Tph2 (tryptophan hydroxylase 2) - Rat Genome Database

Name: Tph2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Tph2 (tryptophan hydroxylase 2) Chinchilla lanigera

Analyze

Symbol:

Tph2

Name:

tryptophan hydroxylase 2

RGD ID:

8923251

Description:

ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); circadian rhythm (ortholog); response to activity (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Attention Deficit-Hyperactivity Disorder 7 (ortholog); autistic disorder (ortholog); FOUND IN neuron projection (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tryptophan 5-hydroxylase 2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TPH2 (tryptophan hydroxylase 2)	NCBI	Ortholog
Mus musculus (house mouse):	Tph2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tph2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TPH2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TPH2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tph2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TPH2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TPH2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tph2 (tryptophan hydroxylase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	11,886,206 - 11,982,550 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	11,877,474 - 11,981,035 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

attention deficit hyperactivity disorder (ISO)

Attention Deficit-Hyperactivity Disorder 7 (ISO)

autistic disorder (ISO)

bipolar disorder (ISO)

depressive disorder (ISO)

Fever (ISO)

genetic disease (ISO)

major depressive disorder (ISO)

melancholic depression (ISO)

panic disorder (ISO)

pulmonary hypertension (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to lithium ion (ISO)

circadian rhythm (ISO)

response to activity (ISO)

response to calcium ion (ISO)

response to estrogen (ISO)

response to glucocorticoid (ISO)

response to nutrient levels (ISO)

Cellular Component

neuron projection (ISO)

Molecular Function

tryptophan 5-monooxygenase activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Tph2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	11,886,206 - 11,982,550 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	11,877,474 - 11,981,035 (+)	NCBI	ChiLan1.0	ChiLan1.0

TPH2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	71,938,845 - 72,032,440 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	71,938,845 - 72,186,618 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	72,332,625 - 72,426,220 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	70,618,893 - 70,712,488 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	70,618,892 - 70,712,488	NCBI
Celera	12	71,995,911 - 72,089,543 (+)	NCBI		Celera
Cytogenetic Map	12	q21.1	NCBI
HuRef	12	69,382,235 - 69,474,238 (+)	NCBI		HuRef
CHM1_1	12	72,299,779 - 72,391,813 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	71,916,323 - 72,008,338 (+)	NCBI		T2T-CHM13v2.0

Tph2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	114,914,546 - 115,020,927 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	114,914,546 - 115,020,927 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	115,078,641 - 115,185,022 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	115,078,641 - 115,185,022 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	114,515,697 - 114,622,078 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	114,482,751 - 114,589,132 (-)	NCBI		MGSCv36	mm8
Celera	10	117,006,698 - 117,113,837 (-)	NCBI		Celera
Cytogenetic Map	10	D2	NCBI
cM Map	10	63.51	NCBI

Tph2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	52,571,909 - 52,676,305 (-)	NCBI		GRCr8
mRatBN7.2	7	50,685,694 - 50,789,424 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	50,685,694 - 50,789,424 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	52,592,588 - 52,696,312 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	54,795,694 - 54,899,410 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	54,573,629 - 54,677,371 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	58,042,279 - 58,149,220 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	58,042,281 - 58,149,061 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	58,053,268 - 58,157,949 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	54,321,033 - 54,430,706 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	54,341,665 - 54,451,339 (-)	NCBI
Celera	7	47,478,282 - 47,582,240 (-)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

TPH2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	79,966,411 - 80,062,791 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	79,962,807 - 80,059,170 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	69,460,883 - 69,557,329 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	72,318,908 - 72,412,557 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	72,318,908 - 72,412,557 (+)	Ensembl	panpan1.1		panPan2

TPH2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	13,442,611 - 13,526,537 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	13,442,611 - 13,527,243 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	13,381,425 - 13,464,836 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	13,578,664 - 13,662,404 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	13,578,143 - 13,663,110 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	13,440,095 - 13,523,686 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	13,688,920 - 13,772,483 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	13,812,858 - 13,896,308 (+)	NCBI		UU_Cfam_GSD_1.0

Tph2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	44,662,510 - 44,753,680 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936568	974,767 - 1,065,804 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936568	974,575 - 1,065,800 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TPH2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	35,918,370 - 36,017,509 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	35,917,159 - 36,016,981 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	38,620,459 - 38,716,640 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TPH2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	67,568,744 - 67,664,911 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	177,991,214 - 178,084,445 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tph2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	25,702,630 - 25,801,618 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624750	25,702,597 - 25,801,938 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005374324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013517642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013517643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013517645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01004844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01275596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000007386 ⟹ ENSCLAP00000007272

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955405	11,886,206 - 11,982,550 (+)	Ensembl

RefSeq Acc Id:

XM_005374324 ⟹ XP_005374381

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955405	11,877,474 - 11,981,035 (+)	NCBI

Sequence:

show sequence

TCAAGGCCAGCCTTCACTGCATAGTGAGACCCTGTCTCAAAAAAAGACAAAAAAAGAACATTAA
ATATCTATCACTAAAGATAGTTTAGATAAAGTAAACCAAAATTTTAATTGAAGAATCTAGAACT
TGACTTGTGTACAACTGTGTGCCAGGGAAATGCCATTCTGGCATCTTGGGTATCTTTACTTTGG
GTTGTCAGAGGATGCACAAATCTCTTAGTGTGTGCAAAGTCTTGTGTGCACATGTGCATGTTTT
GTTTTTCTGGTAGTGGGGATTGAACTCAGGGCGTTCATACTGAACTACATCCCCATCCATTTTT
AATTTTGAGACGAGGTCTTCCTGATTTGTCCAGGTAGGACTCGAACTCTGAGTTCTTCTGTCTC
AGCCTCCCAGAGTGCTGGCATTATAAGCTTGTGCCACCGTGCCTGACTTGTGCATAGTTTTGAA
GAGAAGTGACATGCCTTCTCAAAGTATTTTATGATATTTTTCAAAATTTGAGAATCATTGTTAT
AAATGATTTAACATGAGAATAATGACATAATTTATAACTCATGCCAGTGATTTTATGTGCTTAA
CCACTCTTAAAATATCTTTAGGGTGCTCATTTCTAGATCCTTGGTCTGTATTATCTAAATACAT
TGAAGTTCTACTTTGGACATACCAAATCAGAGTCTTGGAAGTAAAATAAAGAACTCTGCTTTTT
ACCAGGTGGAGAACAATCGAGTGGCCATCAAGAGCACCAAAGCAGTGGCTAAGACCTGGCCGTT
TAGTTTCCTTTTATTCTCAGGAGGAGTGCAGGGTTAGTGTCTGAGCTCTATGTGTGGCTGAATC
AAAGCTTCCCGTTTCCTTTGCAACACAGTTGCCTGCACATCACTGTGCATACAGACATTGTATG
ATTAGAAAGTGCGTTTTGTGAAAGCCACATACACAATATGTTCACACACAGCTGTAACACACCA
GGTCGGGAAAGAGCTTATTACCATGAAATAGCTTAAGGATTCCGCAGTGCCTATCTTTTACATT
TTCCTACTTTTAGAAAAAGGCACAGAACGTTTGAATTCATAGGTACTTAACAACTAAGGCTAAC
TTGCTTATAATAGCAGGCTTGAGAGACGAGGGCTAACATCAGAGGACAGTTGTTTTCCTGTATA
AATAACATCCCTCTGTGCATTTTCCTCTACCACCTCCGTCCAAATGGCTACTCGCCCTGTGAAA
AAAACAAATCGTGTCTTGAGCACAGATAACCCCAGGCTTCAGATCTGTAATCTGACTGTGGCCA
TCAGCAACCAGAAATGAATTTCTTTCTAATCAGCTTTTCATCAGCCCCTAGTCACTCATATAAA
GGAGTCTGGGGAGGGGAAGATTTGCATTGCTCTTGAGCACCAGAGTTCTGGACAGCACCCCGAG
CACTGCGGAAGAGCACCCGGTCCTCTCTCCTCTGCCGGCGCTGCTACTGCCGCTCTAGTACCCC
CTGCTGCCGAGAAAGAAAATTACATCCGGATCCATGCAACCGGCAATGATGATGTTTTCCAGTA
AATACTGGGCAAGGAGAGGACTTTCCCTGGATTCAGCGGTGCCTGAAGAGCATCAGCTACTTGG
CAGCTTAACACTAAATAAAGCTAGCTCAAGCAAAAGTGAGGACAAGAAAGGCAACAAGGGAAGC
AGCAAAAGTGAAACCTCTACCGAGAGTGGCAAGACAGCAGTCATATTTTCCTTGAAAAACGAAG
TTGGGGGATTGGTAAAAGCACTGAGGATCTTTCAGGAAAAACATGTCAACATGGTTCATATTGA
ATCCAGGAGATCCCGGCGAAGGAGTTCTGAGGTTGAAATCTTCGTGGACTGTGAGTGTGGTAAA
ACAGAATTTCATGAGCTCATTCAACTACTGAAATTTCAAACCACCATTGTAACGCTGAATCCAC
CGGAGAGCATTTGGACAGAGGAAGAAGAGCTAGAGGATGTGCCTTGGTTCCCCCGGAAGATCTC
TGAGTTGGACAAATGCTCTCACAGGGTTCTCATGTATGGCACTGAGCTTGATGCTGACCACCCA
GGATTTAAGGACAATGTCTATCGACAGAGGAGGAAGTATTTTGTGGATGTGGCCATGAGTTATA
AATATGGCCAGCCCATTCCCAGGGTGGAATACACAGAAGAAGAAACGAAAACTTGGAGCGTCGT
ATTCCGGGAGCTCTCCAAACTCTACCCCACGCATGCTTGCCGCGAGTACTTGAAAAACTTCCCG
CTGCTGACTAAATACTGCGGCTACAGGGAGGACAACGTGCCTCAGCTGGAAGATGTGTCTGCGT
TTCTGAAAGAGCGCTCTGGCTTCACGGTGAGGCCCGTGGCTGGCTACCTGAGCCCAAGGGACTT
TCTGGCAGGACTGGCCTACAGAGTGTTCCACTGCACTCAGTACGTCCGGCATGGCTCGGACCCC
CTCTACACCCCAGAACCAGACACATGCCATGAGCTCCTGGGGCACGTTCCACTCCTTGCAGATC
CCAAGTTTGCTCAGTTTTCACAAGAGATAGGTCTGGCATCTCTGGGAGCCTCAGATGAAGATGT
TCAGAAACTTGCCACGTGCTATTTCTTCACAATCGAGTTTGGCCTTTGTAAGCAAGAAGGGCAA
CTGCGGGCCTATGGAGCAGGACTGCTTTCTTCCATCGGAGAATTAAAGCATGCTCTTTCTGACA
AAGCATGTGTGAAAGCCTTTGACCCGAAGACAACCTGCTTACAGGAATGCCTTATCACCACCTT
CCAGGAAGCCTACTTTGTTTCAGAAAGTTTTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCA
AAGTCAATTACCCGTCCCTTCTCAGTGTACTTCAATCCCTACACGCAGAGCATTGAAGTTCTGA
AAGACACCAGAAGTATTGAAAATGTGGTTCAGGACCTCCGCAGTGATCTGAACACAGTGTGTGA
TGCCTTAAATAAAATGAACCAATATCTGGGGATTTGATGCCTCAGACCAGTGCCGTTGCCAGCG
CAATCTTTTGGGGGTGTAGCAGCAATTTGGTCAATGTCATGTAACACCAGTAACTTTCTATGTC
ATGGCTTGGCTAGTAAGCATGCAACTCTGTATATCTATACCTACTTGTGACTTACTGTGTTAAT
ATATGCAGTGCCCTAAGGAAACCAATGGCAGATAACCAGTCATTGTTTGAGAAATTATACTATG
TTTAAATGTTTAAGTGTATTTGACATTCCTGCATAGTGTCCTTAACTGAACTGTTTCCTTAAAA
TTTGTAACAAGTAGCACTCTTATGATTCAAGCCTATGCCCTTTTCTTCTTTGGAGCTGAGATTT
TCCTCTGTGTCCATTAGATAAAATGAAAACAACAGTGGAACAGTTTCTGTTTTCAATAGTATCA
GTGTTTTCACCATATAGTGTGAGATAAACCCAGAGCTATAGGAAGCTTTCCACCATAATAACAA
ATGATTCAGTTTTCTAATTCAGAGGTGGTTGAGGTAACACAGTATTTGGGATGCTTTTAGGCTG
GGTAATTATACCGCATAAGAGAAGAGAACATTGTACAAACAGGATATAGAGGTTACTTGGCCCT
TGTGAAAAATGAGTTGTGAAAAGCTTCTTGAAGTACTTTGGAAAATAATACCTGTGGCAAGGAT
ATTAGGAAAGAGCAAACAGTGGGGAATAAGTCTTGTGACTATGCATTTAATGCTAGAATAAAGT
GAATTATAATCTCA

hide sequence

RefSeq Acc Id:

XM_013517642 ⟹ XP_013373096

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955405	11,880,554 - 11,981,035 (+)	NCBI

Sequence:

show sequence

CATTGGCAAGATAGAAAAGGAAATAATCTTTTCACTGGCATTGCATACCTGAGAAGAACTTCAC
AAATCATAACTTGTGGAGAAGGTGGAGAACAATCGAGTGGCCATCAAGAGCACCAAAGCAGTGG
CTAAGACCTGGCCGTTTAGTTTCCTTTTATTCTCAGGAGGAGTGCAGGGTTAGTGTCTGAGCTC
TATGTGTGGCTGAATCAAAGCTTCCCGTTTCCTTTGCAACACAGTTGCCTGCACATCACTGTGC
ATACAGACATTGTATGATTAGAAAGTGCGTTTTGTGAAAGCCACATACACAATATGTTCACACA
CAGCTGTAACACACCAGGTCGGGAAAGAGCTTATTACCATGAAATAGCTTAAGGATTCCGCAGT
GCCTATCTTTTACATTTTCCTACTTTTAGAAAAAGGCACAGAACGTTTGAATTCATAGGTACTT
AACAACTAAGGCTAACTTGCTTATAATAGCAGGCTTGAGAGACGAGGGCTAACATCAGAGGACA
GTTGTTTTCCTGTATAAATAACATCCCTCTGTGCATTTTCCTCTACCACCTCCGTCCAAATGGC
TACTCGCCCTGTGAAAAAAACAAATCGTGTCTTGAGCACAGATAACCCCAGGCTTCAGATCTGT
AATCTGACTGTGGCCATCAGCAACCAGAAATGAATTTCTTTCTAATCAGCTTTTCATCAGCCCC
TAGTCACTCATATAAAGGAGTCTGGGGAGGGGAAGATTTGCATTGCTCTTGAGCACCAGAGTTC
TGGACAGCACCCCGAGCACTGCGGAAGAGCACCCGGTCCTCTCTCCTCTGCCGGCGCTGCTACT
GCCGCTCTAGTACCCCCTGCTGCCGAGAAAGAAAATTACATCCGGATCCATGCAACCGGCAATG
ATGATGTTTTCCAGTAAATACTGGGCAAGGAGAGGACTTTCCCTGGATTCAGCGGTGCCTGAAG
AGCATCAGCTACTTGGCAGCTTAACACTAAATAAAGCTAGCTCAAGCAAAAGTGAGGACAAGAA
AGGCAACAAGGGAAGCAGCAAAAGTGAAACCTCTACCGAGAGTGGCAAGACAGCAGTCATATTT
TCCTTGAAAAACGAAGTTGGGGGATTGGTAAAAGCACTGAGGATCTTTCAGGAAAAACATGTCA
ACATGGTTCATATTGAATCCAGGAGATCCCGGCGAAGGAGTTCTGAGGTTGAAATCTTCGTGGA
CTGTGAGTGTGGTAAAACAGAATTTCATGAGCTCATTCAACTACTGAAATTTCAAACCACCATT
GTAACGCTGAATCCACCGGAGAGCATTTGGACAGAGGAAGAAGAGCTAGAGGATGTGCCTTGGT
TCCCCCGGAAGATCTCTGAGTTGGACAAATGCTCTCACAGGGTTCTCATGTATGGCACTGAGCT
TGATGCTGACCACCCAGGATTTAAGGACAATGTCTATCGACAGAGGAGGAAGTATTTTGTGGAT
GTGGCCATGAGTTATAAATATGGCCAGCCCATTCCCAGGGTGGAATACACAGAAGAAGAAACGA
AAACTTGGAGCGTCGTATTCCGGGAGCTCTCCAAACTCTACCCCACGCATGCTTGCCGCGAGTA
CTTGAAAAACTTCCCGCTGCTGACTAAATACTGCGGCTACAGGGAGGACAACGTGCCTCAGCTG
GAAGATGTGTCTGCGTTTCTGAAAGAGCGCTCTGGCTTCACGGTGAGGCCCGTGGCTGGCTACC
TGAGCCCAAGGGACTTTCTGGCAGGACTGGCCTACAGAGTGTTCCACTGCACTCAGTACGTCCG
GCATGGCTCGGACCCCCTCTACACCCCAGAACCAGACACATGCCATGAGCTCCTGGGGCACGTT
CCACTCCTTGCAGATCCCAAGTTTGCTCAGTTTTCACAAGAGATAGGTCTGGCATCTCTGGGAG
CCTCAGATGAAGATGTTCAGAAACTTGCCACGTGCTATTTCTTCACAATCGAGTTTGGCCTTTG
TAAGCAAGAAGGGCAACTGCGGGCCTATGGAGCAGGACTGCTTTCTTCCATCGGAGAATTAAAG
CATGCTCTTTCTGACAAAGCATGTGTGAAAGCCTTTGACCCGAAGACAACCTGCTTACAGGAAT
GCCTTATCACCACCTTCCAGGAAGCCTACTTTGTTTCAGAAAGTTTTGAAGAAGCCAAAGAAAA
GATGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTCTCAGTGTACTTCAATCCCTACACGCAG
AGCATTGAAGTTCTGAAAGACACCAGAAGTATTGAAAATGTGGTTCAGGACCTCCGCAGTGATC
TGAACACAGTGTGTGATGCCTTAAATAAAATGAACCAATATCTGGGGATTTGATGCCTCAGACC
AGTGCCGTTGCCAGCGCAATCTTTTGGGGGTGTAGCAGCAATTTGGTCAATGTCATGTAACACC
AGTAACTTTCTATGTCATGGCTTGGCTAGTAAGCATGCAACTCTGTATATCTATACCTACTTGT
GACTTACTGTGTTAATATATGCAGTGCCCTAAGGAAACCAATGGCAGATAACCAGTCATTGTTT
GAGAAATTATACTATGTTTAAATGTTTAAGTGTATTTGACATTCCTGCATAGTGTCCTTAACTG
AACTGTTTCCTTAAAATTTGTAACAAGTAGCACTCTTATGATTCAAGCCTATGCCCTTTTCTTC
TTTGGAGCTGAGATTTTCCTCTGTGTCCATTAGATAAAATGAAAACAACAGTGGAACAGTTTCT
GTTTTCAATAGTATCAGTGTTTTCACCATATAGTGTGAGATAAACCCAGAGCTATAGGAAGCTT
TCCACCATAATAACAAATGATTCAGTTTTCTAATTCAGAGGTGGTTGAGGTAACACAGTATTTG
GGATGCTTTTAGGCTGGGTAATTATACCGCATAAGAGAAGAGAACATTGTACAAACAGGATATA
GAGGTTACTTGGCCCTTGTGAAAAATGAGTTGTGAAAAGCTTCTTGAAGTACTTTGGAAAATAA
TACCTGTGGCAAGGATATTAGGAAAGAGCAAACAGTGGGGAATAAGTCTTGTGACTATGCATTT
AATGCTAGAATAAAGTGAATTATAATCTCA

hide sequence

RefSeq Acc Id:

XM_013517643 ⟹ XP_013373097

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955405	11,886,206 - 11,981,035 (+)	NCBI

Sequence:

show sequence

TTAATATGCTGTCATCTCCCAGCAAGACTATTTCAGATCTGAAGTTGTTTCTGCCTTCAGTCCT
GAATCTTCTTCCCAGGCGCTGCTCTCTGAAATATCAATATGTGTATGTAATTGCCTTGGGTAAA
GCTCTTCTTATTGTTGACATTTACTCACAGGAAGAGATGGAAAGTGCAGAGCCCTCACCATGTC
ACTGAAGGTTTATCACAGTCTGGGCCCTGCTTTCCCTTGAGCCTTATCTCACCAGCAGCCTCGC
CCCATACCTATACTCCATCGCTGTTGAGCAACACAGTTCTCTATATATTTCCTTAATGTTCCCT
CTGCCTGGAACCAGCTCTTTACTATTTCCGTTTCCTTATGGCTAACAAGTACAAGTTTGCCTTG
GAAGATTCAGCCCAACAACTCTTCCAGAAACCTCTCCTGATTCCCCTAAAGTGGTATTGAACAC
TCCATTCCTTGTTTTTCATACCTTCTATAGAGAAGTCAATTTTGTTTCACTTACTTATTTGTGT
GTTTTTTTCAGCTTAGAACGTTATTTCCTTAGGGGTGGGCACTATGTTCATTCACGTTTGCATT
GTTTACATGCTATTCCTTATCTGAAACACTTAAGAGGGGATACAGTGTAGAAGAACATGGGTTT
TGGAAACAGATATTCTGAATTTAAATTATGCCTAGGCCATTCTTTAATTGTGTGAAGCTTTGGT
AAGTGACCTAAACTCTCAATGCCCCAGTTTATTCATATGTAAAGCAGGAGTAACAGTGACTACC
TTGCAAGTGATGTGATGATTAATCATATTTTGACCCACATAAGTCTACAGAAAGTGCTTAGAAT
TGATATTAGCAAATACTAAGCATTTGGTAATACTAGCTATTATAATTTCTACGAATTTATGTAA
ACTTTCCTATAAGATGATCAGCACTGATCTGTAAGGAAAATACAAGCAAAATGATTATTTTCAG
AAATAGATCAAATGTAATTAAGTACCCCAAGTCCAGAAACAGTTTAAATCCAGTCAGTCAATAT
CAGTGCACCCACTCCTGTTTAAAATGTTTCATTTTTTAAAATCTTGTTTTCTAGAGAGGCAAAC
TGTGCCAGTTCCAGACTTTTAGTTTTTTAGTCAAGCACGGTTGGTTAAGCATTTTCCATTCTTC
AGCAAATTCGTAGTATTTTCCTGTGGGATAGTAAATTCTATGACTTTGTAAAGTTTAAGTAGAA
AGACTATCAGTTGATCTATGCAAGGCAATTGCTGGGTTTGATCTCGTTACAGGTGGAGAACAAT
CGAGTGGCCATCAAGAGCACCAAAGCAGTGGCTAAGACCTGGCCGTTTAGTTTCCTTTTATTCT
CAGGAGGAGTGCAGGCTTTTCATCAGCCCCTAGTCACTCATATAAAGGAGTCTGGGGAGGGGAA
GATTTGCATTGCTCTTGAGCACCAGAGTTCTGGACAGCACCCCGAGCACTGCGGAAGAGCACCC
GGTCCTCTCTCCTCTGCCGGCGCTGCTACTGCCGCTCTAGTACCCCCTGCTGCCGAGAAAGAAA
ATTACATCCGGATCCATGCAACCGGCAATGATGATGTTTTCCAGTAAATACTGGGCAAGGAGAG
GACTTTCCCTGGATTCAGCGGTGCCTGAAGAGCATCAGCTACTTGGCAGCTTAACACTAAATAA
AGCTAGCTCAAGCAAAAGTGAGGACAAGAAAGGCAACAAGGGAAGCAGCAAAAGTGAAACCTCT
ACCGAGAGTGGCAAGACAGCAGTCATATTTTCCTTGAAAAACGAAGTTGGGGGATTGGTAAAAG
CACTGAGGATCTTTCAGGAAAAACATGTCAACATGGTTCATATTGAATCCAGGAGATCCCGGCG
AAGGAGTTCTGAGGTTGAAATCTTCGTGGACTGTGAGTGTGGTAAAACAGAATTTCATGAGCTC
ATTCAACTACTGAAATTTCAAACCACCATTGTAACGCTGAATCCACCGGAGAGCATTTGGACAG
AGGAAGAAGAGCTAGAGGATGTGCCTTGGTTCCCCCGGAAGATCTCTGAGTTGGACAAATGCTC
TCACAGGGTTCTCATGTATGGCACTGAGCTTGATGCTGACCACCCAGGATTTAAGGACAATGTC
TATCGACAGAGGAGGAAGTATTTTGTGGATGTGGCCATGAGTTATAAATATGGCCAGCCCATTC
CCAGGGTGGAATACACAGAAGAAGAAACGAAAACTTGGAGCGTCGTATTCCGGGAGCTCTCCAA
ACTCTACCCCACGCATGCTTGCCGCGAGTACTTGAAAAACTTCCCGCTGCTGACTAAATACTGC
GGCTACAGGGAGGACAACGTGCCTCAGCTGGAAGATGTGTCTGCGTTTCTGAAAGAGCGCTCTG
GCTTCACGGTGAGGCCCGTGGCTGGCTACCTGAGCCCAAGGGACTTTCTGGCAGGACTGGCCTA
CAGAGTGTTCCACTGCACTCAGTACGTCCGGCATGGCTCGGACCCCCTCTACACCCCAGAACCA
GACACATGCCATGAGCTCCTGGGGCACGTTCCACTCCTTGCAGATCCCAAGTTTGCTCAGTTTT
CACAAGAGATAGGTCTGGCATCTCTGGGAGCCTCAGATGAAGATGTTCAGAAACTTGCCACGTG
CTATTTCTTCACAATCGAGTTTGGCCTTTGTAAGCAAGAAGGGCAACTGCGGGCCTATGGAGCA
GGACTGCTTTCTTCCATCGGAGAATTAAAGCATGCTCTTTCTGACAAAGCATGTGTGAAAGCCT
TTGACCCGAAGACAACCTGCTTACAGGAATGCCTTATCACCACCTTCCAGGAAGCCTACTTTGT
TTCAGAAAGTTTTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCAAAGTCAATTACCCGTCCC
TTCTCAGTGTACTTCAATCCCTACACGCAGAGCATTGAAGTTCTGAAAGACACCAGAAGTATTG
AAAATGTGGTTCAGGACCTCCGCAGTGATCTGAACACAGTGTGTGATGCCTTAAATAAAATGAA
CCAATATCTGGGGATTTGATGCCTCAGACCAGTGCCGTTGCCAGCGCAATCTTTTGGGGGTGTA
GCAGCAATTTGGTCAATGTCATGTAACACCAGTAACTTTCTATGTCATGGCTTGGCTAGTAAGC
ATGCAACTCTGTATATCTATACCTACTTGTGACTTACTGTGTTAATATATGCAGTGCCCTAAGG
AAACCAATGGCAGATAACCAGTCATTGTTTGAGAAATTATACTATGTTTAAATGTTTAAGTGTA
TTTGACATTCCTGCATAGTGTCCTTAACTGAACTGTTTCCTTAAAATTTGTAACAAGTAGCACT
CTTATGATTCAAGCCTATGCCCTTTTCTTCTTTGGAGCTGAGATTTTCCTCTGTGTCCATTAGA
TAAAATGAAAACAACAGTGGAACAGTTTCTGTTTTCAATAGTATCAGTGTTTTCACCATATAGT
GTGAGATAAACCCAGAGCTATAGGAAGCTTTCCACCATAATAACAAATGATTCAGTTTTCTAAT
TCAGAGGTGGTTGAGGTAACACAGTATTTGGGATGCTTTTAGGCTGGGTAATTATACCGCATAA
GAGAAGAGAACATTGTACAAACAGGATATAGAGGTTACTTGGCCCTTGTGAAAAATGAGTTGTG
AAAAGCTTCTTGAAGTACTTTGGAAAATAATACCTGTGGCAAGGATATTAGGAAAGAGCAAACA
GTGGGGAATAAGTCTTGTGACTATGCATTTAATGCTAGAATAAAGTGAATTATAATCTCA

hide sequence

RefSeq Acc Id:

XM_013517645 ⟹ XP_013373099

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955405	11,886,206 - 11,981,035 (+)	NCBI

Sequence:

show sequence

TTAATATGCTGTCATCTCCCAGCAAGACTATTTCAGATCTGAAGTTGTTTCTGCCTTCAGTCCT
GAATCTTCTTCCCAGGCGCTGCTCTCTGAAATATCAATATGTGTATGTAATTGCCTTGGGTAAA
GCTCTTCTTATTGTTGACATTTACTCACAGGAAGAGATGGAAAGTGCAGAGCCCTCACCATGTC
ACTGAAGGTTTATCACAGTCTGGGCCCTGCTTTCCCTTGAGCCTTATCTCACCAGCAGCCTCGC
CCCATACCTATACTCCATCGCTGTTGAGCAACACAGTTCTCTATATATTTCCTTAATGTTCCCT
CTGCCTGGAACCAGCTCTTTACTATTTCCGTTTCCTTATGGCTAACAAGTACAAGTTTGCCTTG
GAAGATTCAGCCCAACAACTCTTCCAGAAACCTCTCCTGATTCCCCTAAAGTGGTATTGAACAC
TCCATTCCTTGTTTTTCATACCTTCTATAGAGAAGTCAATTTTGTTTCACTTACTTATTTGTGT
GTTTTTTTCAGCTTAGAACGTTATTTCCTTAGGGGTGGGCACTATGTTCATTCACGTTTGCATT
GTTTACATGCTATTCCTTATCTGAAACACTTAAGAGGGGATACAGTGTAGAAGAACATGGGTTT
TGGAAACAGATATTCTGAATTTAAATTATGCCTAGGCCATTCTTTAATTGTGTGAAGCTTTGGT
AAGTGACCTAAACTCTCAATGCCCCAGTTTATTCATATGTAAAGCAGGAGTAACAGTGACTACC
TTGCAAGTGATGTGATGATTAATCATATTTTGACCCACATAAGTCTACAGAAAGTGCTTAGAAT
TGATATTAGCAAATACTAAGCATTTGGTAATACTAGCTATTATAATTTCTACGAATTTATGTAA
ACTTTCCTATAAGATGATCAGCACTGATCTGTAAGGAAAATACAAGCAAAATGATTATTTTCAG
AAATAGATCAAATGTAATTAAGTACCCCAAGTCCAGAAACAGTTTAAATCCAGTCAGTCAATAT
CAGTGCACCCACTCCTGTTTAAAATGTTTCATTTTTTAAAATCTTGTTTTCTAGAGAGGCAAAC
TGTGCCAGTTCCAGACTTTTAGTTTTTTAGTCAAGCACGGTTGGTTAAGCATTTTCCATTCTTC
AGCAAATTCGTAGTATTTTCCTGTGGGATAGTAAATTCTATGACTTTGTAAAGTTTAAGTAGAA
AGACTATCAGTTGATCTATGCAAGGCAATTGCTGGGTTTGATCTCGTTACAGGTGGAGAACAAT
CGAGTGGCCATCAAGAGCACCAAAGCAGTGGCTAAGACCTGGCCGTTTAGTTTCCTTTTATTCT
CAGGAGGAGTGCAGGCCCCTAGTCACTCATATAAAGGAGTCTGGGGAGGGGAAGATTTGCATTG
CTCTTGAGCACCAGAGTTCTGGACAGCACCCCGAGCACTGCGGAAGAGCACCCGGTCCTCTCTC
CTCTGCCGGCGCTGCTACTGCCGCTCTAGTACCCCCTGCTGCCGAGAAAGAAAATTACATCCGG
ATCCATGCAACCGGCAATGATGATGTTTTCCAGTAAATACTGGGCAAGGAGAGGACTTTCCCTG
GATTCAGCGGTGCCTGAAGAGCATCAGCTACTTGGCAGCTTAACACTAAATAAAGCTAGCTCAA
GCAAAAGTGAGGACAAGAAAGGCAACAAGGGAAGCAGCAAAAGTGAAACCTCTACCGAGAGTGG
CAAGACAGCAGTCATATTTTCCTTGAAAAACGAAGTTGGGGGATTGGTAAAAGCACTGAGGATC
TTTCAGGAAAAACATGTCAACATGGTTCATATTGAATCCAGGAGATCCCGGCGAAGGAGTTCTG
AGGTTGAAATCTTCGTGGACTGTGAGTGTGGTAAAACAGAATTTCATGAGCTCATTCAACTACT
GAAATTTCAAACCACCATTGTAACGCTGAATCCACCGGAGAGCATTTGGACAGAGGAAGAAGAG
CTAGAGGATGTGCCTTGGTTCCCCCGGAAGATCTCTGAGTTGGACAAATGCTCTCACAGGGTTC
TCATGTATGGCACTGAGCTTGATGCTGACCACCCAGGATTTAAGGACAATGTCTATCGACAGAG
GAGGAAGTATTTTGTGGATGTGGCCATGAGTTATAAATATGGCCAGCCCATTCCCAGGGTGGAA
TACACAGAAGAAGAAACGAAAACTTGGAGCGTCGTATTCCGGGAGCTCTCCAAACTCTACCCCA
CGCATGCTTGCCGCGAGTACTTGAAAAACTTCCCGCTGCTGACTAAATACTGCGGCTACAGGGA
GGACAACGTGCCTCAGCTGGAAGATGTGTCTGCGTTTCTGAAAGAGCGCTCTGGCTTCACGGTG
AGGCCCGTGGCTGGCTACCTGAGCCCAAGGGACTTTCTGGCAGGACTGGCCTACAGAGTGTTCC
ACTGCACTCAGTACGTCCGGCATGGCTCGGACCCCCTCTACACCCCAGAACCAGACACATGCCA
TGAGCTCCTGGGGCACGTTCCACTCCTTGCAGATCCCAAGTTTGCTCAGTTTTCACAAGAGATA
GGTCTGGCATCTCTGGGAGCCTCAGATGAAGATGTTCAGAAACTTGCCACGTGCTATTTCTTCA
CAATCGAGTTTGGCCTTTGTAAGCAAGAAGGGCAACTGCGGGCCTATGGAGCAGGACTGCTTTC
TTCCATCGGAGAATTAAAGCATGCTCTTTCTGACAAAGCATGTGTGAAAGCCTTTGACCCGAAG
ACAACCTGCTTACAGGAATGCCTTATCACCACCTTCCAGGAAGCCTACTTTGTTTCAGAAAGTT
TTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTCTCAGTGTA
CTTCAATCCCTACACGCAGAGCATTGAAGTTCTGAAAGACACCAGAAGTATTGAAAATGTGGTT
CAGGACCTCCGCAGTGATCTGAACACAGTGTGTGATGCCTTAAATAAAATGAACCAATATCTGG
GGATTTGATGCCTCAGACCAGTGCCGTTGCCAGCGCAATCTTTTGGGGGTGTAGCAGCAATTTG
GTCAATGTCATGTAACACCAGTAACTTTCTATGTCATGGCTTGGCTAGTAAGCATGCAACTCTG
TATATCTATACCTACTTGTGACTTACTGTGTTAATATATGCAGTGCCCTAAGGAAACCAATGGC
AGATAACCAGTCATTGTTTGAGAAATTATACTATGTTTAAATGTTTAAGTGTATTTGACATTCC
TGCATAGTGTCCTTAACTGAACTGTTTCCTTAAAATTTGTAACAAGTAGCACTCTTATGATTCA
AGCCTATGCCCTTTTCTTCTTTGGAGCTGAGATTTTCCTCTGTGTCCATTAGATAAAATGAAAA
CAACAGTGGAACAGTTTCTGTTTTCAATAGTATCAGTGTTTTCACCATATAGTGTGAGATAAAC
CCAGAGCTATAGGAAGCTTTCCACCATAATAACAAATGATTCAGTTTTCTAATTCAGAGGTGGT
TGAGGTAACACAGTATTTGGGATGCTTTTAGGCTGGGTAATTATACCGCATAAGAGAAGAGAAC
ATTGTACAAACAGGATATAGAGGTTACTTGGCCCTTGTGAAAAATGAGTTGTGAAAAGCTTCTT
GAAGTACTTTGGAAAATAATACCTGTGGCAAGGATATTAGGAAAGAGCAAACAGTGGGGAATAA
GTCTTGTGACTATGCATTTAATGCTAGAATAAAGTGAATTATAATCTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005374381	(Get FASTA)	NCBI Sequence Viewer
	XP_013373096	(Get FASTA)	NCBI Sequence Viewer
	XP_013373097	(Get FASTA)	NCBI Sequence Viewer
	XP_013373099	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007272
	ENSCLAP00000007272.1

RefSeq Acc Id:

XP_005374381 ⟸ XM_005374324

- UniProtKB:

A0A8C2YLF0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQPAMMMFSSKYWARRGLSLDSAVPEEHQLLGSLTLNKASSSKSEDKKGNKGSSKSETSTESGK
TAVIFSLKNEVGGLVKALRIFQEKHVNMVHIESRRSRRRSSEVEIFVDCECGKTEFHELIQLLK
FQTTIVTLNPPESIWTEEEELEDVPWFPRKISELDKCSHRVLMYGTELDADHPGFKDNVYRQRR
KYFVDVAMSYKYGQPIPRVEYTEEETKTWSVVFRELSKLYPTHACREYLKNFPLLTKYCGYRED
NVPQLEDVSAFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYVRHGSDPLYTPEPDTCHE
LLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSS
IGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFAKSITRPFSVYF
NPYTQSIEVLKDTRSIENVVQDLRSDLNTVCDALNKMNQYLGI

hide sequence

RefSeq Acc Id:

XP_013373096 ⟸ XM_013517642

- UniProtKB:

A0A8C2YLF0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQPAMMMFSSKYWARRGLSLDSAVPEEHQLLGSLTLNKASSSKSEDKKGNKGSSKSETSTESGK
TAVIFSLKNEVGGLVKALRIFQEKHVNMVHIESRRSRRRSSEVEIFVDCECGKTEFHELIQLLK
FQTTIVTLNPPESIWTEEEELEDVPWFPRKISELDKCSHRVLMYGTELDADHPGFKDNVYRQRR
KYFVDVAMSYKYGQPIPRVEYTEEETKTWSVVFRELSKLYPTHACREYLKNFPLLTKYCGYRED
NVPQLEDVSAFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYVRHGSDPLYTPEPDTCHE
LLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSS
IGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFAKSITRPFSVYF
NPYTQSIEVLKDTRSIENVVQDLRSDLNTVCDALNKMNQYLGI

hide sequence

RefSeq Acc Id:

XP_013373097 ⟸ XM_013517643

- UniProtKB:

A0A8C2YLF0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQPAMMMFSSKYWARRGLSLDSAVPEEHQLLGSLTLNKASSSKSEDKKGNKGSSKSETSTESGK
TAVIFSLKNEVGGLVKALRIFQEKHVNMVHIESRRSRRRSSEVEIFVDCECGKTEFHELIQLLK
FQTTIVTLNPPESIWTEEEELEDVPWFPRKISELDKCSHRVLMYGTELDADHPGFKDNVYRQRR
KYFVDVAMSYKYGQPIPRVEYTEEETKTWSVVFRELSKLYPTHACREYLKNFPLLTKYCGYRED
NVPQLEDVSAFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYVRHGSDPLYTPEPDTCHE
LLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSS
IGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFAKSITRPFSVYF
NPYTQSIEVLKDTRSIENVVQDLRSDLNTVCDALNKMNQYLGI

hide sequence

RefSeq Acc Id:

XP_013373099 ⟸ XM_013517645

- UniProtKB:

A0A8C2YLF0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQPAMMMFSSKYWARRGLSLDSAVPEEHQLLGSLTLNKASSSKSEDKKGNKGSSKSETSTESGK
TAVIFSLKNEVGGLVKALRIFQEKHVNMVHIESRRSRRRSSEVEIFVDCECGKTEFHELIQLLK
FQTTIVTLNPPESIWTEEEELEDVPWFPRKISELDKCSHRVLMYGTELDADHPGFKDNVYRQRR
KYFVDVAMSYKYGQPIPRVEYTEEETKTWSVVFRELSKLYPTHACREYLKNFPLLTKYCGYRED
NVPQLEDVSAFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYVRHGSDPLYTPEPDTCHE
LLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSS
IGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFAKSITRPFSVYF
NPYTQSIEVLKDTRSIENVVQDLRSDLNTVCDALNKMNQYLGI

hide sequence

RefSeq Acc Id:

ENSCLAP00000007272 ⟸ ENSCLAT00000007386

Protein Domains

ACT Biopterin-dependent aromatic amino acid hydroxylase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005112	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000007386	ENTREZGENE
	ENSCLAT00000007386.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.800.10	UniProtKB/TrEMBL
InterPro	ACT-like_dom_sf	UniProtKB/TrEMBL
	ACT_dom	UniProtKB/TrEMBL
	ArAA_hydroxylase	UniProtKB/TrEMBL
	ArAA_hydroxylase_Fe/CU_BS	UniProtKB/TrEMBL
	ArAA_hydroxylase_sf	UniProtKB/TrEMBL
	Aro-AA_hydroxylase_C_sf	UniProtKB/TrEMBL
	Aromatic-AA_hydroxylase_C	UniProtKB/TrEMBL
	Trp_5_mOase	UniProtKB/TrEMBL
	TrpOH_cat	UniProtKB/TrEMBL
	Tyrosine_3-monooxygenase-like	UniProtKB/TrEMBL
NCBI Gene	Tph2	ENTREZGENE
PANTHER	PTHR11473	UniProtKB/TrEMBL
	TRYPTOPHAN 5-HYDROXYLASE 2	UniProtKB/TrEMBL
Pfam	ACT	UniProtKB/TrEMBL
	Biopterin_H	UniProtKB/TrEMBL
PIRSF	PIRSF000336	UniProtKB/TrEMBL
PRINTS	FYWHYDRXLASE	UniProtKB/TrEMBL
PROSITE	ACT	UniProtKB/TrEMBL
	BH4_AAA_HYDROXYL_1	UniProtKB/TrEMBL
	BH4_AAA_HYDROXYL_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF55021	UniProtKB/TrEMBL
	SSF56534	UniProtKB/TrEMBL
UniProt	A0A8C2YLF0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM