Ext2 (exostosin glycosyltransferase 2) - Rat Genome Database

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Gene: Ext2 (exostosin glycosyltransferase 2) Chinchilla lanigera
Analyze
Symbol: Ext2
Name: exostosin glycosyltransferase 2
RGD ID: 8878308
Description: ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); chondrocyte differentiation (ortholog); endochondral bone morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); hereditary multiple exostoses (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: exostosin-2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554223,304,842 - 3,447,908 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554223,303,948 - 3,438,381 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ext2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554223,304,842 - 3,447,908 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554223,303,948 - 3,438,381 (-)NCBIChiLan1.0ChiLan1.0
EXT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381144,095,678 - 44,251,962 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1144,095,648 - 44,251,962 (+)EnsemblGRCh38hg38GRCh38
GRCh371144,117,228 - 44,273,512 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361144,073,675 - 44,223,556 (+)NCBINCBI36Build 36hg18NCBI36
Build 341144,073,674 - 44,223,555NCBI
Celera1144,264,389 - 44,414,268 (+)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1143,826,189 - 43,975,955 (+)NCBIHuRef
CHM1_11144,116,142 - 44,266,006 (+)NCBICHM1_1
T2T-CHM13v2.01144,251,025 - 44,407,303 (+)NCBIT2T-CHM13v2.0
Ext2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39293,525,978 - 93,652,913 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl293,491,373 - 93,652,913 (-)EnsemblGRCm39 Ensembl
GRCm38293,695,631 - 93,822,568 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl293,661,028 - 93,822,568 (-)EnsemblGRCm38mm10GRCm38
MGSCv37293,535,788 - 93,662,725 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36293,496,472 - 93,623,384 (-)NCBIMGSCv36mm8
Celera295,099,313 - 95,226,251 (-)NCBICelera
Cytogenetic Map2E1NCBI
cM Map251.62NCBI
Ext2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83100,120,776 - 100,253,424 (-)NCBIGRCr8
mRatBN7.2379,665,414 - 79,798,077 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl379,665,415 - 79,798,059 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx383,139,349 - 83,272,515 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0391,738,418 - 91,871,601 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0389,590,230 - 89,720,226 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0382,602,784 - 82,734,557 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl382,602,785 - 82,734,533 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0389,303,367 - 89,435,124 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4378,111,436 - 78,244,444 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1378,008,379 - 78,140,888 (-)NCBI
Celera378,867,721 - 79,000,170 (-)NCBICelera
Cytogenetic Map3q31NCBI
EXT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2946,310,432 - 46,458,880 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11146,316,398 - 46,464,742 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01144,055,670 - 44,204,055 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11144,551,242 - 44,699,447 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1144,522,797 - 44,699,447 (+)Ensemblpanpan1.1panPan2
EXT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11844,987,310 - 45,122,339 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1844,987,748 - 45,129,974 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1843,655,617 - 43,798,860 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01845,647,570 - 45,796,802 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1845,646,913 - 45,823,492 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11845,130,584 - 45,263,356 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01844,684,085 - 44,826,126 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01845,420,394 - 45,563,983 (-)NCBIUU_Cfam_GSD_1.0
Ext2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494722,233,504 - 22,377,538 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365624,342,874 - 4,489,180 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365624,345,146 - 4,489,180 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EXT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl218,209,102 - 18,232,025 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1218,099,790 - 18,239,229 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2219,709,056 - 19,849,479 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EXT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1121,077,159 - 21,282,317 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl121,119,987 - 21,281,635 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038118,305,404 - 118,502,345 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000021262   ⟹   ENSCLAP00000021061
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554223,304,842 - 3,447,908 (-)Ensembl
RefSeq Acc Id: XM_013514241   ⟹   XP_013369695
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554223,303,948 - 3,438,381 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013369695 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000021061
  ENSCLAP00000021061.1
RefSeq Acc Id: XP_013369695   ⟸   XM_013514241
- UniProtKB: A0A8C2W053 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000021061   ⟸   ENSCLAT00000021262

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014428 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000021262 ENTREZGENE
  ENSCLAT00000021262.1 UniProtKB/TrEMBL
InterPro Exostosin UniProtKB/TrEMBL
  Exostosin_GT47 UniProtKB/TrEMBL
  GT64 UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/TrEMBL
NCBI Gene Ext2 ENTREZGENE
PANTHER ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/TrEMBL
  ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/TrEMBL
Pfam Exostosin UniProtKB/TrEMBL
  Glyco_transf_64 UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/TrEMBL
UniProt A0A8C2W053 ENTREZGENE, UniProtKB/TrEMBL