LOC103692766 (histone H2A.Z pseudogene) - Rat Genome Database

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Gene: LOC103692766 (histone H2A.Z pseudogene) Rattus norvegicus
Analyze
Symbol: LOC103692766
Name: histone H2A.Z pseudogene
RGD ID: 9143397
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: histone H2A.Z-like; LOC100909681; LOC103695337; LOC689563; similar to H2A histone family, member Z
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr874,964,246 - 4,965,085 (+)NCBIGRCr8
mRatBN7.274,309,902 - 4,310,418 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.074,767,454 - 4,767,948 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.074,906,269 - 4,906,800 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.475,668,259 - 5,668,690 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera72,749,530 - 2,750,061 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC103692766
3 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7127829089Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7131962314Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134000259Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35198 BioCyc
NCBI Gene LOC103692766 ENTREZGENE
PhenoGen LOC103692766 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 LOC103692766  histone H2A.Z pseudogene  LOC103695337  histone H2A.Z pseudogene  Data merged from RGD:9342629 737654 PROVISIONAL
2015-07-29 LOC103692766  histone H2A.Z pseudogene  LOC100909681  histone H2A.Z-like  Data merged from RGD:6502390 737654 PROVISIONAL
2015-07-29 LOC103692766  histone H2A.Z pseudogene  LOC689563  similar to H2A histone family, member Z  Data merged from RGD:1591064 737654 PROVISIONAL
2014-08-25 LOC103692766  histone H2A.Z pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL
2014-08-25 LOC103695337  histone H2A.Z pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC100909681  histone H2A.Z-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC689563  similar to H2A histone family, member Z      Symbol and Name status set to provisional 70820 PROVISIONAL