H2bw2l (H2B.W histone 2 like) - Rat Genome Database

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Gene: H2bw2l (H2B.W histone 2 like) Rattus norvegicus
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Symbol: H2bw2l
Name: H2B.W histone 2 like
RGD ID: 9462175
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: histone H2B type 1-B-like; histone H2B-like; late histone H2B.L4-like; LOC103690887; LOC679105; similar to histone 1, H2ba
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X105,062,527 - 105,063,153 (+)NCBIGRCr8
mRatBN7.2X100,270,252 - 100,271,157 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X107,584,573 - 107,585,146 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X107,463,615 - 107,464,186 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX101,103,832 - 101,104,405 (+)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_039100159   ⟹   XP_038956087
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X105,062,527 - 105,063,153 (+)NCBI
mRatBN7.2X100,270,252 - 100,271,157 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038956087 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_038956087   ⟸   XM_039100159


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1603 BioCyc
NCBI Gene LOC103690887 ENTREZGENE
PhenoGen H2bw2l PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 H2bw2l  H2B.W histone 2 like  LOC103690887  late histone H2B.L4-like  Symbol and Name Changed 1299863 APPROVED
2015-07-29 LOC103690887  late histone H2B.L4-like  LOC679105  similar to histone 1, H2ba  Data merged from RGD:1591887 737654 PROVISIONAL
2014-08-25 LOC103690887  late histone H2B.L4-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC679105  similar to histone 1, H2ba      Symbol and Name status set to provisional 70820 PROVISIONAL