Casp6 (caspase 6) - Rat Genome Database

Name: Casp6
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Casp6 (caspase 6) Chinchilla lanigera

Analyze

Symbol:

Casp6

Name:

caspase 6

RGD ID:

8986610

Description:

ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type endopeptidase activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity involved in execution phase of apoptosis (ortholog); INVOLVED IN activation of innate immune response (ortholog); acute inflammatory response to non-antigenic stimulus (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

caspase 6, apoptosis-related cysteine peptidase; caspase-6

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CASP6 (caspase 6)	NCBI	Ortholog
Mus musculus (house mouse):	Casp6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Casp6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CASP6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CASP6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Casp6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CASP6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CASP6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Casp6 (caspase 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955496	577,832 - 584,287 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955496	575,839 - 584,287 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

brain ischemia (ISO)

Breast Neoplasms (ISO)

chronic myeloid leukemia (ISO)

ductal carcinoma in situ (ISO)

endometritis (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

lung non-small cell carcinoma (ISO)

middle cerebral artery infarction (ISO)

Osteoarthritis, Experimental (ISO)

ovarian carcinoma (ISO)

prostate carcinoma (ISO)

prostatic hypertrophy (ISO)

Reperfusion Injury (ISO)

Sepsis (ISO)

status epilepticus (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of innate immune response (ISO)

acute inflammatory response to non-antigenic stimulus (ISO)

axonal fasciculation (ISO)

cellular response to staurosporine (ISO)

epithelial cell differentiation (ISO)

hepatocyte apoptotic process (ISO)

intrinsic apoptotic signaling pathway by p53 class mediator (ISO)

lens development in camera-type eye (ISO)

positive regulation of apoptotic process (ISO)

positive regulation of necroptotic process (ISO)

positive regulation of neuron apoptotic process (ISO)

positive regulation of retinal cell programmed cell death (ISO)

protein autoprocessing (ISO)

proteolysis (ISO)

pyroptosis (ISO)

regulation of programmed cell death (ISO)

response to cytokine (ISO)

response to estradiol (ISO)

response to gamma radiation (ISO)

response to glucose (ISO)

response to hydrogen peroxide (ISO)

response to iron ion (ISO)

response to metal ion (ISO)

response to organonitrogen compound (ISO)

response to testosterone (ISO)

response to toxic substance (ISO)

Cellular Component

axon (ISO)

cytoplasm (ISO)

cytosol (ISO)

neuronal cell body (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

cysteine-type endopeptidase activity (ISO)

cysteine-type endopeptidase activity involved in apoptotic process (ISO)

cysteine-type endopeptidase activity involved in execution phase of apoptosis (ISO)

endopeptidase activity (ISO)

identical protein binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Casp6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955496	577,832 - 584,287 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955496	575,839 - 584,287 (+)	NCBI	ChiLan1.0	ChiLan1.0

CASP6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	109,664,388 - 109,709,767 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	109,688,622 - 109,703,583 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	110,609,784 - 110,624,601 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	110,829,234 - 110,844,078 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	110,967,388 - 110,982,233	NCBI
Celera	4	107,903,448 - 107,918,292 (-)	NCBI		Celera
Cytogenetic Map	4	q25	NCBI
HuRef	4	106,342,777 - 106,357,627 (-)	NCBI		HuRef
CHM1_1	4	110,586,394 - 110,601,238 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	112,966,324 - 113,010,471 (-)	NCBI		T2T-CHM13v2.0

Casp6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	129,695,064 - 129,707,761 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	129,695,074 - 129,707,752 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	129,901,415 - 129,914,112 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	129,901,425 - 129,914,103 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	129,604,343 - 129,617,020 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	129,893,486 - 129,905,973 (+)	NCBI		MGSCv36	mm8
Celera	3	136,415,853 - 136,428,433 (+)	NCBI		Celera
Cytogenetic Map	3	G3	NCBI
cM Map	3	59.5	NCBI

