Gene: Ankrd60 (ankyrin repeat domain 60) Rattus norvegicus |
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Analyze |
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Symbol: |
Ankrd60 |
Name: |
ankyrin repeat domain 60 |
RGD ID: |
9091054 |
Description: |
INTERACTS WITH bisphenol A; decabromodiphenyl ether; fenvalerate |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
ankyrin repeat domain-containing protein 60; LOC103691988; RGD1306979; uncharacterized LOC103691988 |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 182,784,062 - 182,793,852 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 162,365,158 - 162,376,491 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 162,364,896 - 162,375,596 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 3 | 171,650,406 - 171,743,614 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 177,710,222 - 177,716,208 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 164,458,938 - 164,463,116 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 164,341,203 - 164,370,399 (-) | NCBI | | | | | Celera | 3 | 161,562,684 - 161,643,447 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
Comparative Map Data
Ankrd60 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 182,784,062 - 182,793,852 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 162,365,158 - 162,376,491 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 162,364,896 - 162,375,596 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 3 | 171,650,406 - 171,743,614 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 177,710,222 - 177,716,208 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 164,458,938 - 164,463,116 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 164,341,203 - 164,370,399 (-) | NCBI | | | | | Celera | 3 | 161,562,684 - 161,643,447 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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ANKRD60 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 58,216,126 - 58,228,653 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 58,216,126 - 58,228,653 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 56,791,182 - 56,803,709 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 56,226,957 - 56,237,445 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 56,226,956 - 56,237,091 | NCBI | | | | | Celera | 20 | 53,533,993 - 53,544,127 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.32 | NCBI | | | | | HuRef | 20 | 53,576,194 - 53,586,700 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 56,695,034 - 56,705,541 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 59,997,151 - 60,009,656 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ankrd60 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 173,410,451 - 173,420,066 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 173,410,454 - 173,420,134 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 173,568,658 - 173,578,273 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 173,568,666 - 173,578,365 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 173,568,661 - 173,578,341 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 173,394,165 - 173,403,842 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 173,211,603 - 173,221,280 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 179,537,234 - 179,546,880 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H4 | NCBI | | | | | cM Map | 2 | 97.04 | NCBI | | | | |
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Ankrd60 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955445 | 1,311,078 - 1,320,906 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ANKRD60 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 63,971,445 - 63,984,028 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 63,964,565 - 63,977,148 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 54,559,780 - 54,572,357 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 55,837,475 - 55,847,379 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 55,837,475 - 55,847,385 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ANKRD60 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 43,014,348 - 43,026,010 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 42,261,316 - 42,272,056 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 43,880,240 - 43,890,996 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 24 | 42,982,937 - 42,993,487 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 43,103,748 - 43,114,288 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 43,762,189 - 43,772,752 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ankrd60 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ANKRD60 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 58,425,081 - 58,434,669 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 58,425,165 - 58,434,669 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 65,636,737 - 65,646,243 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ANKRD60 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 5,903,122 - 5,913,402 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 5,903,289 - 5,912,999 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 53,957,657 - 53,967,697 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ankrd60 (Heterocephalus glaber - naked mole-rat) |
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QTLs in Region (mRatBN7.2)
70216 | Cm14 | Cardiac mass QTL 14 | 2.1 | | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 31172320 | 163586636 | Rat | 1559282 | Emca5 | Estrogen-induced mammary cancer QTL 5 | 3.9 | | mammary gland integrity trait (VT:0010552) | percentage of study population developing mammary tumors during a period of time (CMO:0000948) | 3 | 43827364 | 169034231 | Rat | 2312659 | Slep7 | Serum leptin concentration QTL 7 | | 0.001 | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 3 | 98535255 | 168026850 | Rat | 2312670 | Bw94 | Body weight QTL 94 | | 0.01 | inguinal fat pad mass (VT:0010424) | inguinal fat pad weight to body weight ratio (CMO:0001253) | 3 | 98535255 | 168026850 | Rat | 2312673 | Scl63 | Serum cholesterol level QTL 63 | | 0.001 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 3 | 98535255 | 168026850 | Rat | 1576306 | Schws3 | Schwannoma susceptibility QTL 3 | | 0.001 | nervous system integrity trait (VT:0010566) | percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) | 3 | 118839124 | 163839124 | Rat | 1598877 | Bp285 | Blood pressure QTL 285 | 1.5 | 0.03 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 120538241 | 165538241 | Rat | 10755461 | Coatc16 | Coat color QTL 16 | | | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 3 | 122438700 | 167438700 | Rat | 631541 | Bp81 | Blood pressure QTL 81 | 4 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 124122556 | 169034231 | Rat | 2303620 | Vencon4 | Ventilatory control QTL 4 | 3.9 | | respiration trait (VT:0001943) | tidal volume (CMO:0000222) | 3 | 127162703 | 168026850 | Rat | 1578656 | Vnigr2 | Vascular neointimal growth QTL 2 | 4.2 | | artery morphology trait (VT:0002191) | lesioned artery residual lumen area (CMO:0001417) | 3 | 130656562 | 169034231 | Rat | 1578653 | Vnigr3 | Vascular neointimal growth QTL 3 | 3.1 | | artery morphology trait (VT:0002191) | artery neointimal hyperplastic lesion area (CMO:0001414) | 3 | 130656562 | 169034231 | Rat | 9589106 | Insul23 | Insulin level QTL 23 | 13.86 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 3 | 131635904 | 169034231 | Rat | 2298477 | Eau4 | Experimental allergic uveoretinitis QTL 4 | | 0.0011 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 3 | 137398739 | 169034231 | Rat | 8552952 | Pigfal13 | Plasma insulin-like growth factor 1 level QTL 13 | | | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 3 | 138799500 | 169034231 | Rat | 1298068 | Bp167 | Blood pressure QTL 167 | | 0.004 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 141074471 | 169034231 | Rat | 2317883 | Alcrsp26 | Alcohol response QTL 26 | 1.8 | 0.63 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 3 | 145526770 | 169034231 | Rat | 12879871 | Am7 | Aortic mass QTL 7 | | 0.001 | aorta mass (VT:0002845) | aorta weight to aorta length to body weight ratio (CMO:0002722) | 3 | 145925360 | 166177555 | Rat | 12879872 | Cm97 | Cardiac mass QTL 97 | | 0.001 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 145925360 | 166177555 | Rat | 12879873 | Cm96 | Cardiac mass QTL 96 | | 0.001 | heart mass (VT:0007028) | heart wet weight to body weight ratio (CMO:0002408) | 3 | 145925360 | 166177555 | Rat | 12879874 | Cm98 | Cardiac mass QTL 98 | | 0.005 | heart right ventricle mass (VT:0007033) | heart right ventricle weight to body weight ratio (CMO:0000914) | 3 | 145925360 | 166177555 | Rat | 12879875 | Kidm64 | Kidney mass QTL 64 | | 0.001 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 145925360 | 166177555 | Rat | 12879876 | Bw182 | Body weight QTL 182 | | 0.003 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 145925360 | 166177555 | Rat | 2301411 | Bp320 | Blood pressure QTL 320 | | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 145925360 | 166177555 | Rat | 8552791 | Vie2 | Viral induced encephalitis QTL 2 | 4.1 | | brain integrity trait (VT:0010579) | encephalitis incidence/prevalence measurement (CMO:0002361) | 3 | 145956084 | 169034231 | Rat | 1578666 | Vnigr1 | Vascular neointimal growth QTL 1 | 4.6 | | artery morphology trait (VT:0002191) | artery lumen area (CMO:0001409) | 3 | 149040888 | 168026850 | Rat | 1300161 | Rf10 | Renal function QTL 10 | 3.57 | | renal blood flow trait (VT:2000006) | absolute change in renal vascular resistance (CMO:0001900) | 3 | 161192952 | 169034231 | Rat | |