LOC103694347 (40S ribosomal protein S25 pseudogene) - Rat Genome Database

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Gene: LOC103694347 (40S ribosomal protein S25 pseudogene) Rattus norvegicus
Analyze
Symbol: LOC103694347
Name: 40S ribosomal protein S25 pseudogene
RGD ID: 9363365
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: 40S ribosomal protein S25-like; LOC100910505; LOC691316; similar to 40S ribosomal protein S25
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81964,828,761 - 64,829,606 (+)NCBIGRCr8
mRatBN7.21947,919,958 - 47,920,912 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01952,513,585 - 52,514,385 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01963,258,104 - 63,258,473 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41950,144,788 - 50,145,157 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1947,176,768 - 47,177,568 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in LOC103694347
6 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum insulin level (CMO:0000358)193383821455283146Rat
1358200Insglur2Insulin/glucose ratio QTL 24.1blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)193383821455283146Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)194434021455283277Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-5499 BioCyc
NCBI Gene LOC103694347 ENTREZGENE
PhenoGen LOC103694347 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 LOC103694347  40S ribosomal protein S25 pseudogene  LOC100910505  40S ribosomal protein S25-like  Data merged from RGD:6498473 737654 PROVISIONAL
2015-07-29 LOC103694347  40S ribosomal protein S25 pseudogene  LOC691316  similar to 40S ribosomal protein S25  Data merged from RGD:1585099 737654 PROVISIONAL
2014-08-25 LOC103694347  40S ribosomal protein S25 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC100910505  40S ribosomal protein S25-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC691316  similar to 40S ribosomal protein S25      Symbol and Name status set to provisional 70820 PROVISIONAL