Casp6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	221,140,287 - 221,152,727 (+)	NCBI		GRCr8
mRatBN7.2	2	218,466,063 - 218,478,503 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	218,466,076 - 218,478,502 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	226,144,507 - 226,156,834 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	224,044,202 - 224,056,533 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	218,901,851 - 218,914,178 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	235,341,326 - 235,353,715 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	235,341,365 - 235,353,967 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	2	230,186,198 - 230,198,555 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	249,539,649 - 249,552,032 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	227,361,538 - 227,373,844 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	227,348,217 - 227,360,523 (+)	NCBI
Celera	2	210,748,422 - 210,760,763 (+)	NCBI		Celera
Cytogenetic Map	2	q43	NCBI

CASP6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	107,781,319 - 107,798,789 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	108,075,317 - 108,092,294 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	102,186,215 - 102,201,992 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	112,753,988 - 112,768,836 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	112,753,988 - 112,768,836 (-)	Ensembl	panpan1.1		panPan2

CASP6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	32	29,897,706 - 29,910,522 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	32	29,897,823 - 29,911,469 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	32	12,119,155 - 12,132,295 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	32	30,117,004 - 30,130,146 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	32	30,117,008 - 30,130,778 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	32	30,111,494 - 30,124,567 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	32	29,855,989 - 29,869,067 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	32	9,980,365 - 9,993,491 (+)	NCBI		UU_Cfam_GSD_1.0

Casp6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	11,030,886 - 11,038,493 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936563	911,304 - 919,119 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936563	912,502 - 920,025 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CASP6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	112,520,629 - 112,537,045 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	112,519,450 - 112,534,315 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	120,664,346 - 120,678,399 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CASP6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	57,592,632 - 57,616,094 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	57,593,342 - 57,607,489 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	36,243,873 - 36,268,826 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Casp6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624830	171,427 - 184,814 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624830	170,392 - 179,883 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005406189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013505399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01062235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01178103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000004713 ⟹ ENSCLAP00000004627

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955496	577,832 - 584,287 (+)	Ensembl

RefSeq Acc Id:

XM_005406189 ⟹ XP_005406246

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955496	575,839 - 584,287 (+)	NCBI

Sequence:

show sequence

TCAGGGGCGTGGCTTGGCCAGGGGCCCTAAATTTAGGAAGCGCACAGGCTGCCTAGCGCGGGTG
CGGAGCGGGGCTAGGAGGATCCCCGGAGCACTACAGGTGAGGAACAAAACATAGCAGAAACAGA
TACCTTCCTGACCAGACAGGAAAATGGTCGATCCGGTGGAAGAGTACAAAATGGACCACAAGAA
GAGAGGGGTCGCGCTGATCTTCAACCAGGAGCACTTCTTCTGGCACCTGATGCTGCCCGAAAGG
CGGGGCACCAACGTGGACAGGGACAACCTGGCTCGCAGGTTTTCAGAGCTAGGATTTGAAGTGA
AATGCTTTAATAATCTTAAAGTGGAAGAGCTGCTGCAGAAAATTCACGAGGTGTCAACCACAAG
CCACGTGGACGCTGACTGCTTTGTGTGTGCCTTCCTAACCCACGGCGAAGACGACCATATCTAT
GCGTATGACGCCAAGATTCAAATCCAAACCTTGACTGCCCAGTTCAGAGGGGACAAGTGCCAGA
GCCTGGTCGGGAAGCCCAAGATATTTATTATCCAGGCGTGTCGGGGACAGCAGCACGACGTGCC
TGTCCTCCCTCTGGATGTGGTGGACCATCGTCCCCCGGACACCCCGGAGAACATCACCGAGGTG
GACGCGGCCACGGTGCACACCCTCCCCGCGGGCGCAGACTTCCTCATGTGCTACTCAGTGGCAG
AAGGATATTATTCTCACCGAGAAACGGTGTATGGCTCGTGGTACATCCAGGATTTGTGTGAAAT
GTTGGGGCAATATGGATCCACGCTGGAGTTCACGGAGCTGCTCACGCTGGTGAACAGGAAGGTT
TCCCAGCGCTCTGTGGAGTTCTGCAAAGACCGCAGTGCCATCGGCAATAAGCAGGTGCCATGCT
TTGCCTCCATGCTGACCAAAAAGCTGCGCTTCTCGCCAAAGCCCAGAAAGTAGGGACGGCTCGG
CCTCTGCAGCCCACACCTGGCCCTTTTCATATCAGATGCACAGCTCCAGGTTCAGCTTCAGGTG
TGAGGTCCAGCTGTGGAAGTTTCTTCCCCAGTAGAGAAACACTTTTCTCATTTGTTTGTTTGTT
TTTATATTTTCATGTTAAAAAGGCTTGAAAAACACTCAGGAAATTACATAAAAATCTACAAGCA
TTGAGTGATTTTTTTTTATGTGCCCGAAATATCTAGCTGATTGAGCTTGTACTGTGCCTTTTTA
TAAAAGCTTCTTTTATAATGTTTTTAAAGACTTTTGGAATCCAAGAATGAGATCGTAAATTCCC
TTTAGTAAGCTATTTGAAGATCATGCCATATTAAACTTTTCTAGTTCATA

