LOC103690860 (melanoma-associated antigen B4-like) - Rat Genome Database

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Gene: LOC103690860 (melanoma-associated antigen B4-like) Rattus norvegicus
Analyze
Symbol: LOC103690860
Name: melanoma-associated antigen B4-like
RGD ID: 9431964
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC302760; similar to melanoma antigen family B, 4
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X58,321,269 - 58,322,000 (-)NCBIGRCr8
mRatBN7.2X54,350,973 - 54,351,704 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X58,754,821 - 58,755,552 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X110,193,142 - 110,194,154 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X76,864,318 - 76,865,330 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX54,864,825 - 54,865,556 (-)NCBICelera
Cytogenetic MapXq21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC103690860
2 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008773310   ⟹   XP_008771532
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X58,321,269 - 58,322,000 (-)NCBI
mRatBN7.2X54,350,973 - 54,351,704 (-)NCBI
Rnor_6.0X58,754,821 - 58,755,552 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008771532 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008771532   ⟸   XM_008773310
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2317 BioCyc
NCBI Gene LOC103690860 ENTREZGENE
PhenoGen LOC103690860 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 LOC103690860  melanoma-associated antigen B4-like  LOC302760  similar to melanoma antigen family B, 4  Data merged from RGD:1584986 737654 PROVISIONAL
2006-11-19 LOC302760  similar to melanoma antigen family B, 4      Symbol and Name status set to provisional 70820 PROVISIONAL