Thpo (thrombopoietin) - Rat Genome Database

Name: Thpo
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Thpo (thrombopoietin) Chinchilla lanigera

Analyze

Symbol:

Thpo

Name:

thrombopoietin

RGD ID:

9060925

Description:

INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); megakaryocyte development (ortholog); megakaryocyte differentiation (ortholog); ASSOCIATED WITH 3-Methylcrotonyl-CoA carboxylase 1 deficiency (ortholog); aplastic anemia (ortholog); arteriosclerosis obliterans (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	THPO (thrombopoietin)	NCBI	Ortholog
Mus musculus (house mouse):	Thpo (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Thpo (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	THPO (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	THPO (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Thpo (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	THPO (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	THPO (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Thpo (thrombopoietin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	23,123,637 - 23,129,198 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-Methylcrotonyl-CoA carboxylase 1 deficiency (ISO)

aplastic anemia (ISO)

arteriosclerosis obliterans (ISO)

cardiomyopathy (ISO)

Chemical and Drug Induced Liver Injury (ISO)

Congenital Amegakaryocytic Thrombocytopenia 2 (ISO)

congenital disorder of glycosylation Id (ISO)

Currarino syndrome (ISO)

essential thrombocythemia (ISO)

genetic disease (ISO)

hemorrhagic disease (ISO)

liver cirrhosis (ISO)

pulmonary hypertension (ISO)

Stroke (ISO)

thrombocytopenia (ISO)

Thrombocytopenia 9 (ISO)

thrombocytosis (ISO)

toxic shock syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell surface receptor signaling pathway via STAT (ISO)

megakaryocyte development (ISO)

megakaryocyte differentiation (ISO)

myeloid cell differentiation (ISO)

positive regulation of cell population proliferation (ISO)

positive regulation of ERK1 and ERK2 cascade (ISO)

positive regulation of hematopoietic stem cell proliferation (ISO)

positive regulation of MAPK cascade (ISO)

positive regulation of megakaryocyte differentiation (ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ISO)

positive regulation of protein phosphorylation (ISO)

thrombopoietin-mediated signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Thpo
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	23,123,637 - 23,129,198 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI	ChiLan1.0	ChiLan1.0

THPO
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	184,371,935 - 184,379,688 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	184,371,935 - 184,381,968 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	184,089,723 - 184,097,476 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	185,572,467 - 185,578,626 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	185,572,474 - 185,578,634	NCBI
Celera	3	182,530,743 - 182,536,902 (-)	NCBI		Celera
Cytogenetic Map	3	q27.1	NCBI
HuRef	3	181,496,308 - 181,502,467 (-)	NCBI		HuRef
CHM1_1	3	184,054,230 - 184,060,389 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	187,181,188 - 187,188,943 (-)	NCBI		T2T-CHM13v2.0

Thpo
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	20,543,204 - 20,553,261 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	20,543,204 - 20,553,261 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	20,724,454 - 20,734,511 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	20,724,454 - 20,734,511 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	20,724,527 - 20,734,584 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	20,637,997 - 20,648,054 (-)	NCBI		MGSCv36	mm8
Celera	16	21,289,807 - 21,299,861 (-)	NCBI		Celera
Cytogenetic Map	16	B1	NCBI
cM Map	16	12.51	NCBI

Thpo
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2 Ensembl	11	80,182,820 - 80,188,167 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	11	82,845,676 - 82,853,439 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	82,848,853 - 82,852,425 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	11	83,868,655 - 83,873,910 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	85,925,385 - 85,932,532 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	82,412,552 - 82,417,807	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	11	79,022,653 - 79,027,908 (+)	NCBI		Celera
RH 3.4 Map	11		RGD
Cytogenetic Map	11	q23	NCBI

THPO
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	182,243,453 - 182,252,794 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	182,246,427 - 182,257,451 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	181,409,038 - 181,416,986 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	189,891,025 - 189,897,429 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	189,891,025 - 189,897,429 (-)	Ensembl	panpan1.1		panPan2

THPO
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	17,245,006 - 17,255,250 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	17,247,731 - 17,253,033 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	21,330,370 - 21,340,784 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	17,152,310 - 17,162,724 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	17,155,818 - 17,159,897 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	17,189,183 - 17,199,597 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	17,185,251 - 17,195,665 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	17,414,218 - 17,424,632 (-)	NCBI		UU_Cfam_GSD_1.0

Thpo
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	119,414,449 - 119,423,408 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936578	5,509,111 - 5,515,103 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936578	5,508,669 - 5,515,984 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

THPO
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	122,260,215 - 122,267,860 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	122,259,654 - 122,267,860 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	131,750,641 - 131,757,108 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

THPO
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	5,040,684 - 5,048,387 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666063	13,818,626 - 13,825,957 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Thpo
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	72,212,423 - 72,219,485 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	72,210,880 - 72,218,615 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005383308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005383309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005383310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01021227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01021228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01109659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000019922 ⟹ ENSCLAP00000019729

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955420	23,123,637 - 23,129,198 (+)	Ensembl

RefSeq Acc Id:

XM_005383308 ⟹ XP_005383365

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI

Sequence:

show sequence

CGCACGGAGGGGAGGAGAGGCGGGCCTGAAGCCCCCCTCTGCCGACAGCCACGGGTGGATAGAC
CAGGAGATGTGTGTCCAGCCTAAAACGGGATCCTCAGGCCGGGGAGGGGCAGAAGTTGGGCCTG
AGGCCTGGACCGGTCACTTAGGCGAGGACCCGATCCCTGCCTGAAGGATGAAGACTTGTCTTTA
AGGCCGACAGCTGATCCTTCCCTGACAGCACCCTTCTTCCTTTGGCCCTGGCTCTCACGCGTTC
ACATCCCTCCTGAGGATGCCTGCGCCGTAGAGCTCCCGGGACAGGGACTTGTCAGAAACAGGCA
GCCTTTCCCCCTCGGTGAGGTGACTGGGGTTTTCTTCTCCAAAGTAACTTGTCCTCAAAGCTAT
TCAACCATCACCCCTCACTGCCTCACCCTCTTCCTTCACCCCAGGACCGTCTTCCCCTCCAGCC
CACCCCCAACCTCCTTTGTCCTGGTTTCTGGTCATATTCCCTGTCCCCTCCCACCCCACTCCCC
CACCAGCCTCCCAGCTATCCCAGCACCCTCCTTCCTAATCTCAGGAGGCATCTCGTCTGGCTGA
ACTGGAGAATTCCGGGATCTAGGCCATCCTCCATAGCAGACAGCCCCATCCCTGGGATGAGGAA
CAGGAGAGAGCTTGGGAGGAGGCGGGGTGGTGTCAGGAGCCCCGAAGACTGAGACTGTGGGGAG
CCTGGGACTAAGGGGAAGGCCAAGGAGCCAGAGGCAAAGGACGAAGGCGGCCAGCAGGAGGTAT
TAGCTGGGGGAGGCCAGCAGCGGTCTTTTCTGAGACAGGAACACATGGGCACAGAGGCAAGTGG
CCTTAGCTGTCCAAGCCCCTGGGCCCCAGCAGGTCACCTGGCCAGCACATAGCTTTCACCTTCC
AGTCCCCTCAAACTGACTGCGCCCTTGTCCTATAACGTGAGCCCTCACAAAGAGATCGCTCTGT
ACAATAGACAATACCCAGATTTCCACGCAGAAAAGAGGAATGACAAGAGGCTCTCCTGGGGTGG
GGTGGAGTCCTGTTGGATTTTGACAGCAGATGTGCTGTCCAGGGAAAAGAAATTTGGATAGCCA
GGAACTGAAAACCCCACCAATCTAAAATAAGACCTCCATGGCTCTTCCCCAGGGATAAACACAT
ACTGCCAGATCTCTCCTGGACAAAACCTCTGCTCCCTTTCCCATCTCTTCCCCAGCCAGGTCCC
AAGATTCCAGCTCCCCGGGAAAAAAAGGATCCCCCTATGTAGATCTTCCCTGCGGTGTGTGTGG
GTGGAGGAGCTGGGCCTCATTAGTGGACCATGGTCCAGGGCAGGGGATCCAGGCCCAGCACGGG
TAGGAGGAGAAGGCGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGCTCTCTGCTCTCTGAT
TGGGCAGACGTGGCCGGGTCAGACGTGTGACCCCACTGCTGTGGAAGGGCTGTGCCCCAACGCC
ACATGTCTTCCTATTCATCTGCTCTCCAGAGAGCTGTCCACTGTGCACCTGGGCCCTTAAGCCC
TTCTCTACCTGGACAGATTCCAGACCTCTTCCTCGGCCCACCTGTGCCCCACCCCACTCTGCCC
AGAAGTGCAAGAGCCCAAGCCGCCTCCATGGCCCCAGGAAGGACTCGGGGGAGGGGTCCCATAA
AGGGAGCCGCTCCAGCCAGACACCCCAGCCAGAATGGAGCTGACTGATTTGCTCCAGGTGGTCC
TTCTTCTCCTCACTGCAAGACTAACTCTGTCCGGCTCAGCTCCACCTGCCTGTGACCCCCGGCT
CCTAAATAAACTGCTTCGTGACTCTCACGTCCTTCATAGCAGACTGAGCCAGTGCCCAGAAGTT
AACCCTTTATCCACACCCATCCTGCTGCCTGCTGTGGATTTTAGCTTGGGAGAATGGAAAGCCC
AGACGGAGCAGACCAAAGCACAGGACATTCTAGGAGCGGTGACCCTTCTACTGGAGGGAGTGAT
GGCAGCGCGGGGACAGCTGGGACCCACGTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGACAG
GTCCGCCTCCTCCTTGGGGCCCTGCAGGGCCTCCTGGGGACCCAGCTTCCTCCACAGGGCAGGA
CCACAGCTCACAAGGACCCCAACGCCATCTTCCTGAGCTTCCAGCAGCTCCTCCGAGGAAAGGT
GCGTTTCCTGCTGCTTGTAGGAGGGCCCACCCTCTGCGCCAGGCGGGCCCTGCCCACCACCGCT
GTCCCAAGCAGTCCCTCTCTGTTGCTCACACTAAACAAGCTCCCAAACAGGACTTCTGCGTTGC
TGGAGACGAACTCCAGCGTCTCAGCCAGAACTACTGGCTCTGGACTTCTGAACAGACGGCAGGG
ATTCGCAGCCAAGATTCCTGGTCTGCTGAATCAGACTTCCAGGTCTTCAGACCGAAGCCCTGGA
CACCTGGACAGGACACCAAGACCCTTGAACGGAACTCATGGACTCCTTCCTGGAGCTTCAGCCA
GGGCCCTGGAAGTTCCAGCCATTCCACCTGGAACTTTGGACACAGGCTTCCGGCCACCCCACCT
CCAGCCCGGATACTCTGCTTCCCCAGCCGCTCCTCCTGCTGGGCAGTGCACACTCTTCTCTCCT
TCGCCCACCTTGCCCACACCTGTGGTCCAGCTCCACCCCCTGCTTCCTGACCCTTCTGTGACAG
CCAACTCCAGCAGCCCTCCGCTACCCACATCCCACCCTCACTCCCAGAATGCATCTCAGGAAGG
GTAAGGTGCCCACGCACAGCCACACGGGAGGGCTCTGCCCGGCACCTGCAGCTCTACCCGATGC
CCTGCTTTTACCTGCAAGCCGAAGCGCTGGCAGAGGGGGAGGCCCAGGACAGAGATATTTTTTT
TTAAGCTATTGACAATATGTATTCATCAGAGCAGCTAGTTATCTTTGGTGTTTTCTGTGTAATT
TTGCAAATCACTAATTATCGATGTGCTCTTTTTCATGGTAACACTACAAAGGCTTGGCCTGGCC
TGCCTGGTCCTTGAATAGAGGTAGATTAACCTTGTGTCAGAAAA

hide sequence

RefSeq Acc Id:

XM_005383309 ⟹ XP_005383366

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI

Sequence:

show sequence

CGCACGGAGGGGAGGAGAGGCGGGCCTGAAGCCCCCCTCTGCCGACAGCCACGGGTGGATAGAC
CAGGAGATGTGTGTCCAGCCTAAAACGGGATCCTCAGGCCGGGGAGGGGCAGAAGTTGGGCCTG
AGGCCTGGACCGGTCACTTAGGCGAGGACCCGATCCCTGCCTGAAGGATGAAGACTTGTCTTTA
AGGCCGACAGCTGATCCTTCCCTGACAGCACCCTTCTTCCTTTGGCCCTGGCTCTCACGCGTTC
ACATCCCTCCTGAGGATGCCTGCGCCGTAGAGCTCCCGGGACAGGGACTTGTCAGAAACAGGCA
GCCTTTCCCCCTCGGTGAGGTGACTGGGGTTTTCTTCTCCAAAGTAACTTGTCCTCAAAGCTAT
TCAACCATCACCCCTCACTGCCTCACCCTCTTCCTTCACCCCAGGACCGTCTTCCCCTCCAGCC
CACCCCCAACCTCCTTTGTCCTGGTTTCTGGTCATATTCCCTGTCCCCTCCCACCCCACTCCCC
CACCAGCCTCCCAGCTATCCCAGCACCCTCCTTCCTAATCTCAGGAGGCATCTCGTCTGGCTGA
ACTGGAGAATTCCGGGATCTAGGCCATCCTCCATAGCAGACAGCCCCATCCCTGGGATGAGGAA
CAGGAGAGAGCTTGGGAGGAGGCGGGGTGGTGTCAGGAGCCCCGAAGACTGAGACTGTGGGGAG
CCTGGGACTAAGGGGAAGGCCAAGGAGCCAGAGGCAAAGGACGAAGGCGGCCAGCAGGAGGTAT
TAGCTGGGGGAGGCCAGCAGCGGTCTTTTCTGAGACAGGAACACATGGGCACAGAGGCAAGTGG
CCTTAGCTGTCCAAGCCCCTGGGCCCCAGCAGGTCACCTGGCCAGCACATAGCTTTCACCTTCC
AGTCCCCTCAAACTGACTGCGCCCTTGTCCTATAACGTGAGCCCTCACAAAGAGATCGCTCTGT
ACAATAGACAATACCCAGATTTCCACGCAGAAAAGAGGAATGACAAGAGGCTCTCCTGGGGTGG
GGTGGAGTCCTGTTGGATTTTGACAGCAGATGTGCTGTCCAGGGAAAAGAAATTTGGATAGCCA
GGAACTGAAAACCCCACCAATCTAAAATAAGACCTCCATGGCTCTTCCCCAGGGATAAACACAT
ACTGCCAGATCTCTCCTGGACAAAACCTCTGCTCCCTTTCCCATCTCTTCCCCAGCCAGGTCCC
AAGATTCCAGCTCCCCGGGAAAAAAAGGATCCCCCTATGTAGATCTTCCCTGCGGTGTGTGTGG
GTGGAGGAGCTGGGCCTCATTAGTGGACCATGGTCCAGGGCAGGGGATCCAGGCCCAGCACGGG
TAGGAGGAGAAGGCGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGCTCTCTGCTCTCTGAT
TGGGCAGACGTGGCCGGGTCAGACGTGTGACCCCACTGCTGTGGAAGGGCTGTGCCCCAACGCC
ACATGTCTTCCTATTCATCTGCTCTCCAGAGAGCTGTCCACTGTGCACCTGGGCCCTTAAGCCC
TTCTCTACCTGGACAGATTCCAGACCTCTTCCTCGGCCCACCTGTGCCCCACCCCACTCTGCCC
AGAAGTGCAAGAGCCCAAGCCGCCTCCATGGCCCCAGGAAGGACTCGGGGGAGGGGTCCCATAA
AGGGAGCCGCTCCAGCCAGACACCCCAGCCAGAATGGAGCTGACTGATTTGCTCCAGGTGGTCC
TTCTTCTCCTCACTGCAAGACTAACTCTGTCCGGCTCAGCTCCACCTGCCTGTGACCCCCGGCT
CCTAAATAAACTGCTTCGTGACTCTCACGTCCTTCATAGCAGACTGAGCCAGTGCCCAGAAGTT
AACCCTTTATCCACACCCATCCTGCTGCCTGCTGTGGATTTTAGCTTGGGAGAATGGAAAGCCC
AGACGGAGCAGACCAAAGCACAGGACATTCTAGGAGCGGTGACCCTTCTACTGGAGGGAGTGAT
GGCAGCGCGGGGACAGCTGGGACCCACGTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGACAG
GTCCGCCTCCTCCTTGGGGCCCTGCAGGGCCTCCTGGGGACCCAGGGCAGGACCACAGCTCACA
AGGACCCCAACGCCATCTTCCTGAGCTTCCAGCAGCTCCTCCGAGGAAAGGTGCGTTTCCTGCT
GCTTGTAGGAGGGCCCACCCTCTGCGCCAGGCGGGCCCTGCCCACCACCGCTGTCCCAAGCAGT
CCCTCTCTGTTGCTCACACTAAACAAGCTCCCAAACAGGACTTCTGCGTTGCTGGAGACGAACT
CCAGCGTCTCAGCCAGAACTACTGGCTCTGGACTTCTGAACAGACGGCAGGGATTCGCAGCCAA
GATTCCTGGTCTGCTGAATCAGACTTCCAGGTCTTCAGACCGAAGCCCTGGACACCTGGACAGG
ACACCAAGACCCTTGAACGGAACTCATGGACTCCTTCCTGGAGCTTCAGCCAGGGCCCTGGAAG
TTCCAGCCATTCCACCTGGAACTTTGGACACAGGCTTCCGGCCACCCCACCTCCAGCCCGGATA
CTCTGCTTCCCCAGCCGCTCCTCCTGCTGGGCAGTGCACACTCTTCTCTCCTTCGCCCACCTTG
CCCACACCTGTGGTCCAGCTCCACCCCCTGCTTCCTGACCCTTCTGTGACAGCCAACTCCAGCA
GCCCTCCGCTACCCACATCCCACCCTCACTCCCAGAATGCATCTCAGGAAGGGTAAGGTGCCCA
CGCACAGCCACACGGGAGGGCTCTGCCCGGCACCTGCAGCTCTACCCGATGCCCTGCTTTTACC
TGCAAGCCGAAGCGCTGGCAGAGGGGGAGGCCCAGGACAGAGATATTTTTTTTTAAGCTATTGA
CAATATGTATTCATCAGAGCAGCTAGTTATCTTTGGTGTTTTCTGTGTAATTTTGCAAATCACT
AATTATCGATGTGCTCTTTTTCATGGTAACACTACAAAGGCTTGGCCTGGCCTGCCTGGTCCTT
GAATAGAGGTAGATTAACCTTGTGTCAGAAAA

hide sequence

RefSeq Acc Id:

XM_005383310 ⟹ XP_005383367

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI

Sequence:

show sequence

CGCACGGAGGGGAGGAGAGGCGGGCCTGAAGCCCCCCTCTGCCGACAGCCACGGGTGGATAGAC
CAGGAGATGTGTGTCCAGCCTAAAACGGGATCCTCAGGCCGGGGAGGGGCAGAAGTTGGGCCTG
AGGCCTGGACCGGTCACTTAGGCGAGGACCCGATCCCTGCCTGAAGGATGAAGACTTGTCTTTA
AGGCCGACAGCTGATCCTTCCCTGACAGCACCCTTCTTCCTTTGGCCCTGGCTCTCACGCGTTC
ACATCCCTCCTGAGGATGCCTGCGCCGTAGAGCTCCCGGGACAGGGACTTGTCAGAAACAGGCA
GCCTTTCCCCCTCGGTGAGGTGACTGGGGTTTTCTTCTCCAAAGTAACTTGTCCTCAAAGCTAT
TCAACCATCACCCCTCACTGCCTCACCCTCTTCCTTCACCCCAGGACCGTCTTCCCCTCCAGCC
CACCCCCAACCTCCTTTGTCCTGGTTTCTGGTCATATTCCCTGTCCCCTCCCACCCCACTCCCC
CACCAGCCTCCCAGCTATCCCAGCACCCTCCTTCCTAATCTCAGGAGGCATCTCGTCTGGCTGA
ACTGGAGAATTCCGGGATCTAGGCCATCCTCCATAGCAGACAGCCCCATCCCTGGGATGAGGAA
CAGGAGAGAGCTTGGGAGGAGGCGGGGTGGTGTCAGGAGCCCCGAAGACTGAGACTGTGGGGAG
CCTGGGACTAAGGGGAAGGCCAAGGAGCCAGAGGCAAAGGACGAAGGCGGCCAGCAGGAGGTAT
TAGCTGGGGGAGGCCAGCAGCGGTCTTTTCTGAGACAGGAACACATGGGCACAGAGGCAAGTGG
CCTTAGCTGTCCAAGCCCCTGGGCCCCAGCAGGTCACCTGGCCAGCACATAGCTTTCACCTTCC
AGTCCCCTCAAACTGACTGCGCCCTTGTCCTATAACGTGAGCCCTCACAAAGAGATCGCTCTGT
ACAATAGACAATACCCAGATTTCCACGCAGAAAAGAGGAATGACAAGAGGCTCTCCTGGGGTGG
GGTGGAGTCCTGTTGGATTTTGACAGCAGATGTGCTGTCCAGGGAAAAGAAATTTGGATAGCCA
GGAACTGAAAACCCCACCAATCTAAAATAAGACCTCCATGGCTCTTCCCCAGGGATAAACACAT
ACTGCCAGATCTCTCCTGGACAAAACCTCTGCTCCCTTTCCCATCTCTTCCCCAGCCAGGTCCC
AAGATTCCAGCTCCCCGGGAAAAAAAGGATCCCCCTATGTAGATCTTCCCTGCGGTGTGTGTGG
GTGGAGGAGCTGGGCCTCATTAGTGGACCATGGTCCAGGGCAGGGGATCCAGGCCCAGCACGGG
TAGGAGGAGAAGGCGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGCTCTCTGCTCTCTGAT
TGGGCAGACGTGGCCGGGTCAGACGTGTGACCCCACTGCTGTGGAAGGGCTGTGCCCCAACGCC
ACATGTCTTCCTATTCATCTGCTCTCCAGAGAGCTGTCCACTGTGCACCTGGGCCCTTAAGCCC
TTCTCTACCTGGACAGATTCCAGACCTCTTCCTCGGCCCACCTGTGCCCCACCCCACTCTGCCC
AGAAGTGCAAGAGCCCAAGCCGCCTCCATGGCCCCAGGAAGGACTCGGGGGAGGGGTCCCATAA
AGGGAGCCGCTCCAGCCAGACACCCCAGCCAGAATGGAGCTGACTGATTTGCTCCAGGTGGTCC
TTCTTCTCCTCACTGCAAGACTAACTCTGTCCGGCTCAGCTCCACCTGCCTGTGACCCCCGGCT
CCTAAATAAACTGCTTCGTGACTCTCACGTCCTTCATAGCAGACTGAGCCAGTGCCCAGAAGTT
AACCCTTTATCCACACCCATCCTGCTGCCTGCTGTGGATTTTAGCTTGGGAGAATGGAAAGCCC
AGACGGAGCAGACCAAAGCACAGGACATTCTAGGAGCGGTGACCCTTCTACTGGAGGGAGTGAT
GGCAGCGCGGGGACAGCTGGGACCCACGTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGACAG
GTCCGCCTCCTCCTTGGGGCCCTGCAGGGCCTCCTGGGGACCCAGGACCACAGCTCACAAGGAC
CCCAACGCCATCTTCCTGAGCTTCCAGCAGCTCCTCCGAGGAAAGGTGCGTTTCCTGCTGCTTG
TAGGAGGGCCCACCCTCTGCGCCAGGCGGGCCCTGCCCACCACCGCTGTCCCAAGCAGTCCCTC
TCTGTTGCTCACACTAAACAAGCTCCCAAACAGGACTTCTGCGTTGCTGGAGACGAACTCCAGC
GTCTCAGCCAGAACTACTGGCTCTGGACTTCTGAACAGACGGCAGGGATTCGCAGCCAAGATTC
CTGGTCTGCTGAATCAGACTTCCAGGTCTTCAGACCGAAGCCCTGGACACCTGGACAGGACACC
AAGACCCTTGAACGGAACTCATGGACTCCTTCCTGGAGCTTCAGCCAGGGCCCTGGAAGTTCCA
GCCATTCCACCTGGAACTTTGGACACAGGCTTCCGGCCACCCCACCTCCAGCCCGGATACTCTG
CTTCCCCAGCCGCTCCTCCTGCTGGGCAGTGCACACTCTTCTCTCCTTCGCCCACCTTGCCCAC
ACCTGTGGTCCAGCTCCACCCCCTGCTTCCTGACCCTTCTGTGACAGCCAACTCCAGCAGCCCT
CCGCTACCCACATCCCACCCTCACTCCCAGAATGCATCTCAGGAAGGGTAAGGTGCCCACGCAC
AGCCACACGGGAGGGCTCTGCCCGGCACCTGCAGCTCTACCCGATGCCCTGCTTTTACCTGCAA
GCCGAAGCGCTGGCAGAGGGGGAGGCCCAGGACAGAGATATTTTTTTTTAAGCTATTGACAATA
TGTATTCATCAGAGCAGCTAGTTATCTTTGGTGTTTTCTGTGTAATTTTGCAAATCACTAATTA
TCGATGTGCTCTTTTTCATGGTAACACTACAAAGGCTTGGCCTGGCCTGCCTGGTCCTTGAATA
GAGGTAGATTAACCTTGTGTCAGAAAA

hide sequence

RefSeq Acc Id:

XM_013513327 ⟹ XP_013368781

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI

Sequence:

show sequence

CGCACGGAGGGGAGGAGAGGCGGGCCTGAAGCCCCCCTCTGCCGACAGCCACGGGTGGATAGAC
CAGGAGATGTGTGTCCAGCCTAAAACGGGATCCTCAGGCCGGGGAGGGGCAGAAGTTGGGCCTG
AGGCCTGGACCGGTCACTTAGGCGAGGACCCGATCCCTGCCTGAAGGATGAAGACTTGTCTTTA
AGGCCGACAGCTGATCCTTCCCTGACAGCACCCTTCTTCCTTTGGCCCTGGCTCTCACGCGTTC
ACATCCCTCCTGAGGATGCCTGCGCCGTAGAGCTCCCGGGACAGGGACTTGTCAGAAACAGGCA
GCCTTTCCCCCTCGGTGAGGTGACTGGGGTTTTCTTCTCCAAAGTAACTTGTCCTCAAAGCTAT
TCAACCATCACCCCTCACTGCCTCACCCTCTTCCTTCACCCCAGGACCGTCTTCCCCTCCAGCC
CACCCCCAACCTCCTTTGTCCTGGTTTCTGGTCATATTCCCTGTCCCCTCCCACCCCACTCCCC
CACCAGCCTCCCAGCTATCCCAGCACCCTCCTTCCTAATCTCAGGAGGCATCTCGTCTGGCTGA
ACTGGAGAATTCCGGGATCTAGGCCATCCTCCATAGCAGACAGCCCCATCCCTGGGATGAGGAA
CAGGAGAGAGCTTGGGAGGAGGCGGGGTGGTGTCAGGAGCCCCGAAGACTGAGACTGTGGGGAG
CCTGGGACTAAGGGGAAGGCCAAGGAGCCAGAGGCAAAGGACGAAGGCGGCCAGCAGGAGGTAT
TAGCTGGGGGAGGCCAGCAGCGGTCTTTTCTGAGACAGGAACACATGGGCACAGAGGCAAGTGG
CCTTAGCTGTCCAAGCCCCTGGGCCCCAGCAGGTCACCTGGCCAGCACATAGCTTTCACCTTCC
AGTCCCCTCAAACTGACTGCGCCCTTGTCCTATAACGTGAGCCCTCACAAAGAGATCGCTCTGT
ACAATAGACAATACCCAGATTTCCACGCAGAAAAGAGGAATGACAAGAGGCTCTCCTGGGGTGG
GGTGGAGTCCTGTTGGATTTTGACAGCAGATGTGCTGTCCAGGGAAAAGAAATTTGGATAGCCA
GGAACTGAAAACCCCACCAATCTAAAATAAGACCTCCATGGCTCTTCCCCAGGGATAAACACAT
ACTGCCAGATCTCTCCTGGACAAAACCTCTGCTCCCTTTCCCATCTCTTCCCCAGCCAGGTCCC
AAGATTCCAGCTCCCCGGGAAAAAAAGGATCCCCCTATGTAGATCTTCCCTGCGGTGTGTGTGG
GTGGAGGAGCTGGGCCTCATTAGTGGACCATGGTCCAGGGCAGGGGATCCAGGCCCAGCACGGG
TAGGAGGAGAAGGCGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGCTCTCTGCTCTCTGAT
TGGGCAGACGTGGCCGGGTCAGACGTGTGACCCCACTGCTGTGGAAGGGCTGTGCCCCAACGCC
ACATGTCTTCCTATTCATCTGCTCTCCAGAGAGCTGTCCACTGTGCACCTGGGCCCTTAAGCCC
TTCTCTACCTGGACAGATTCCAGACCTCTTCCTCGGCCCACCTGTGCCCCACCCCACTCTGCCC
AGAAGTGCAAGAGCCCAAGCCGCCTCCATGGCCCCAGGAAGGACTCGGGGGAGGGGTCCCATAA
AGGGAGCCGCTCCAGCCAGACACCCCAGCCAGAATGGAGCTGACTGATTTGCTCCAGGTGGTCC
TTCTTCTCCTCACTGCAAGACTAACTCTGTCCGGCTCAGCTCCACCTGCCTGTGACCCCCGGCT
CCTAAATAAACTGCTTCGTGACTCTCACGTCCTTCATAGCAGACTGAGCCAGTGCCCAGAAGTT
AACCCTTTATCCACACCCATCCTGCTGCCTGCTGTGGATTTTAGCTTGGGAGAATGGAAAGCCC
AGACGGAGCAGACCAAAGCACAGGACATTCTAGGAGCGGTGACCCTTCTACTGGAGGGAGTGAT
GGCAGCGCGGGGACAGCTGGGACCCACGTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGACAG
GTCCGCCTCCTCCTTGGGGCCCTGCAGGGCCTCCTGGGGACCCAGCTTCCTCCACAGGGCAGGA
CCACAGCTCACAAGGACCCCAACGCCATCTTCCTGAGCTTCCAGCAGCTCCTCCGAGGAAAGGA
CTTCTGCGTTGCTGGAGACGAACTCCAGCGTCTCAGCCAGAACTACTGGCTCTGGACTTCTGAA
CAGACGGCAGGGATTCGCAGCCAAGATTCCTGGTCTGCTGAATCAGACTTCCAGGTCTTCAGAC
CGAAGCCCTGGACACCTGGACAGGACACCAAGACCCTTGAACGGAACTCATGGACTCCTTCCTG
GAGCTTCAGCCAGGGCCCTGGAAGTTCCAGCCATTCCACCTGGAACTTTGGACACAGGCTTCCG
GCCACCCCACCTCCAGCCCGGATACTCTGCTTCCCCAGCCGCTCCTCCTGCTGGGCAGTGCACA
CTCTTCTCTCCTTCGCCCACCTTGCCCACACCTGTGGTCCAGCTCCACCCCCTGCTTCCTGACC
CTTCTGTGACAGCCAACTCCAGCAGCCCTCCGCTACCCACATCCCACCCTCACTCCCAGAATGC
ATCTCAGGAAGGGTAAGGTGCCCACGCACAGCCACACGGGAGGGCTCTGCCCGGCACCTGCAGC
TCTACCCGATGCCCTGCTTTTACCTGCAAGCCGAAGCGCTGGCAGAGGGGGAGGCCCAGGACAG
AGATATTTTTTTTTAAGCTATTGACAATATGTATTCATCAGAGCAGCTAGTTATCTTTGGTGTT
TTCTGTGTAATTTTGCAAATCACTAATTATCGATGTGCTCTTTTTCATGGTAACACTACAAAGG
CTTGGCCTGGCCTGCCTGGTCCTTGAATAGAGGTAGATTAACCTTGTGTCAGAAAA

hide sequence

RefSeq Acc Id:

