Kcnh7 (potassium voltage-gated channel subfamily H member 7) - Rat Genome Database

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Gene: Kcnh7 (potassium voltage-gated channel subfamily H member 7) Chinchilla lanigera
Analyze
Symbol: Kcnh7
Name: potassium voltage-gated channel subfamily H member 7
RGD ID: 8960685
Description: ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN circadian rhythm (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: potassium channel, voltage gated eag related subfamily H, member 7; potassium voltage-gated channel, subfamily H (eag-related), member 7
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544911,052,777 - 11,491,379 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544911,052,767 - 11,495,193 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kcnh7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544911,052,777 - 11,491,379 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544911,052,767 - 11,495,193 (+)NCBIChiLan1.0ChiLan1.0
KCNH7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382162,371,407 - 162,838,767 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2162,371,407 - 162,838,767 (-)EnsemblGRCh38hg38GRCh38
GRCh372163,227,917 - 163,695,277 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362162,936,163 - 163,403,486 (-)NCBINCBI36Build 36hg18NCBI36
Build 342163,105,265 - 163,520,747NCBI
Celera2156,838,249 - 157,305,494 (-)NCBICelera
Cytogenetic Map2q24.2NCBI
HuRef2155,110,219 - 155,577,951 (-)NCBIHuRef
CHM1_12163,233,802 - 163,700,825 (-)NCBICHM1_1
T2T-CHM13v2.02162,828,067 - 163,295,631 (-)NCBIT2T-CHM13v2.0
Kcnh7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39262,524,428 - 63,014,980 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl262,523,758 - 63,014,631 (-)EnsemblGRCm39 Ensembl
GRCm38262,693,410 - 63,184,287 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl262,693,414 - 63,184,287 (-)EnsemblGRCm38mm10GRCm38
MGSCv37262,541,003 - 63,022,344 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36262,503,787 - 62,990,422 (-)NCBIMGSCv36mm8
Celera264,395,436 - 64,884,597 (-)NCBICelera
Cytogenetic Map2C1.3NCBI
cM Map236.5NCBI
Kcnh7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8367,737,900 - 68,230,950 (-)NCBIGRCr8
mRatBN7.2347,329,338 - 47,822,122 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl347,338,501 - 47,822,195 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx350,693,240 - 51,172,491 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0359,276,771 - 59,756,022 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0357,049,903 - 57,529,711 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0348,662,450 - 49,168,716 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl348,671,079 - 48,831,467 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0355,325,680 - 55,822,973 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4344,657,361 - 45,153,509 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1344,553,732 - 45,049,881 (-)NCBI
Celera346,979,379 - 47,455,872 (-)NCBICelera
Cytogenetic Map3q21NCBI
KCNH7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21365,057,056 - 65,538,641 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B65,072,031 - 65,553,616 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B49,657,021 - 50,140,216 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B167,033,119 - 167,507,053 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B167,033,119 - 167,506,691 (-)Ensemblpanpan1.1panPan2
KCNH7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1367,781,323 - 8,260,893 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl367,649,727 - 8,261,048 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha367,924,497 - 8,405,370 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0367,912,971 - 8,393,200 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl367,921,442 - 8,393,196 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1367,931,129 - 8,410,170 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0367,972,137 - 8,444,518 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0368,079,838 - 8,559,344 (-)NCBIUU_Cfam_GSD_1.0
Kcnh7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303124,933,273 - 125,395,993 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646916,222,005 - 16,691,596 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646916,221,750 - 16,674,526 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNH7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1569,059,870 - 69,555,049 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11569,053,456 - 69,555,144 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21576,700,311 - 77,198,048 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNH7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11047,786,795 - 48,248,348 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1047,785,318 - 47,950,144 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040151,280,149 - 151,747,051 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnh7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247322,684,948 - 3,148,951 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247322,684,719 - 3,150,749 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000008542   ⟹   ENSCLAP00000008415
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544911,052,777 - 11,491,379 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000008543   ⟹   ENSCLAP00000008416
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544911,052,777 - 11,429,896 (+)Ensembl
RefSeq Acc Id: XM_013518746   ⟹   XP_013374200
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544911,052,767 - 11,495,193 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013374200 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000008415
  ENSCLAP00000008415.1
  ENSCLAP00000008416.1
Reference Protein Sequences
RefSeq Acc Id: XP_013374200   ⟸   XM_013518746
- UniProtKB: A0A8C2V6T4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000008415   ⟸   ENSCLAT00000008542
RefSeq Acc Id: ENSCLAP00000008416   ⟸   ENSCLAT00000008543
Protein Domains
Cyclic nucleotide-binding   Ion transport   PAS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005890 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000008542 ENTREZGENE
  ENSCLAT00000008542.1 UniProtKB/TrEMBL
  ENSCLAT00000008543.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1200.260 UniProtKB/TrEMBL
  1.10.287.70 UniProtKB/TrEMBL
  2.60.120.10 UniProtKB/TrEMBL
  PAS domain UniProtKB/TrEMBL
InterPro cNMP-bd-like UniProtKB/TrEMBL
  cNMP-bd_dom UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/TrEMBL
  K_chnl_volt-dep_EAG/ELK/ERG UniProtKB/TrEMBL
  K_chnl_volt-dep_ERG UniProtKB/TrEMBL
  PAS UniProtKB/TrEMBL
  PAS-like_dom_sf UniProtKB/TrEMBL
  RmlC-like_jellyroll UniProtKB/TrEMBL
NCBI Gene Kcnh7 ENTREZGENE
PANTHER POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY H MEMBER 7 UniProtKB/TrEMBL
  VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL UniProtKB/TrEMBL
Pfam cNMP_binding UniProtKB/TrEMBL
  Ion_trans UniProtKB/TrEMBL
  PAS_9 UniProtKB/TrEMBL
PRINTS EAGCHANLFMLY UniProtKB/TrEMBL
  ERGCHANNEL UniProtKB/TrEMBL
PROSITE CNMP_BINDING_3 UniProtKB/TrEMBL
SMART cNMP UniProtKB/TrEMBL
Superfamily-SCOP SSF51206 UniProtKB/TrEMBL
  SSF55785 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A8C2V1G4_CHILA UniProtKB/TrEMBL
  A0A8C2V6T4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Kcnh7  potassium voltage-gated channel subfamily H member 7    potassium channel, voltage gated eag related subfamily H, member 7  Symbol and/or name change 5135510 APPROVED
2015-08-25 Kcnh7  potassium channel, voltage gated eag related subfamily H, member 7    potassium voltage-gated channel, subfamily H (eag-related), member 7  Symbol and/or name change 5135510 APPROVED