID:28502657RGDPMID:28502657
Rpl10lRatmale meiosis I involved_inIEAUniProtKB:P86048 and ensembl:ENSMUSP000001007951600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatribosomal large subunit assembly involved_inISORpl10l (Mus musculus)1624291 PMID:28502657RGDPMID:28502657
Rpl10lRatribosomal large subunit assembly involved_inIEAUniProtKB:P86048 and ensembl:ENSMUSP000001007951600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatspermatogenesis involved_inISORpl10l (Mus musculus)1624291 PMID:28502657RGDPMID:28502657
Rpl10lRatspermatogenesis involved_inIEAUniProtKB:P86048 and ensembl:ENSMUSP000001007951600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatspermatogenesis involved_inIEAUniProtKB:Q96L21 and ensembl:ENSP000002982831600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatspermatogenesis involved_inISORPL10L (Homo sapiens)1624291 PMID:12490704 and PMID:32111475RGDPMID:12490704 and PMID:32111475
Rpl10lRatspermatogenesis involved_inIBAMGI:3647985 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Rpl10lRattranslation involved_inIBAPANTHER:PTN000197715 and SGD:S0000040651600115GO_REF:0000033GO_CentralGO_REF:0000033
Rpl10lRattranslation involved_inIEAInterPro:IPR001197 more ...1600115GO_REF:0000002InterProGO_REF:0000002
1 to 12 of 12 rows

Cellular Component
1 to 17 of 17 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Rpl10lRatcytosol located_inISORPL10L (Homo sapiens)1624291 RGDGO_REF:0000052
Rpl10lRatcytosol located_inIEAUniProtKB:Q96L21 and ensembl:ENSP000002982831600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatcytosolic large ribosomal subunit part_ofISORPL10L (Homo sapiens)1624291 PMID:25901680 and PMID:32669547RGDPMID:25901680 and PMID:32669547
Rpl10lRatcytosolic large ribosomal subunit part_ofIBAMGI:105943 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Rpl10lRatcytosolic large ribosomal subunit part_ofISORpl10l (Mus musculus)1624291 PMID:23500592 and PMID:36517592RGDPMID:23500592 and PMID:36517592
Rpl10lRatcytosolic large ribosomal subunit part_ofIEAARBA:ARBA000335391600115GO_REF:0000117UniProtGO_REF:0000117
Rpl10lRatcytosolic large ribosomal subunit part_ofIEAUniProtKB:P86048 and ensembl:ENSMUSP000001007951600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatcytosolic large ribosomal subunit part_ofIEAUniProtKB:Q96L21 and ensembl:ENSP000002982831600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatendoplasmic reticulum located_inIEAUniProtKB:Q96L21 and ensembl:ENSP000002982831600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatendoplasmic reticulum located_inISORPL10L (Homo sapiens)1624291 RGDGO_REF:0000052
Rpl10lRatnucleus located_inIEAUniProtKB:Q96L21 and ensembl:ENSP000002982831600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatnucleus located_inISORPL10L (Homo sapiens)1624291 RGDGO_REF:0000054
Rpl10lRatribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-06871600115GO_REF:0000043UniProtGO_REF:0000043
Rpl10lRatribosome part_ofISORPL10L (Homo sapiens)1624291 PMID:25901680RGDPMID:25901680
Rpl10lRatribosome part_ofIEAUniProtKB:Q96L21 and ensembl:ENSP000002982831600115GO_REF:0000107EnsemblGO_REF:0000107
Rpl10lRatribosome located_inIEAInterPro:IPR001197 more ...1600115GO_REF:0000002InterProGO_REF:0000002
Rpl10lRatribosome located_inIEAUniProtKB-KW:KW-06891600115GO_REF:0000043UniProtGO_REF:0000043
1 to 17 of 17 rows

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12490704   PMID:19946888   PMID:21630459   PMID:23500592  



Rpl10l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8690,280,962 - 90,281,982 (-)NCBIGRCr8
mRatBN7.2684,544,771 - 84,545,791 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl684,543,540 - 84,545,816 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx684,906,496 - 84,907,516 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0685,205,875 - 85,206,895 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0684,646,915 - 84,647,935 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0688,231,273 - 88,232,549 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl688,231,611 - 88,232,252 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0697,714,374 - 97,715,479 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4687,930,206 - 87,930,850 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1687,933,655 - 87,934,326 (-)NCBI
Celera683,085,786 - 83,087,061 (-)NCBICelera
Cytogenetic Map6q24NCBI
RPL10L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381446,651,010 - 46,651,781 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1446,651,010 - 46,651,781 (-)EnsemblGRCh38hg38GRCh38
GRCh371447,120,213 - 47,120,984 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361446,189,966 - 46,190,778 (-)NCBINCBI36Build 36hg18NCBI36
Build 341446,189,971 - 46,190,778NCBI
Celera1426,980,729 - 26,981,541 (-)NCBICelera
Cytogenetic Map14q21.2NCBI
HuRef1427,238,030 - 27,238,842 (-)NCBIHuRef
CHM1_11447,059,057 - 47,059,869 (-)NCBICHM1_1
T2T-CHM13v2.01440,849,826 - 40,850,597 (-)NCBIT2T-CHM13v2.0
Rpl10l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391266,330,153 - 66,331,175 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1266,330,153 - 66,331,175 (-)EnsemblGRCm39 Ensembl
GRCm381266,283,379 - 66,284,401 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1266,283,379 - 66,284,401 (-)EnsemblGRCm38mm10GRCm38
MGSCv371267,384,366 - 67,385,388 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361267,201,984 - 67,203,006 (-)NCBIMGSCv36mm8
Celera1267,414,601 - 67,415,626 (-)NCBICelera
Cytogenetic Map12C2NCBI
cM Map1227.44NCBI
Rpl10l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540915,612,198 - 15,612,842 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540915,612,118 - 15,613,056 (+)NCBIChiLan1.0ChiLan1.0
RPL10L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21547,796,895 - 47,799,297 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11447,013,404 - 47,015,806 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01427,254,150 - 27,255,381 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11445,564,997 - 45,565,806 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1445,565,079 - 45,565,723 (-)Ensemblpanpan1.1panPan2
RPL10L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1823,671,961 - 23,673,085 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl823,672,388 - 23,673,032 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha823,490,753 - 23,491,877 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0823,839,122 - 23,840,246 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl823,839,549 - 23,840,193 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1823,497,887 - 23,499,011 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0823,566,395 - 23,567,518 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0823,895,275 - 23,896,399 (-)NCBIUU_Cfam_GSD_1.0
Rpl10l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864055,712,572 - 55,713,407 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365832,975,604 - 2,976,248 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365832,975,604 - 2,976,248 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPL10L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1176,603,248 - 176,603,892 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11176,603,177 - 176,604,116 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21196,774,230 - 196,775,074 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPL10L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12423,667,440 - 23,669,041 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2423,668,304 - 23,668,948 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605312,054,368 - 12,055,219 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl10l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473121,941,818 - 21,942,462 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473121,941,646 - 21,944,165 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Rpl10l
1 total Variants

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:88
Interacting mature miRNAs:90
Transcripts:ENSRNOT00000047597
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat

1 to 10 of 24 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 217 97 93 44 60 31


RefSeq Transcripts NM_001399664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003754181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000047597   ⟹   ENSRNOP00000040966
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl688,231,611 - 88,232,252 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117730   ⟹   ENSRNOP00000080665
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl684,543,540 - 84,545,816 (-)Ensembl
RefSeq Acc Id: NM_001399664   ⟹   NP_001386593
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8690,280,962 - 90,281,982 (-)NCBI
mRatBN7.2684,544,771 - 84,545,791 (-)NCBI
Protein RefSeqs NP_001386593 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000080665.1
  ENSRNOP00000102217
Ensembl Acc Id: ENSRNOP00000040966   ⟸   ENSRNOT00000047597
Ensembl Acc Id: ENSRNOP00000080665   ⟸   ENSRNOT00000117730
RefSeq Acc Id: NP_001386593   ⟸   NM_001399664
- UniProtKB: A0A8I6G4V0 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-D4A1P2-F1-model_v2 AlphaFold D4A1P2 1-214 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13694635
Promoter ID:EPDNEW_R5153
Type:initiation region
Name:Rpl10l_1
Description:ribosomal protein L10-like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0688,232,301 - 88,232,361EPDNEW


1 to 24 of 24 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-37297 BioCyc
Ensembl Genes ENSRNOG00000032720 Ensembl
  ENSRNOG00000067139 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000086327 ENTREZGENE
Ensembl Transcript ENSRNOT00000117730.1 UniProtKB/TrEMBL
  ENSRNOT00000156121 ENTREZGENE
Gene3D-CATH 3.30.60.300 UniProtKB/TrEMBL
  3.90.1170.10 UniProtKB/TrEMBL
InterPro Ribosomal_L10e UniProtKB/TrEMBL
  Ribosomal_L10e/L16 UniProtKB/TrEMBL
  Ribosomal_L10e/L16_sf UniProtKB/TrEMBL
  Ribosomal_L10e_CS UniProtKB/TrEMBL
  Ribosomal_uL16 UniProtKB/TrEMBL
NCBI Gene 299106 ENTREZGENE
PANTHER PTHR11726 UniProtKB/TrEMBL
Pfam Ribosomal_L16 UniProtKB/TrEMBL
PhenoGen Rpl10l PhenoGen
PIRSF Ribosomal_L10 UniProtKB/TrEMBL
PROSITE RIBOSOMAL_L10E UniProtKB/TrEMBL
RatGTEx ENSRNOG00000032720 RatGTEx
  ENSRNOG00000067139 RatGTEx
  ENSRNOG00000086327 RatGTEx
Superfamily-SCOP SSF54686 UniProtKB/TrEMBL
UniProt A0A8I6G4V0 ENTREZGENE, UniProtKB/TrEMBL
1 to 24 of 24 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-04-11 Rpl10l  ribosomal protein L10 like  Rpl10l1  ribosomal protein L10 like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-03-13 Rpl10l1  ribosomal protein L10 like 1  Rpl10l  ribosomal protein L10-like  Name and Symbol changed 629549 APPROVED
2022-06-02 Rpl10l  ribosomal protein L10-like  Rpl10l  ribosomal protein L10-like  Data merged from RGD:149736314 737654 PROVISIONAL
2021-08-09 Rpl10l  ribosomal protein L10-like      Symbol and Name status set to provisional 45752 PROVISIONAL
2008-04-30 Rpl10l  ribosomal protein L10-like   Rpl10l_predicted  ribosomal protein L10-like (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Rpl10l_predicted  ribosomal protein L10-like (predicted)      Symbol and Name status set to approved 70820 APPROVED