hide sequence

RefSeq Acc Id:

XM_013505399 ⟹ XP_013360853

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955496	575,843 - 584,287 (+)	NCBI

Sequence:

show sequence

GGGCGTGGCTTGGCCAGGGGCCCTAAATTTAGGAAGCGCACAGGCTGCCTAGCGCGGGTGCGGA
GCGGGGCTAGGAGGATCCCCGGAGCACTACAGACAGGAAAATGGTCGATCCGGTGGAAGAGTAC
AAAATGGACCACAAGAAGAGAGGGGTCGCGCTGATCTTCAACCAGGAGCACTTCTTCTGGCACC
TGATGCTGCCCGAAAGGCGGGGCACCAACGTGGACAGGGACAACCTGGCTCGCAGGTTTTCAGA
GCTAGGATTTGAAGTGAAATGCTTTAATAATCTTAAAGTGGAAGAGCTGCTGCAGAAAATTCAC
GAGGTGTCAACCACAAGCCACGTGGACGCTGACTGCTTTGTGTGTGCCTTCCTAACCCACGGCG
AAGACGACCATATCTATGCGTATGACGCCAAGATTCAAATCCAAACCTTGACTGCCCAGTTCAG
AGGGGACAAGTGCCAGAGCCTGGTCGGGAAGCCCAAGATATTTATTATCCAGGCGTGTCGGGGA
CAGCAGCACGACGTGCCTGTCCTCCCTCTGGATGTGGTGGACCATCGTCCCCCGGACACCCCGG
AGAACATCACCGAGGTGGACGCGGCCACGGTGCACACCCTCCCCGCGGGCGCAGACTTCCTCAT
GTGCTACTCAGTGGCAGAAGGATATTATTCTCACCGAGAAACGGTGTATGGCTCGTGGTACATC
CAGGATTTGTGTGAAATGTTGGGGCAATATGGATCCACGCTGGAGTTCACGGAGCTGCTCACGC
TGGTGAACAGGAAGGTTTCCCAGCGCTCTGTGGAGTTCTGCAAAGACCGCAGTGCCATCGGCAA
TAAGCAGGTGCCATGCTTTGCCTCCATGCTGACCAAAAAGCTGCGCTTCTCGCCAAAGCCCAGA
AAGTAGGGACGGCTCGGCCTCTGCAGCCCACACCTGGCCCTTTTCATATCAGATGCACAGCTCC
AGGTTCAGCTTCAGGTGTGAGGTCCAGCTGTGGAAGTTTCTTCCCCAGTAGAGAAACACTTTTC
TCATTTGTTTGTTTGTTTTTATATTTTCATGTTAAAAAGGCTTGAAAAACACTCAGGAAATTAC
ATAAAAATCTACAAGCATTGAGTGATTTTTTTTTATGTGCCCGAAATATCTAGCTGATTGAGCT
TGTACTGTGCCTTTTTATAAAAGCTTCTTTTATAATGTTTTTAAAGACTTTTGGAATCCAAGAA
TGAGATCGTAAATTCCCTTTAGTAAGCTATTTGAAGATCATGCCATATTAAACTTTTCTAGTTC
ATA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005406246	(Get FASTA)	NCBI Sequence Viewer
	XP_013360853	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004627
	ENSCLAP00000004627.1

RefSeq Acc Id:

XP_005406246 ⟸ XM_005406189

- UniProtKB:

A0A8C2UR54 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVDPVEEYKMDHKKRGVALIFNQEHFFWHLMLPERRGTNVDRDNLARRFSELGFEVKCFNNLKV
EELLQKIHEVSTTSHVDADCFVCAFLTHGEDDHIYAYDAKIQIQTLTAQFRGDKCQSLVGKPKI
FIIQACRGQQHDVPVLPLDVVDHRPPDTPENITEVDAATVHTLPAGADFLMCYSVAEGYYSHRE
TVYGSWYIQDLCEMLGQYGSTLEFTELLTLVNRKVSQRSVEFCKDRSAIGNKQVPCFASMLTKK
LRFSPKPRK

hide sequence

RefSeq Acc Id:

XP_013360853 ⟸ XM_013505399

- UniProtKB:

A0A8C2UR54 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVDPVEEYKMDHKKRGVALIFNQEHFFWHLMLPERRGTNVDRDNLARRFSELGFEVKCFNNLKV
EELLQKIHEVSTTSHVDADCFVCAFLTHGEDDHIYAYDAKIQIQTLTAQFRGDKCQSLVGKPKI
FIIQACRGQQHDVPVLPLDVVDHRPPDTPENITEVDAATVHTLPAGADFLMCYSVAEGYYSHRE
TVYGSWYIQDLCEMLGQYGSTLEFTELLTLVNRKVSQRSVEFCKDRSAIGNKQVPCFASMLTKK
LRFSPKPRK

hide sequence

RefSeq Acc Id:

ENSCLAP00000004627 ⟸ ENSCLAT00000004713

Protein Domains

Caspase family p10 Caspase family p20

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003293	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004713	ENTREZGENE
	ENSCLAT00000004713.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1460	UniProtKB/TrEMBL
InterPro	Caspase-like_dom_sf	UniProtKB/TrEMBL
	Caspase_cys_AS	UniProtKB/TrEMBL
	Caspase_his_AS	UniProtKB/TrEMBL
	Pept_C14_caspase	UniProtKB/TrEMBL
	Pept_C14_p10	UniProtKB/TrEMBL
	Pept_C14_p20	UniProtKB/TrEMBL
	Pept_C14A	UniProtKB/TrEMBL
NCBI Gene	Casp6	ENTREZGENE
PANTHER	PTHR10454	UniProtKB/TrEMBL
	PTHR10454:SF206	UniProtKB/TrEMBL
Pfam	Peptidase_C14	UniProtKB/TrEMBL
PRINTS	IL1BCENZYME	UniProtKB/TrEMBL
PROSITE	CASPASE_CYS	UniProtKB/TrEMBL
	CASPASE_HIS	UniProtKB/TrEMBL
	CASPASE_P10	UniProtKB/TrEMBL
	CASPASE_P20	UniProtKB/TrEMBL
SMART	CASc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52129	UniProtKB/TrEMBL
UniProt	A0A8C2UR54	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Casp6	caspase 6		caspase 6, apoptosis-related cysteine peptidase	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar