Rxfp1 (relaxin family peptide receptor 1) - Rat Genome Database

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Gene: Rxfp1 (relaxin family peptide receptor 1) Chinchilla lanigera
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Symbol: Rxfp1
Name: relaxin family peptide receptor 1
RGD ID: 8961829
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH endometriosis (ortholog); genetic disease (ortholog); megacolon (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: relaxin receptor 1; relaxin/insulin like family peptide receptor 1; relaxin/insulin-like family peptide receptor 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554718,858,581 - 8,963,278 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Rxfp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554718,858,581 - 8,963,278 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBIChiLan1.0ChiLan1.0
RXFP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384158,521,714 - 158,653,372 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4158,315,311 - 158,653,372 (+)EnsemblGRCh38hg38GRCh38
GRCh374159,442,866 - 159,574,524 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364159,662,497 - 159,792,713 (+)NCBINCBI36Build 36hg18NCBI36
Build 344159,800,733 - 159,930,812NCBI
Celera4156,783,607 - 156,914,284 (+)NCBICelera
Cytogenetic Map4q32.1NCBI
HuRef4155,192,674 - 155,324,336 (+)NCBIHuRef
CHM1_14159,419,318 - 159,550,966 (+)NCBICHM1_1
T2T-CHM13v2.04161,872,384 - 162,004,104 (+)NCBIT2T-CHM13v2.0
Rxfp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39379,548,910 - 79,645,258 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl379,548,918 - 79,645,187 (-)EnsemblGRCm39 Ensembl
GRCm38379,641,600 - 79,737,951 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl379,641,611 - 79,737,880 (-)EnsemblGRCm38mm10GRCm38
MGSCv37379,448,638 - 79,541,716 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36379,730,643 - 79,823,721 (-)NCBIMGSCv36mm8
Celera379,676,182 - 79,770,014 (-)NCBICelera
Cytogenetic Map3E3NCBI
cM Map334.94NCBI
Rxfp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82167,070,414 - 167,191,616 (-)NCBIGRCr8
mRatBN7.22164,772,270 - 164,893,484 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2164,774,799 - 164,893,412 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2171,994,219 - 172,111,251 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02170,010,244 - 170,127,276 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02164,619,088 - 164,736,127 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02178,402,411 - 178,520,213 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2178,399,274 - 178,521,038 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02197,737,525 - 197,930,441 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42171,044,633 - 171,163,195 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12170,994,738 - 171,113,301 (-)NCBI
Celera2158,873,015 - 158,989,696 (-)NCBICelera
Cytogenetic Map2q33NCBI
RXFP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23156,377,117 - 156,520,600 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14156,732,409 - 156,875,851 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04150,829,896 - 150,973,358 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14162,649,041 - 162,784,422 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4162,648,858 - 162,784,422 (+)Ensemblpanpan1.1panPan2
RXFP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11555,650,869 - 55,745,560 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1555,651,121 - 55,744,496 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1556,012,811 - 56,107,494 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01556,394,707 - 56,488,883 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1556,394,936 - 56,487,811 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11555,633,030 - 55,727,703 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01555,732,535 - 55,826,851 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01556,045,783 - 56,140,504 (+)NCBIUU_Cfam_GSD_1.0
Rxfp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530134,414,607 - 34,550,912 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365764,996,216 - 5,131,427 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365764,996,203 - 5,131,485 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RXFP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl847,473,788 - 47,601,357 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1847,473,465 - 47,603,332 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2849,871,933 - 50,006,029 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RXFP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17105,078,422 - 105,203,929 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7105,122,424 - 105,202,589 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603784,786,592 - 84,911,576 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rxfp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462484810,918 - 115,310 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462484810,648 - 115,474 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000008651   ⟹   ENSCLAP00000008524
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554718,858,581 - 8,963,278 (-)Ensembl
RefSeq Acc Id: XM_005400936   ⟹   XP_005400993
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005400937   ⟹   XP_005400994
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005400938   ⟹   XP_005400995
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554718,860,906 - 8,962,762 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522859   ⟹   XP_013378313
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522860   ⟹   XP_013378314
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522861   ⟹   XP_013378315
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554718,860,906 - 8,963,016 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005400994   ⟸   XM_005400937
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_005400993   ⟸   XM_005400936
- Peptide Label: isoform X1
- UniProtKB: A0A8C2V1R8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005400995   ⟸   XM_005400938
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_013378315   ⟸   XM_013522861
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013378313   ⟸   XM_013522859
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013378314   ⟸   XM_013522860
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCLAP00000008524   ⟸   ENSCLAT00000008651

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005962 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000008651 ENTREZGENE
  ENSCLAT00000008651.1 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
  4.10.400.10 UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  LDL_receptor-like_sf UniProtKB/TrEMBL
  LDLR_class-A_CS UniProtKB/TrEMBL
  LDrepeatLR_classA_rpt UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
  Relaxin_rcpt UniProtKB/TrEMBL
NCBI Gene Rxfp1 ENTREZGENE
PANTHER GLYCOPROTEIN HORMONE RECEPTOR UniProtKB/TrEMBL
  RELAXIN RECEPTOR 1 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
  Ldl_recept_a UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  RELAXINR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
  LDLRA_1 UniProtKB/TrEMBL
  LDLRA_2 UniProtKB/TrEMBL
  LRR UniProtKB/TrEMBL
SMART LDLa UniProtKB/TrEMBL
  LRR_SD22 UniProtKB/TrEMBL
  LRR_TYP UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
  L domain-like UniProtKB/TrEMBL
  SSF57424 UniProtKB/TrEMBL
UniProt A0A8C2V1R8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-02-27 Rxfp1  relaxin family peptide receptor 1    relaxin/insulin like family peptide receptor 1  Symbol and/or name change 5135510 APPROVED
2016-08-03 Rxfp1  relaxin/insulin like family peptide receptor 1    relaxin/insulin-like family peptide receptor 1  Symbol and/or name change 5135510 APPROVED