Tacr3 (tachykinin receptor 3) - Rat Genome Database

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Gene: Tacr3 (tachykinin receptor 3) Chinchilla lanigera
Analyze
Symbol: Tacr3
Name: tachykinin receptor 3
RGD ID: 8924544
Description: ENCODES a protein that exhibits tachykinin receptor activity (ortholog); INVOLVED IN positive regulation of blood pressure (ortholog); positive regulation of flagellated sperm motility (ortholog); positive regulation of heart rate (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); amenorrhea (ortholog); autism spectrum disorder (ortholog); FOUND IN dendrite membrane (ortholog); neuronal cell body membrane (ortholog); sperm midpiece (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuromedin-K receptor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554965,151,668 - 5,222,624 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554965,152,134 - 5,222,565 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Tacr3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554965,151,668 - 5,222,624 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554965,152,134 - 5,222,565 (+)NCBIChiLan1.0ChiLan1.0
TACR3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384103,586,031 - 103,719,985 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4103,586,031 - 103,719,985 (-)EnsemblGRCh38hg38GRCh38
GRCh374104,507,188 - 104,641,142 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364104,730,074 - 104,860,422 (-)NCBINCBI36Build 36hg18NCBI36
Build 344104,868,228 - 104,998,577NCBI
Celera4101,809,125 - 101,939,478 (-)NCBICelera
Cytogenetic Map4q24NCBI
HuRef4100,245,509 - 100,375,866 (-)NCBIHuRef
CHM1_14104,487,252 - 104,617,580 (-)NCBICHM1_1
T2T-CHM13v2.04106,897,954 - 107,031,922 (-)NCBIT2T-CHM13v2.0
Tacr3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393134,534,768 - 134,640,342 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3134,534,768 - 134,640,340 (+)EnsemblGRCm39 Ensembl
GRCm383134,829,007 - 134,934,581 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3134,829,007 - 134,934,579 (+)EnsemblGRCm38mm10GRCm38
MGSCv373134,491,971 - 134,597,545 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363134,766,394 - 134,871,959 (+)NCBIMGSCv36mm8
Celera3141,238,671 - 141,345,575 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map362.47NCBI
Tacr3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82225,940,497 - 226,037,756 (+)NCBIGRCr8
mRatBN7.22223,266,536 - 223,363,791 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2223,266,536 - 223,363,791 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2230,969,011 - 231,055,530 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02228,868,726 - 228,955,238 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02223,733,543 - 223,820,045 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02240,021,152 - 240,118,971 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2240,021,152 - 240,118,971 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02258,547,661 - 258,644,112 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42232,309,015 - 232,404,964 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12232,295,754 - 232,391,704 (+)NCBI
Celera2215,485,216 - 215,569,645 (+)NCBICelera
Cytogenetic Map2q43NCBI
TACR3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23101,649,480 - 101,782,419 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14101,936,181 - 102,074,800 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0496,022,788 - 96,162,249 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14106,644,943 - 106,776,172 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4106,644,943 - 106,776,172 (-)Ensemblpanpan1.1panPan2
TACR3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13224,812,344 - 24,888,452 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3224,812,119 - 24,907,580 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3217,136,602 - 17,213,041 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03225,029,113 - 25,105,792 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3225,028,888 - 25,106,462 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13225,048,235 - 25,126,781 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03224,791,973 - 24,868,622 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03214,994,194 - 15,070,872 (+)NCBIUU_Cfam_GSD_1.0
TACR3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8117,662,122 - 117,721,613 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18117,662,122 - 117,718,317 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28126,511,759 - 126,570,636 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TACR3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1751,662,248 - 51,764,058 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl751,665,147 - 51,762,390 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603730,211,968 - 30,313,605 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tacr3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248304,635,987 - 4,704,251 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000008227   ⟹   ENSCLAP00000008102
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554965,151,668 - 5,222,624 (+)Ensembl
RefSeq Acc Id: XM_005406230   ⟹   XP_005406287
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554965,152,134 - 5,222,565 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005406287 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000008102
  ENSCLAP00000008102.1
RefSeq Acc Id: XP_005406287   ⟸   XM_005406230
- UniProtKB: A0A8C2V0G3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000008102   ⟸   ENSCLAT00000008227

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005677 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000008227 ENTREZGENE
  ENSCLAT00000008227.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Neurokn_rcpt UniProtKB/TrEMBL
  NK3_rcpt UniProtKB/TrEMBL
NCBI Gene Tacr3 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED UniProtKB/TrEMBL
  NEUROMEDIN-K RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  NEUROKININ3R UniProtKB/TrEMBL
  NEUROKININR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C2V0G3 ENTREZGENE, UniProtKB/TrEMBL