Dek (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955408 | 28,470,207 - 28,472,083 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DEK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 18,223,860 - 18,264,530 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 18,223,860 - 18,264,548 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 18,224,091 - 18,264,761 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 18,332,379 - 18,372,778 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 18,332,391 - 18,372,750 | NCBI | | | | | Celera | 6 | 19,462,368 - 19,502,747 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p22.3 | NCBI | | | | | HuRef | 6 | 18,168,737 - 18,209,264 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 18,226,996 - 18,267,392 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 18,096,002 - 18,136,672 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Dek (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 47,238,243 - 47,261,134 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 47,238,251 - 47,259,677 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 47,084,767 - 47,107,530 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 47,084,775 - 47,106,201 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 47,180,136 - 47,201,589 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 47,095,757 - 47,117,082 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 48,169,343 - 48,190,333 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | A5 | NCBI | | | | | cM Map | 13 | 24.5 | NCBI | | | | |
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Dek (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 17 | 17,786,989 - 17,809,096 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 17 | 17,580,804 - 17,602,825 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 17,580,843 - 17,602,808 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 17 | 17,467,321 - 17,488,966 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 19,071,178 - 19,092,823 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 17,394,438 - 17,416,083 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 17 | 17,965,872 - 17,987,836 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 17,965,881 - 17,987,834 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 19,948,512 - 19,970,498 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 17 | 23,633,551 - 23,655,507 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 17 | 23,633,599 - 23,655,553 (+) | NCBI | | | | | Celera | 17 | 17,292,456 - 17,314,107 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | p14 | NCBI | | | | |
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DEK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 32,883,587 - 32,923,584 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 28,868,850 - 28,909,152 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 18,071,928 - 18,112,245 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 18,425,882 - 18,465,828 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 18,427,844 - 18,465,606 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LOC100688177 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 10,279,204 - 10,280,935 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 11,622,628 - 11,624,150 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 10,169,743 - 10,171,465 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 3 | 10,110,427 - 10,111,962 (-) | NCBI | | UMICH_Zoey_3.1 | | |
|
Dek (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 7,737,766 - 7,766,430 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936552 | 3,966,198 - 3,993,113 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936552 | 3,964,515 - 3,997,318 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
DEK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 13,872,775 - 13,935,173 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 13,901,562 - 13,935,477 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 14,643,279 - 14,676,979 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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DEK (Chlorocebus sabaeus - green monkey) |
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Dek (Heterocephalus glaber - naked mole-rat) |
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