XM_013513328 ⟹ XP_013368782

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI

Sequence:

show sequence

CGCACGGAGGGGAGGAGAGGCGGGCCTGAAGCCCCCCTCTGCCGACAGCCACGGGTGGATAGAC
CAGGAGATGTGTGTCCAGCCTAAAACGGGATCCTCAGGCCGGGGAGGGGCAGAAGTTGGGCCTG
AGGCCTGGACCGGTCACTTAGGCGAGGACCCGATCCCTGCCTGAAGGATGAAGACTTGTCTTTA
AGGCCGACAGCTGATCCTTCCCTGACAGCACCCTTCTTCCTTTGGCCCTGGCTCTCACGCGTTC
ACATCCCTCCTGAGGATGCCTGCGCCGTAGAGCTCCCGGGACAGGGACTTGTCAGAAACAGGCA
GCCTTTCCCCCTCGGTGAGGTGACTGGGGTTTTCTTCTCCAAAGTAACTTGTCCTCAAAGCTAT
TCAACCATCACCCCTCACTGCCTCACCCTCTTCCTTCACCCCAGGACCGTCTTCCCCTCCAGCC
CACCCCCAACCTCCTTTGTCCTGGTTTCTGGTCATATTCCCTGTCCCCTCCCACCCCACTCCCC
CACCAGCCTCCCAGCTATCCCAGCACCCTCCTTCCTAATCTCAGGAGGCATCTCGTCTGGCTGA
ACTGGAGAATTCCGGGATCTAGGCCATCCTCCATAGCAGACAGCCCCATCCCTGGGATGAGGAA
CAGGAGAGAGCTTGGGAGGAGGCGGGGTGGTGTCAGGAGCCCCGAAGACTGAGACTGTGGGGAG
CCTGGGACTAAGGGGAAGGCCAAGGAGCCAGAGGCAAAGGACGAAGGCGGCCAGCAGGAGGTAT
TAGCTGGGGGAGGCCAGCAGCGGTCTTTTCTGAGACAGGAACACATGGGCACAGAGGCAAGTGG
CCTTAGCTGTCCAAGCCCCTGGGCCCCAGCAGGTCACCTGGCCAGCACATAGCTTTCACCTTCC
AGTCCCCTCAAACTGACTGCGCCCTTGTCCTATAACGTGAGCCCTCACAAAGAGATCGCTCTGT
ACAATAGACAATACCCAGATTTCCACGCAGAAAAGAGGAATGACAAGAGGCTCTCCTGGGGTGG
GGTGGAGTCCTGTTGGATTTTGACAGCAGATGTGCTGTCCAGGGAAAAGAAATTTGGATAGCCA
GGAACTGAAAACCCCACCAATCTAAAATAAGACCTCCATGGCTCTTCCCCAGGGATAAACACAT
ACTGCCAGATCTCTCCTGGACAAAACCTCTGCTCCCTTTCCCATCTCTTCCCCAGCCAGGTCCC
AAGATTCCAGCTCCCCGGGAAAAAAAGGATCCCCCTATGTAGATCTTCCCTGCGGTGTGTGTGG
GTGGAGGAGCTGGGCCTCATTAGTGGACCATGGTCCAGGGCAGGGGATCCAGGCCCAGCACGGG
TAGGAGGAGAAGGCGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGCTCTCTGCTCTCTGAT
TGGGCAGACGTGGCCGGGTCAGACGTGTGACCCCACTGCTGTGGAAGGGCTGTGCCCCAACGCC
ACATGTCTTCCTATTCATCTGCTCTCCAGAGAGCTGTCCACTGTGCACCTGGGCCCTTAAGCCC
TTCTCTACCTGGACAGATTCCAGACCTCTTCCTCGGCCCACCTGTGCCCCACCCCACTCTGCCC
AGAAGTGCAAGAGCCCAAGCCGCCTCCATGGCCCCAGGAAGGACTCGGGGGAGGGGTCCCATAA
AGGGAGCCGCTCCAGCCAGACACCCCAGCCAGAATGGAGCTGACTGGTGGTCCTTCTTCTCCTC
ACTGCAAGACTAACTCTGTCCGGCTCAGCTCCACCTGCCTGTGACCCCCGGCTCCTAAATAAAC
TGCTTCGTGACTCTCACGTCCTTCATAGCAGACTGAGCCAGTGCCCAGAAGTTAACCCTTTATC
CACACCCATCCTGCTGCCTGCTGTGGATTTTAGCTTGGGAGAATGGAAAGCCCAGACGGAGCAG
ACCAAAGCACAGGACATTCTAGGAGCGGTGACCCTTCTACTGGAGGGAGTGATGGCAGCGCGGG
GACAGCTGGGACCCACGTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGACAGGTCCGCCTCCT
CCTTGGGGCCCTGCAGGGCCTCCTGGGGACCCAGCTTCCTCCACAGGGCAGGACCACAGCTCAC
AAGGACCCCAACGCCATCTTCCTGAGCTTCCAGCAGCTCCTCCGAGGAAAGGTGCGTTTCCTGC
TGCTTGTAGGAGGGCCCACCCTCTGCGCCAGGCGGGCCCTGCCCACCACCGCTGTCCCAAGCAG
TCCCTCTCTGTTGCTCACACTAAACAAGCTCCCAAACAGGACTTCTGCGTTGCTGGAGACGAAC
TCCAGCGTCTCAGCCAGAACTACTGGCTCTGGACTTCTGAACAGACGGCAGGGATTCGCAGCCA
AGATTCCTGGTCTGCTGAATCAGACTTCCAGGTCTTCAGACCGAAGCCCTGGACACCTGGACAG
GACACCAAGACCCTTGAACGGAACTCATGGACTCCTTCCTGGAGCTTCAGCCAGGGCCCTGGAA
GTTCCAGCCATTCCACCTGGAACTTTGGACACAGGCTTCCGGCCACCCCACCTCCAGCCCGGAT
ACTCTGCTTCCCCAGCCGCTCCTCCTGCTGGGCAGTGCACACTCTTCTCTCCTTCGCCCACCTT
GCCCACACCTGTGGTCCAGCTCCACCCCCTGCTTCCTGACCCTTCTGTGACAGCCAACTCCAGC
AGCCCTCCGCTACCCACATCCCACCCTCACTCCCAGAATGCATCTCAGGAAGGGTAAGGTGCCC
ACGCACAGCCACACGGGAGGGCTCTGCCCGGCACCTGCAGCTCTACCCGATGCCCTGCTTTTAC
CTGCAAGCCGAAGCGCTGGCAGAGGGGGAGGCCCAGGACAGAGATATTTTTTTTTAAGCTATTG
ACAATATGTATTCATCAGAGCAGCTAGTTATCTTTGGTGTTTTCTGTGTAATTTTGCAAATCAC
TAATTATCGATGTGCTCTTTTTCATGGTAACACTACAAAGGCTTGGCCTGGCCTGCCTGGTCCT
TGAATAGAGGTAGATTAACCTTGTGTCAGAAAA

hide sequence

RefSeq Acc Id:

XM_013513329 ⟹ XP_013368783

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	23,120,828 - 23,128,894 (+)	NCBI

Sequence:

show sequence

CGCACGGAGGGGAGGAGAGGCGGGCCTGAAGCCCCCCTCTGCCGACAGCCACGGGTGGATAGAC
CAGGAGATGTGTGTCCAGCCTAAAACGGGATCCTCAGGCCGGGGAGGGGCAGAAGTTGGGCCTG
AGGCCTGGACCGGTCACTTAGGCGAGGACCCGATCCCTGCCTGAAGGATGAAGACTTGTCTTTA
AGGCCGACAGCTGATCCTTCCCTGACAGCACCCTTCTTCCTTTGGCCCTGGCTCTCACGCGTTC
ACATCCCTCCTGAGGATGCCTGCGCCGTAGAGCTCCCGGGACAGGGACTTGTCAGAAACAGGCA
GCCTTTCCCCCTCGGTGAGGTGACTGGGGTTTTCTTCTCCAAAGTAACTTGTCCTCAAAGCTAT
TCAACCATCACCCCTCACTGCCTCACCCTCTTCCTTCACCCCAGGACCGTCTTCCCCTCCAGCC
CACCCCCAACCTCCTTTGTCCTGGTTTCTGGTCATATTCCCTGTCCCCTCCCACCCCACTCCCC
CACCAGCCTCCCAGCTATCCCAGCACCCTCCTTCCTAATCTCAGGAGGCATCTCGTCTGGCTGA
ACTGGAGAATTCCGGGATCTAGGCCATCCTCCATAGCAGACAGCCCCATCCCTGGGATGAGGAA
CAGGAGAGAGCTTGGGAGGAGGCGGGGTGGTGTCAGGAGCCCCGAAGACTGAGACTGTGGGGAG
CCTGGGACTAAGGGGAAGGCCAAGGAGCCAGAGGCAAAGGACGAAGGCGGCCAGCAGGAGGTAT
TAGCTGGGGGAGGCCAGCAGCGGTCTTTTCTGAGACAGGAACACATGGGCACAGAGGCAAGTGG
CCTTAGCTGTCCAAGCCCCTGGGCCCCAGCAGGTCACCTGGCCAGCACATAGCTTTCACCTTCC
AGTCCCCTCAAACTGACTGCGCCCTTGTCCTATAACGTGAGCCCTCACAAAGAGATCGCTCTGT
ACAATAGACAATACCCAGATTTCCACGCAGAAAAGAGGAATGACAAGAGGCTCTCCTGGGGTGG
GGTGGAGTCCTGTTGGATTTTGACAGCAGATGTGCTGTCCAGGGAAAAGAAATTTGGATAGCCA
GGAACTGAAAACCCCACCAATCTAAAATAAGACCTCCATGGCTCTTCCCCAGGGATAAACACAT
ACTGCCAGATCTCTCCTGGACAAAACCTCTGCTCCCTTTCCCATCTCTTCCCCAGCCAGGTCCC
AAGATTCCAGCTCCCCGGGAAAAAAAGGATCCCCCTATGTAGATCTTCCCTGCGGTGTGTGTGG
GTGGAGGAGCTGGGCCTCATTAGTGGACCATGGTCCAGGGCAGGGGATCCAGGCCCAGCACGGG
TAGGAGGAGAAGGCGTCACTTCCGGGGGCCTTCACCAGTGTCTGGTGGCTCTCTGCTCTCTGAT
TGGGCAGACGTGGCCGGGTCAGACGTGTGACCCCACTGCTGTGGAAGGGCTGTGCCCCAACGCC
ACATGTCTTCCTATTCATCTGCTCTCCAGAGAGCTGTCCACTGTGCACCTGGGCCCTTAAGCCC
TTCTCTACCTGGACAGATTCCAGACCTCTTCCTCGGCCCACCTGTGCCCCACCCCACTCTGCCC
AGAAGTGCAAGAGCCCAAGCCGCCTCCATGGCCCCAGGAAGGACTCGGGGGAGGGGTCCCATAA
AGGGAGCCGCTCCAGCCAGACACCCCAGCCAGAATGGAGCTGACTGGTGGTCCTTCTTCTCCTC
ACTGCAAGACTAACTCTGTCCGGCTCAGCTCCACCTGCCTGTGACCCCCGGCTCCTAAATAAAC
TGCTTCGTGACTCTCACGTCCTTCATAGCAGACTGAGCCAGTGCCCAGAAGTTAACCCTTTATC
CACACCCATCCTGCTGCCTGCTGTGGATTTTAGCTTGGGAGAATGGAAAGCCCAGACGGAGCAG
ACCAAAGCACAGGACATTCTAGGAGCGGTGACCCTTCTACTGGAGGGAGTGATGGCAGCGCGGG
GACAGCTGGGACCCACGTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGACAGGTCCGCCTCCT
CCTTGGGGCCCTGCAGGGCCTCCTGGGGACCCAGGGCAGGACCACAGCTCACAAGGACCCCAAC
GCCATCTTCCTGAGCTTCCAGCAGCTCCTCCGAGGAAAGGTGCGTTTCCTGCTGCTTGTAGGAG
GGCCCACCCTCTGCGCCAGGCGGGCCCTGCCCACCACCGCTGTCCCAAGCAGTCCCTCTCTGTT
GCTCACACTAAACAAGCTCCCAAACAGGACTTCTGCGTTGCTGGAGACGAACTCCAGCGTCTCA
GCCAGAACTACTGGCTCTGGACTTCTGAACAGACGGCAGGGATTCGCAGCCAAGATTCCTGGTC
TGCTGAATCAGACTTCCAGGTCTTCAGACCGAAGCCCTGGACACCTGGACAGGACACCAAGACC
CTTGAACGGAACTCATGGACTCCTTCCTGGAGCTTCAGCCAGGGCCCTGGAAGTTCCAGCCATT
CCACCTGGAACTTTGGACACAGGCTTCCGGCCACCCCACCTCCAGCCCGGATACTCTGCTTCCC
CAGCCGCTCCTCCTGCTGGGCAGTGCACACTCTTCTCTCCTTCGCCCACCTTGCCCACACCTGT
GGTCCAGCTCCACCCCCTGCTTCCTGACCCTTCTGTGACAGCCAACTCCAGCAGCCCTCCGCTA
CCCACATCCCACCCTCACTCCCAGAATGCATCTCAGGAAGGGTAAGGTGCCCACGCACAGCCAC
ACGGGAGGGCTCTGCCCGGCACCTGCAGCTCTACCCGATGCCCTGCTTTTACCTGCAAGCCGAA
GCGCTGGCAGAGGGGGAGGCCCAGGACAGAGATATTTTTTTTTAAGCTATTGACAATATGTATT
CATCAGAGCAGCTAGTTATCTTTGGTGTTTTCTGTGTAATTTTGCAAATCACTAATTATCGATG
TGCTCTTTTTCATGGTAACACTACAAAGGCTTGGCCTGGCCTGCCTGGTCCTTGAATAGAGGTA
GATTAACCTTGTGTCAGAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005383365	(Get FASTA)	NCBI Sequence Viewer
	XP_005383366	(Get FASTA)	NCBI Sequence Viewer
	XP_005383367	(Get FASTA)	NCBI Sequence Viewer
	XP_013368781	(Get FASTA)	NCBI Sequence Viewer
	XP_013368782	(Get FASTA)	NCBI Sequence Viewer
	XP_013368783	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000019729
	ENSCLAP00000019729.1

RefSeq Acc Id:	XP_005383365 ⟸ XM_005383308
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VX50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MELTDLLQVVLLLLTARLTLSGSAPPACDPRLLNKLLRDSHVLHSRLSQCPEVNPLSTPILLPA VDFSLGEWKAQTEQTKAQDILGAVTLLLEGVMAARGQLGPTCLSSLLGQLSGQVRLLLGALQGL LGTQLPPQGRTTAHKDPNAIFLSFQQLLRGKVRFLLLVGGPTLCARRALPTTAVPSSPSLLLTL NKLPNRTSALLETNSSVSARTTGSGLLNRRQGFAAKIPGLLNQTSRSSDRSPGHLDRTPRPLNG THGLLPGASARALEVPAIPPGTLDTGFRPPHLQPGYSASPAAPPAGQCTLFSPSPTLPTPVVQL HPLLPDPSVTANSSSPPLPTSHPHSQNASQEG hide sequence

RefSeq Acc Id:

XP_005383366 ⟸ XM_005383309

- Peptide Label:

isoform X2

- Sequence:

show sequence

MELTDLLQVVLLLLTARLTLSGSAPPACDPRLLNKLLRDSHVLHSRLSQCPEVNPLSTPILLPA
VDFSLGEWKAQTEQTKAQDILGAVTLLLEGVMAARGQLGPTCLSSLLGQLSGQVRLLLGALQGL
LGTQGRTTAHKDPNAIFLSFQQLLRGKVRFLLLVGGPTLCARRALPTTAVPSSPSLLLTLNKLP
NRTSALLETNSSVSARTTGSGLLNRRQGFAAKIPGLLNQTSRSSDRSPGHLDRTPRPLNGTHGL
LPGASARALEVPAIPPGTLDTGFRPPHLQPGYSASPAAPPAGQCTLFSPSPTLPTPVVQLHPLL
PDPSVTANSSSPPLPTSHPHSQNASQEG

hide sequence

RefSeq Acc Id:

XP_005383367 ⟸ XM_005383310

- Peptide Label:

isoform X6

- Sequence:

show sequence

MELTDLLQVVLLLLTARLTLSGSAPPACDPRLLNKLLRDSHVLHSRLSQCPEVNPLSTPILLPA
VDFSLGEWKAQTEQTKAQDILGAVTLLLEGVMAARGQLGPTCLSSLLGQLSGQVRLLLGALQGL
LGTQDHSSQGPQRHLPELPAAPPRKGAFPAACRRAHPLRQAGPAHHRCPKQSLSVAHTKQAPKQ
DFCVAGDELQRLSQNYWLWTSEQTAGIRSQDSWSAESDFQVFRPKPWTPGQDTKTLERNSWTPS
WSFSQGPGSSSHSTWNFGHRLPATPPPARILCFPSRSSCWAVHTLLSFAHLAHTCGPAPPPAS

hide sequence

RefSeq Acc Id:

XP_013368781 ⟸ XM_013513327

- Peptide Label:

isoform X3

- Sequence:

show sequence

MELTDLLQVVLLLLTARLTLSGSAPPACDPRLLNKLLRDSHVLHSRLSQCPEVNPLSTPILLPA
VDFSLGEWKAQTEQTKAQDILGAVTLLLEGVMAARGQLGPTCLSSLLGQLSGQVRLLLGALQGL
LGTQLPPQGRTTAHKDPNAIFLSFQQLLRGKDFCVAGDELQRLSQNYWLWTSEQTAGIRSQDSW
SAESDFQVFRPKPWTPGQDTKTLERNSWTPSWSFSQGPGSSSHSTWNFGHRLPATPPPARILCF
PSRSSCWAVHTLLSFAHLAHTCGPAPPPAS

hide sequence

RefSeq Acc Id:

XP_013368782 ⟸ XM_013513328

- Peptide Label:

isoform X4

- Sequence:

show sequence

MESPDGADQSTGHSRSGDPSTGGSDGSAGTAGTHVPLIPPGTAFWTGPPPPWGPAGPPGDPASS
TGQDHSSQGPQRHLPELPAAPPRKGAFPAACRRAHPLRQAGPAHHRCPKQSLSVAHTKQAPKQD
FCVAGDELQRLSQNYWLWTSEQTAGIRSQDSWSAESDFQVFRPKPWTPGQDTKTLERNSWTPSW
SFSQGPGSSSHSTWNFGHRLPATPPPARILCFPSRSSCWAVHTLLSFAHLAHTCGPAPPPAS

hide sequence

RefSeq Acc Id:

XP_013368783 ⟸ XM_013513329

- Peptide Label:

isoform X5

- Sequence:

show sequence

MESPDGADQSTGHSRSGDPSTGGSDGSAGTAGTHVPLIPPGTAFWTGPPPPWGPAGPPGDPGQD
HSSQGPQRHLPELPAAPPRKGAFPAACRRAHPLRQAGPAHHRCPKQSLSVAHTKQAPKQDFCVA
GDELQRLSQNYWLWTSEQTAGIRSQDSWSAESDFQVFRPKPWTPGQDTKTLERNSWTPSWSFSQ
GPGSSSHSTWNFGHRLPATPPPARILCFPSRSSCWAVHTLLSFAHLAHTCGPAPPPAS

hide sequence

RefSeq Acc Id:

ENSCLAP00000019729 ⟸ ENSCLAT00000019922

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000013534	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000019922	ENTREZGENE
	ENSCLAT00000019922.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.10	UniProtKB/TrEMBL
InterPro	4_helix_cytokine-like_core	UniProtKB/TrEMBL
	EPO_TPO	UniProtKB/TrEMBL
	Thrombopoietin	UniProtKB/TrEMBL
NCBI Gene	Thpo	ENTREZGENE
PANTHER	PTHR10560	UniProtKB/TrEMBL
	THROMBOPOIETIN	UniProtKB/TrEMBL
Pfam	EPO_TPO	UniProtKB/TrEMBL
PRINTS	THROMBOPTN	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47266	UniProtKB/TrEMBL
UniProt	A0A8C2VX50	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM