Raf1 (Raf-1 proto-oncogene, serine/threonine kinase)

Gene: Raf1 (Raf-1 proto-oncogene, serine/threonine kinase) Chinchilla lanigera

Analyze

Symbol:

Raf1

Name:

Raf-1 proto-oncogene, serine/threonine kinase

RGD ID:

8850973

Description:

ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); ATP binding (ortholog); INVOLVED IN cell differentiation (ortholog); death-inducing signaling complex assembly (ortholog); ERBB2-ERBB3 signaling pathway (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiomegaly (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RAF proto-oncogene serine/threonine-protein kinase; v-raf-1 murine leukemia viral oncogene homolog 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	18,025,932 - 18,049,723 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	17,980,956 - 18,049,723 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

Cardiomegaly (ISO)

colorectal adenocarcinoma (ISO)

colorectal adenoma (ISO)

Colorectal Neoplasms (ISO)

dilated cardiomyopathy (ISO)

dilated cardiomyopathy 1B (ISO)

dilated cardiomyopathy 1NN (ISO)

Dilated Cardiomyopathy with Left Ventricular Noncompaction (ISO)

familial hypertrophic cardiomyopathy (ISO)

gastric adenocarcinoma (ISO)

genetic disease (ISO)

high grade glioma (ISO)

Hyperalgesia (ISO)

hypertrophic cardiomyopathy (ISO)

hypertrophic cardiomyopathy 1 (ISO)

ischemia (ISO)

Kidney Neoplasms (ISO)

Liver Neoplasms (ISO)

lung adenocarcinoma (ISO)

Lung Neoplasms (ISO)

lung non-small cell carcinoma (ISO)

Lymphangiectasis (ISO)

malignant mesothelioma (ISO)

melanoma (ISO)

Noonan syndrome (ISO)

Noonan syndrome 1 (ISO)

Noonan syndrome 3 (ISO)

Noonan syndrome 5 (ISO)

Noonan syndrome with multiple lentigines (ISO)

Noonan syndrome with multiple lentigines 2 (ISO)

ovarian carcinoma (ISO)

pancreatic adenocarcinoma (ISO)

pancreatic carcinoma (ISO)

Pituitary Stalk Interruption Syndrome (ISO)

prostate adenocarcinoma (ISO)

prostate cancer (ISO)

Prostatic Neoplasms (ISO)

RASopathy (ISO)

skin melanoma (ISO)

Stroke (ISO)

Ventricular Tachycardia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (ISO)

death-inducing signaling complex assembly (ISO)

ERBB2-ERBB3 signaling pathway (ISO)

extrinsic apoptotic signaling pathway via death domain receptors (ISO)

face development (ISO)

heart development (ISO)

insulin receptor signaling pathway (ISO)

insulin secretion involved in cellular response to glucose stimulus (ISO)

insulin-like growth factor receptor signaling pathway (ISO)

intermediate filament cytoskeleton organization (ISO)

intracellular glucose homeostasis (ISO)

MAPK cascade (ISO)

myelination (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of cell population proliferation (ISO)

negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ISO)

negative regulation of protein-containing complex assembly (ISO)

neurotrophin TRK receptor signaling pathway (ISO)

positive regulation of MAPK cascade (ISO)

positive regulation of peptidyl-serine phosphorylation (ISO)

positive regulation of protein phosphorylation (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

protein phosphorylation (ISO)

response to hypoxia (ISO)

response to muscle stretch (ISO)

Schwann cell development (ISO)

somatic stem cell population maintenance (ISO)

thymus development (ISO)

thyroid gland development (ISO)

type B pancreatic cell proliferation (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

Golgi apparatus (ISO)

plasma membrane (ISO)

pseudopodium (ISO)

Molecular Function

adenylate cyclase activator activity (ISO)

adenylate cyclase binding (ISO)

ATP binding (ISO)

enzyme binding (ISO)

identical protein binding (ISO)

MAP kinase kinase kinase activity (ISO)

mitogen-activated protein kinase kinase binding (ISO)

protein binding (ISO)

protein kinase activity (ISO)

protein serine/threonine kinase activity (ISO)

protein-containing complex binding (ISO)

small GTPase binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

altered extracellular signal-regulated Raf/Mek/Erk signaling pathway (ISO)

ceramide signaling pathway (ISO)

endothelin signaling pathway (ISO)

Fc epsilon receptor mediated signaling pathway (ISO)

granulocyte-macrophage colony-stimulating factor signaling pathway (ISO)

insulin signaling pathway (ISO)

insulin-like growth factor signaling pathway (ISO)

interleukin-2 signaling pathway (ISO)

mTOR signaling pathway (ISO)

phosphatidylinositol 3-kinase-Akt signaling pathway (ISO)

platelet-derived growth factor signaling pathway (ISO)

the extracellular signal-regulated Raf/Mek/Erk signaling pathway (ISO)

vascular endothelial growth factor signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Raf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	18,025,932 - 18,049,723 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	17,980,956 - 18,049,723 (+)	NCBI	ChiLan1.0	ChiLan1.0

RAF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	12,583,601 - 12,664,117 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	12,582,101 - 12,664,201 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	12,625,100 - 12,705,616 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	12,600,108 - 12,680,678 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	12,600,107 - 12,680,678	NCBI
Celera	3	12,563,426 - 12,643,994 (-)	NCBI		Celera
Cytogenetic Map	3	p25.2	NCBI
HuRef	3	12,559,317 - 12,640,382 (-)	NCBI		HuRef
CHM1_1	3	12,575,179 - 12,655,743 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	12,582,405 - 12,665,632 (-)	NCBI		T2T-CHM13v2.0

Raf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	115,595,530 - 115,653,596 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	115,595,028 - 115,653,596 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	115,618,569 - 115,676,635 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	115,618,067 - 115,676,635 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	115,568,591 - 115,626,653 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	115,584,216 - 115,642,122 (-)	NCBI		MGSCv36	mm8
Celera	6	117,458,696 - 117,516,733 (-)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	53.62	NCBI

Raf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	150,352,158 - 150,412,813 (-)	NCBI		GRCr8
mRatBN7.2	4	148,679,534 - 148,740,265 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	148,679,530 - 148,740,317 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	154,903,973 - 154,964,738 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	150,687,056 - 150,747,821 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	149,310,879 - 149,371,650 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	147,532,040 - 147,592,769 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	147,532,042 - 147,592,699 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	210,819,148 - 210,878,226 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	151,752,583 - 151,775,609 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	151,997,425 - 152,020,450 (-)	NCBI
Celera	4	137,570,499 - 137,631,125 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

RAF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	12,570,434 - 12,649,715 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	12,575,188 - 12,654,475 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	12,510,084 - 12,590,598 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	12,853,415 - 12,932,871 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	12,853,415 - 12,932,871 (-)	Ensembl	panpan1.1		panPan2

RAF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	5,892,839 - 5,972,672 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	5,892,834 - 5,972,090 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	5,929,501 - 6,009,310 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	5,921,808 - 6,000,868 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	5,921,827 - 6,000,864 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	5,637,969 - 5,717,035 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	5,991,105 - 6,070,948 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	5,966,879 - 6,046,000 (+)	NCBI		UU_Cfam_GSD_1.0

Raf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	17,795,336 - 17,819,736 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	1,051,205 - 1,117,096 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	1,089,979 - 1,114,376 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	68,580,812 - 68,657,829 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	68,581,128 - 68,657,911 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	75,848,344 - 75,927,158 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	48,560,270 - 48,643,537 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	48,561,161 - 48,618,020 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	117,857,289 - 117,941,171 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Raf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624872	204,357 - 269,135 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624872	204,357 - 284,487 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005387107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01028872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01028873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01028874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01086292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000015120 ⟹ ENSCLAP00000014961

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955429	18,025,932 - 18,049,723 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000015121 ⟹ ENSCLAP00000014962

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955429	18,028,467 - 18,049,009 (+)	Ensembl

RefSeq Acc Id:

XM_005387107 ⟹ XP_005387164

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955429	18,025,931 - 18,049,723 (+)	NCBI

Sequence:

show sequence

GGAGTGATGCCATGAGATTGCTATGATTGCCATGCAGTGCACCGGGGGCCACATTGTCAGACTG
GTGAGATGTGCAGGTTTCATTACTGCTTAAGCTGCATCCATGGAGCACATACAGGGTGCTTGGA
AGACGATCAGCAACGGTTTTGGACTTAAGGATGCTGTGTTTGACGGCTCCAGCTGCATCTCCCC
AACGATAGTGCAGCAGTTTGGCTATCAGCGCCGGGCCTCAGATGATGGCAAACTCACAGAGTCC
TCGAAGACGAGCAGCACCATCCGGGTCTTCTTGCCAAATAAGCAGAGAACGGTGGTCAACGTGC
GGAATGGGATGAGCTTGCACGACTGCCTTATGAAAGCACTCAAGGTGAGGGGCCTGCAACCAGA
GTGCTGTGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAAAAAAGCACGTTTAGATTGGAAT
ACTGATGCTGCCTCTTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGATCATGTTCCCCTCA
CAACACACAACTTTGCTCGGAAGACGTTCCTGAAGCTTGCCTTCTGTGACATCTGTCAGAAGTT
CCTGCTAAACGGGTTTCGATGTCAGACTTGTGGCTACAAATTTCATGAGCACTGTAGCACCAAA
GTCCCTACCATGTGTGTGGACTGGAGTAACATCAGACAGCTCTTGTTGTTTCCAAATTCCACTA
TTGGTGAAAGTGGGGTCCCAGCACTACCTTCTCTGACCATGCGTCGGATGCGAGAGTCTGTTTC
CCGGATGCCTGTTAGTTCCCAGCACAGGTATTCCACACCCCACGCCTTCACCTTCAACTCCTCC
AGCCCCTCCTCCGAAGGTTCCCTCTCCCAGAGACAGAGGTCGACGTCCACACCTAACGTCCACA
TGGTCAGCACAACGCTGCCTGTGGACAGCAGGATGATTGAGAATAACAGCCTGAATACTTCTCC
CAGGGCGTGGTCCAGAGGATTTTGTGTAAGGGGAAGAGATGCAATTCGAAGTCACAGCGAATCA
GCCTCCCCGTCAGCCCTGTCCAGCAGCCCCAACAACCTGAGCCCAACAGGCTGGTCACAGCCCA
AAGCCCCTGTGCCGGCACAGAGAGAGCGTGCTCCAGGACCTGGCACCCAGGAGAAGAACAAAAT
TAGGCCTCGTGGACAGAGAGATTCAAGTTATTACTGGGAAATAGAAGCCAGTGAAGTGATGCTG
TCCACCCGCATCGGGTCAGGCTCCTTTGGAACTGTCTATAAGGGCAAGTGGCATGGAGATGTGG
CGGTAAAGATCCTGAAGGTGGTGGACCCAACCCCAGAGCAGTTCCAGGCCTTCAGGAACGAGGT
GGCGGTGCTGCGCAAAACGCGGCATGTGAACATCCTGCTCTTTATGGGGTACATGACGAAGGAC
AACCTGGCGATTGTGACCCAGTGGTGTGAGGGTAGCAGCCTTTACAAACACCTGCATGTCCAGG
AGACCAAGTTCCAGATGTTCCAGCTGATTGACATCGCTCGACAGACAGCGCAGGGCATGGACTA
CTTGCACGCGAAGAACATCATCCACCGGGACATGAAATCCAACAACATATTTCTCCATGAAGGC
CTAACGGTGAAAATTGGCGATTTTGGTTTGGCGACAGTGAAGTCACGGTGGAGCGGCTCTCAGC
AGGTGGAGCAGCCCACTGGCTCTGTGCTGTGGATGGCCCCAGAGGTAATTCGCATGCAGGACAA
CAACCCGTTCAGCTTCCAGTCTGACGTCTACTCCTACGGCATCGTGCTATATGAGCTGATGACG
GGGGAGCTCCCCTACTCCCACATCAACAACCGCGACCAGATCATCTTCATGGTGGGCCGAGGTT
ATGCCTCGCCAGACCTCAGCAAGCTCTACAAGAACTGCCCCAAGGCCATGAAGCGGCTGGTGGC
GGACTGCGTGAAGAAAGTGAAGGAGGAGCGGCCTCTCTTCCCCCAGATCCTGTCTTCCATTGAG
CTGCTCCAGCACTCTTTACCCAAGATCAACCGGAGCGCGTCTGAGCCATCCCTGCACCGGGCAG
CGCACACTGAGGACATCAACGCATGTACGCTGACCACATCCCCGAGGCTACCTGTCTTCTAGTT
GGCTCTGCACCCAGGGAGGGAGGGAGTCAGCAGCACCACTCATCTACTGTCCTTGGGGCGAAGC
GCACGTGTCCAGAAAAGCTGCTAAGGACCTTCTAGACCACACACAGGGCCTTACTTCACGTTGC
CTTCTTCTCTACCCACGTGGCCCCAGAGGAGGAAGCTGGTCACCACCCTGCTGCCTCGCCCCTG
TGGGCCTAGCCTTCTCCAGGTGCACACATCTCACGCAATACTGCGCTGGGCCCTGGCGGGCAGC
AAGGGGGCGTATTTTGGGAGAGAAAGGTGGTGAACAGCCTGGCCCCATTGCGGGGACACATGGT
GTTTTGGAAATCGGCTTTTTCACCTCTCAGACGGTGCAGGGCCAGTTTTGCACATATTGCACCA
AACAGCCAGGACTGCCGGGACCCCAGCCGCAGAGAGCCTGCTTTTGGTACTATGGAACTCGACT
ATGGGGACGTGTCCCCATGTCCCATCTGCCCTCCCCAGGAGCAGCCCGCCTCACCGATTCTGTC
TTCCAGGAGCTGCCCCTGTCCCAGGGCAAGCGCCGGCCAGCCCTGTCCCCAGTCACCCTCAGTG
TTGTGTATGCAAGGAAGCCAGGACCCAGGTTTTCTTGATGATCTGGGTTTTAATTTTGTTTTTA
TTGCACCTGACAAGATACAAGTTATCTGATTGTTCCTCAATTATGTTATTTTAATAAAATAAAT
TAAATCTA

hide sequence

RefSeq Acc Id:

XM_005387108 ⟹ XP_005387165

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955429	17,980,956 - 18,049,723 (+)	NCBI

Sequence:

show sequence

GCACAGCCGGCCTCGCGGGAGCCTTGCGCGTCGAGGCGTTGGGAGGGACGGGTCAGTGACCCCG
AAGGAGGACTGAGGAGGGCGTTCAAGCCGAGGGATCCGCCGTTCCGAGGGACCGAGGCGTGTAG
GACTGGGGTTTCATTACTGCTTAAGCTGCATCCATGGAGCACATACAGGGTGCTTGGAAGACGA
TCAGCAACGGTTTTGGACTTAAGGATGCTGTGTTTGACGGCTCCAGCTGCATCTCCCCAACGAT
AGTGCAGCAGTTTGGCTATCAGCGCCGGGCCTCAGATGATGGCAAACTCACAGAGTCCTCGAAG
ACGAGCAGCACCATCCGGGTCTTCTTGCCAAATAAGCAGAGAACGGTGGTCAACGTGCGGAATG
GGATGAGCTTGCACGACTGCCTTATGAAAGCACTCAAGGTGAGGGGCCTGCAACCAGAGTGCTG
TGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAAAAAAGCACGTTTAGATTGGAATACTGAT
GCTGCCTCTTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGATCATGTTCCCCTCACAACAC
ACAACTTTGCTCGGAAGACGTTCCTGAAGCTTGCCTTCTGTGACATCTGTCAGAAGTTCCTGCT
AAACGGGTTTCGATGTCAGACTTGTGGCTACAAATTTCATGAGCACTGTAGCACCAAAGTCCCT
ACCATGTGTGTGGACTGGAGTAACATCAGACAGCTCTTGTTGTTTCCAAATTCCACTATTGGTG
AAAGTGGGGTCCCAGCACTACCTTCTCTGACCATGCGTCGGATGCGAGAGTCTGTTTCCCGGAT
GCCTGTTAGTTCCCAGCACAGGTATTCCACACCCCACGCCTTCACCTTCAACTCCTCCAGCCCC
TCCTCCGAAGGTTCCCTCTCCCAGAGACAGAGGTCGACGTCCACACCTAACGTCCACATGGTCA
GCACAACGCTGCCTGTGGACAGCAGGATGATTGAGAATAACAGCCTGAATACTTCTCCCAGGGC
GTGGTCCAGAGGATTTTGTGTAAGGGGAAGAGATGCAATTCGAAGTCACAGCGAATCAGCCTCC
CCGTCAGCCCTGTCCAGCAGCCCCAACAACCTGAGCCCAACAGGCTGGTCACAGCCCAAAGCCC
CTGTGCCGGCACAGAGAGAGCGTGCTCCAGGACCTGGCACCCAGGAGAAGAACAAAATTAGGCC
TCGTGGACAGAGAGATTCAAGTTATTACTGGGAAATAGAAGCCAGTGAAGTGATGCTGTCCACC
CGCATCGGGTCAGGCTCCTTTGGAACTGTCTATAAGGGCAAGTGGCATGGAGATGTGGCGGTAA
AGATCCTGAAGGTGGTGGACCCAACCCCAGAGCAGTTCCAGGCCTTCAGGAACGAGGTGGCGGT
GCTGCGCAAAACGCGGCATGTGAACATCCTGCTCTTTATGGGGTACATGACGAAGGACAACCTG
GCGATTGTGACCCAGTGGTGTGAGGGTAGCAGCCTTTACAAACACCTGCATGTCCAGGAGACCA
AGTTCCAGATGTTCCAGCTGATTGACATCGCTCGACAGACAGCGCAGGGCATGGACTACTTGCA
CGCGAAGAACATCATCCACCGGGACATGAAATCCAACAACATATTTCTCCATGAAGGCCTAACG
GTGAAAATTGGCGATTTTGGTTTGGCGACAGTGAAGTCACGGTGGAGCGGCTCTCAGCAGGTGG
AGCAGCCCACTGGCTCTGTGCTGTGGATGGCCCCAGAGGTAATTCGCATGCAGGACAACAACCC
GTTCAGCTTCCAGTCTGACGTCTACTCCTACGGCATCGTGCTATATGAGCTGATGACGGGGGAG
CTCCCCTACTCCCACATCAACAACCGCGACCAGATCATCTTCATGGTGGGCCGAGGTTATGCCT
CGCCAGACCTCAGCAAGCTCTACAAGAACTGCCCCAAGGCCATGAAGCGGCTGGTGGCGGACTG
CGTGAAGAAAGTGAAGGAGGAGCGGCCTCTCTTCCCCCAGATCCTGTCTTCCATTGAGCTGCTC
CAGCACTCTTTACCCAAGATCAACCGGAGCGCGTCTGAGCCATCCCTGCACCGGGCAGCGCACA
CTGAGGACATCAACGCATGTACGCTGACCACATCCCCGAGGCTACCTGTCTTCTAGTTGGCTCT
GCACCCAGGGAGGGAGGGAGTCAGCAGCACCACTCATCTACTGTCCTTGGGGCGAAGCGCACGT
GTCCAGAAAAGCTGCTAAGGACCTTCTAGACCACACACAGGGCCTTACTTCACGTTGCCTTCTT
CTCTACCCACGTGGCCCCAGAGGAGGAAGCTGGTCACCACCCTGCTGCCTCGCCCCTGTGGGCC
TAGCCTTCTCCAGGTGCACACATCTCACGCAATACTGCGCTGGGCCCTGGCGGGCAGCAAGGGG
GCGTATTTTGGGAGAGAAAGGTGGTGAACAGCCTGGCCCCATTGCGGGGACACATGGTGTTTTG
GAAATCGGCTTTTTCACCTCTCAGACGGTGCAGGGCCAGTTTTGCACATATTGCACCAAACAGC
CAGGACTGCCGGGACCCCAGCCGCAGAGAGCCTGCTTTTGGTACTATGGAACTCGACTATGGGG
ACGTGTCCCCATGTCCCATCTGCCCTCCCCAGGAGCAGCCCGCCTCACCGATTCTGTCTTCCAG
GAGCTGCCCCTGTCCCAGGGCAAGCGCCGGCCAGCCCTGTCCCCAGTCACCCTCAGTGTTGTGT
ATGCAAGGAAGCCAGGACCCAGGTTTTCTTGATGATCTGGGTTTTAATTTTGTTTTTATTGCAC
CTGACAAGATACAAGTTATCTGATTGTTCCTCAATTATGTTATTTTAATAAAATAAATTAAATC
TA

hide sequence

RefSeq Acc Id:

XM_005387109 ⟹ XP_005387166

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955429	18,025,932 - 18,049,723 (+)	NCBI

Sequence:

show sequence

GAGTGATGCCATGAGATTGCTATGATTGCCATGCAGTGCACCGGGGGCCACATTGTCAGACTGG
TGAGATGTGCAGGTTTCATTACTGCTTAAGCTGCATCCATGGAGCACATACAGGGTGCTTGGAA
GACGATCAGCAACGGTTTTGGACTTAAGGATGCTGTGTTTGACGGCTCCAGCTGCATCTCCCCA
ACGATAGTGCAGCAGTTTGGCTATCAGCGCCGGGCCTCAGATGATGGCAAACTCACAGAGTCCT
CGAAGACGAGCAGCACCATCCGGGTCTTCTTGCCAAATAAGCAGAGAACGGTGGTCAACGTGCG
GAATGGGATGAGCTTGCACGACTGCCTTATGAAAGCACTCAAGGTGAGGGGCCTGCAACCAGAG
TGCTGTGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAAAAAAGCACGTTTAGATTGGAATA
CTGATGCTGCCTCTTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGATCATGTTCCCCTCAC
AACACACAACTTTGCTCGGAAGACGTTCCTGAAGCTTGCCTTCTGTGACATCTGTCAGAAGTTC
CTGCTAAACGGGTTTCGATGTCAGACTTGTGGCTACAAATTTCATGAGCACTGTAGCACCAAAG
TCCCTACCATGTGTGTGGACTGGAGTAACATCAGACAGCTCTTGTTGTTTCCAAATTCCACTAT
TGGTGAAAGTGGGGTCCCAGCACTACCTTCTCTGACCATGCGTCGGATGCGAGAGTCTGTTTCC
CGGATGCCTGTTAGTTCCCAGCACAGGTATTCCACACCCCACGCCTTCACCTTCAACTCCTCCA
GCCCCTCCTCCGAAGGTTCCCTCTCCCAGAGACAGAGGTCGACGTCCACACCTAACGTCCACAT
GGTCAGCACAACGCTGCCTGTGGACAGCAGGATGATTGAGGATGCAATTCGAAGTCACAGCGAA
TCAGCCTCCCCGTCAGCCCTGTCCAGCAGCCCCAACAACCTGAGCCCAACAGGCTGGTCACAGC
CCAAAGCCCCTGTGCCGGCACAGAGAGAGCGTGCTCCAGGACCTGGCACCCAGGAGAAGAACAA
AATTAGGCCTCGTGGACAGAGAGATTCAAGTTATTACTGGGAAATAGAAGCCAGTGAAGTGATG
CTGTCCACCCGCATCGGGTCAGGCTCCTTTGGAACTGTCTATAAGGGCAAGTGGCATGGAGATG
TGGCGGTAAAGATCCTGAAGGTGGTGGACCCAACCCCAGAGCAGTTCCAGGCCTTCAGGAACGA
GGTGGCGGTGCTGCGCAAAACGCGGCATGTGAACATCCTGCTCTTTATGGGGTACATGACGAAG
GACAACCTGGCGATTGTGACCCAGTGGTGTGAGGGTAGCAGCCTTTACAAACACCTGCATGTCC
AGGAGACCAAGTTCCAGATGTTCCAGCTGATTGACATCGCTCGACAGACAGCGCAGGGCATGGA
CTACTTGCACGCGAAGAACATCATCCACCGGGACATGAAATCCAACAACATATTTCTCCATGAA
GGCCTAACGGTGAAAATTGGCGATTTTGGTTTGGCGACAGTGAAGTCACGGTGGAGCGGCTCTC
AGCAGGTGGAGCAGCCCACTGGCTCTGTGCTGTGGATGGCCCCAGAGGTAATTCGCATGCAGGA
CAACAACCCGTTCAGCTTCCAGTCTGACGTCTACTCCTACGGCATCGTGCTATATGAGCTGATG
ACGGGGGAGCTCCCCTACTCCCACATCAACAACCGCGACCAGATCATCTTCATGGTGGGCCGAG
GTTATGCCTCGCCAGACCTCAGCAAGCTCTACAAGAACTGCCCCAAGGCCATGAAGCGGCTGGT
GGCGGACTGCGTGAAGAAAGTGAAGGAGGAGCGGCCTCTCTTCCCCCAGATCCTGTCTTCCATT
GAGCTGCTCCAGCACTCTTTACCCAAGATCAACCGGAGCGCGTCTGAGCCATCCCTGCACCGGG
CAGCGCACACTGAGGACATCAACGCATGTACGCTGACCACATCCCCGAGGCTACCTGTCTTCTA
GTTGGCTCTGCACCCAGGGAGGGAGGGAGTCAGCAGCACCACTCATCTACTGTCCTTGGGGCGA
AGCGCACGTGTCCAGAAAAGCTGCTAAGGACCTTCTAGACCACACACAGGGCCTTACTTCACGT
TGCCTTCTTCTCTACCCACGTGGCCCCAGAGGAGGAAGCTGGTCACCACCCTGCTGCCTCGCCC
CTGTGGGCCTAGCCTTCTCCAGGTGCACACATCTCACGCAATACTGCGCTGGGCCCTGGCGGGC
AGCAAGGGGGCGTATTTTGGGAGAGAAAGGTGGTGAACAGCCTGGCCCCATTGCGGGGACACAT
GGTGTTTTGGAAATCGGCTTTTTCACCTCTCAGACGGTGCAGGGCCAGTTTTGCACATATTGCA
CCAAACAGCCAGGACTGCCGGGACCCCAGCCGCAGAGAGCCTGCTTTTGGTACTATGGAACTCG
ACTATGGGGACGTGTCCCCATGTCCCATCTGCCCTCCCCAGGAGCAGCCCGCCTCACCGATTCT
GTCTTCCAGGAGCTGCCCCTGTCCCAGGGCAAGCGCCGGCCAGCCCTGTCCCCAGTCACCCTCA
GTGTTGTGTATGCAAGGAAGCCAGGACCCAGGTTTTCTTGATGATCTGGGTTTTAATTTTGTTT
TTATTGCACCTGACAAGATACAAGTTATCTGATTGTTCCTCAATTATGTTATTTTAATAAAATA
AATTAAATCTA

hide sequence

RefSeq Acc Id:

XM_013515404 ⟹ XP_013370858

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955429	18,003,505 - 18,049,723 (+)	NCBI

Sequence:

show sequence

GACTCTCTTAAGAGGTAGTGGCACAGCGGGTGAGAATCACTGAATAGGAAAAGTAGCTTACTAT
GATTTTAAATGTTGAGCAGTGGTGAGAACCCCTAAAGGTTTCATTACTGCTTAAGCTGCATCCA
TGGAGCACATACAGGGTGCTTGGAAGACGATCAGCAACGGTTTTGGACTTAAGGATGCTGTGTT
TGACGGCTCCAGCTGCATCTCCCCAACGATAGTGCAGCAGTTTGGCTATCAGCGCCGGGCCTCA
GATGATGGCAAACTCACAGAGTCCTCGAAGACGAGCAGCACCATCCGGGTCTTCTTGCCAAATA
AGCAGAGAACGGTGGTCAACGTGCGGAATGGGATGAGCTTGCACGACTGCCTTATGAAAGCACT
CAAGGTGAGGGGCCTGCAACCAGAGTGCTGTGCAGTGTTCAGACTTCTCCACGAACACAAAGGT
AAAAAAGCACGTTTAGATTGGAATACTGATGCTGCCTCTTTGATTGGAGAAGAACTTCAAGTAG
ATTTCCTGGATCATGTTCCCCTCACAACACACAACTTTGCTCGGAAGACGTTCCTGAAGCTTGC
CTTCTGTGACATCTGTCAGAAGTTCCTGCTAAACGGGTTTCGATGTCAGACTTGTGGCTACAAA
TTTCATGAGCACTGTAGCACCAAAGTCCCTACCATGTGTGTGGACTGGAGTAACATCAGACAGC
TCTTGTTGTTTCCAAATTCCACTATTGGTGAAAGTGGGGTCCCAGCACTACCTTCTCTGACCAT
GCGTCGGATGCGAGAGTCTGTTTCCCGGATGCCTGTTAGTTCCCAGCACAGGTATTCCACACCC
CACGCCTTCACCTTCAACTCCTCCAGCCCCTCCTCCGAAGGTTCCCTCTCCCAGAGACAGAGGT
CGACGTCCACACCTAACGTCCACATGGTCAGCACAACGCTGCCTGTGGACAGCAGGATGATTGA
GAATAACAGCCTGAATACTTCTCCCAGGGCGTGGTCCAGAGGATTTTGTGTAAGGGGAAGAGAT
GCAATTCGAAGTCACAGCGAATCAGCCTCCCCGTCAGCCCTGTCCAGCAGCCCCAACAACCTGA
GCCCAACAGGCTGGTCACAGCCCAAAGCCCCTGTGCCGGCACAGAGAGAGCGTGCTCCAGGACC
TGGCACCCAGGAGAAGAACAAAATTAGGCCTCGTGGACAGAGAGATTCAAGTTATTACTGGGAA
ATAGAAGCCAGTGAAGTGATGCTGTCCACCCGCATCGGGTCAGGCTCCTTTGGAACTGTCTATA
AGGGCAAGTGGCATGGAGATGTGGCGGTAAAGATCCTGAAGGTGGTGGACCCAACCCCAGAGCA
GTTCCAGGCCTTCAGGAACGAGGTGGCGGTGCTGCGCAAAACGCGGCATGTGAACATCCTGCTC
TTTATGGGGTACATGACGAAGGACAACCTGGCGATTGTGACCCAGTGGTGTGAGGGTAGCAGCC
TTTACAAACACCTGCATGTCCAGGAGACCAAGTTCCAGATGTTCCAGCTGATTGACATCGCTCG
ACAGACAGCGCAGGGCATGGACTACTTGCACGCGAAGAACATCATCCACCGGGACATGAAATCC
AACAACATATTTCTCCATGAAGGCCTAACGGTGAAAATTGGCGATTTTGGTTTGGCGACAGTGA
AGTCACGGTGGAGCGGCTCTCAGCAGGTGGAGCAGCCCACTGGCTCTGTGCTGTGGATGGCCCC
AGAGGTAATTCGCATGCAGGACAACAACCCGTTCAGCTTCCAGTCTGACGTCTACTCCTACGGC
ATCGTGCTATATGAGCTGATGACGGGGGAGCTCCCCTACTCCCACATCAACAACCGCGACCAGA
TCATCTTCATGGTGGGCCGAGGTTATGCCTCGCCAGACCTCAGCAAGCTCTACAAGAACTGCCC
CAAGGCCATGAAGCGGCTGGTGGCGGACTGCGTGAAGAAAGTGAAGGAGGAGCGGCCTCTCTTC
CCCCAGATCCTGTCTTCCATTGAGCTGCTCCAGCACTCTTTACCCAAGATCAACCGGAGCGCGT
CTGAGCCATCCCTGCACCGGGCAGCGCACACTGAGGACATCAACGCATGTACGCTGACCACATC
CCCGAGGCTACCTGTCTTCTAGTTGGCTCTGCACCCAGGGAGGGAGGGAGTCAGCAGCACCACT
CATCTACTGTCCTTGGGGCGAAGCGCACGTGTCCAGAAAAGCTGCTAAGGACCTTCTAGACCAC
ACACAGGGCCTTACTTCACGTTGCCTTCTTCTCTACCCACGTGGCCCCAGAGGAGGAAGCTGGT
CACCACCCTGCTGCCTCGCCCCTGTGGGCCTAGCCTTCTCCAGGTGCACACATCTCACGCAATA
CTGCGCTGGGCCCTGGCGGGCAGCAAGGGGGCGTATTTTGGGAGAGAAAGGTGGTGAACAGCCT
GGCCCCATTGCGGGGACACATGGTGTTTTGGAAATCGGCTTTTTCACCTCTCAGACGGTGCAGG
GCCAGTTTTGCACATATTGCACCAAACAGCCAGGACTGCCGGGACCCCAGCCGCAGAGAGCCTG
CTTTTGGTACTATGGAACTCGACTATGGGGACGTGTCCCCATGTCCCATCTGCCCTCCCCAGGA
GCAGCCCGCCTCACCGATTCTGTCTTCCAGGAGCTGCCCCTGTCCCAGGGCAAGCGCCGGCCAG
CCCTGTCCCCAGTCACCCTCAGTGTTGTGTATGCAAGGAAGCCAGGACCCAGGTTTTCTTGATG
ATCTGGGTTTTAATTTTGTTTTTATTGCACCTGACAAGATACAAGTTATCTGATTGTTCCTCAA
TTATGTTATTTTAATAAAATAAATTAAATCTA

hide sequence

RefSeq Acc Id:

XM_013515405 ⟹ XP_013370859

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955429	18,007,347 - 18,049,723 (+)	NCBI

Sequence:

show sequence

GGAATGCAGGGATTACAGGTTTCATTACTGCTTAAGCTGCATCCATGGAGCACATACAGGGTGC
TTGGAAGACGATCAGCAACGGTTTTGGACTTAAGGATGCTGTGTTTGACGGCTCCAGCTGCATC
TCCCCAACGATAGTGCAGCAGTTTGGCTATCAGCGCCGGGCCTCAGATGATGGCAAACTCACAG
AGTCCTCGAAGACGAGCAGCACCATCCGGGTCTTCTTGCCAAATAAGCAGAGAACGGTGGTCAA
CGTGCGGAATGGGATGAGCTTGCACGACTGCCTTATGAAAGCACTCAAGGTGAGGGGCCTGCAA
CCAGAGTGCTGTGCAGTGTTCAGACTTCTCCACGAACACAAAGGTAAAAAAGCACGTTTAGATT
GGAATACTGATGCTGCCTCTTTGATTGGAGAAGAACTTCAAGTAGATTTCCTGGATCATGTTCC
CCTCACAACACACAACTTTGCTCGGAAGACGTTCCTGAAGCTTGCCTTCTGTGACATCTGTCAG
AAGTTCCTGCTAAACGGGTTTCGATGTCAGACTTGTGGCTACAAATTTCATGAGCACTGTAGCA
CCAAAGTCCCTACCATGTGTGTGGACTGGAGTAACATCAGACAGCTCTTGTTGTTTCCAAATTC
CACTATTGGTGAAAGTGGGGTCCCAGCACTACCTTCTCTGACCATGCGTCGGATGCGAGAGTCT
GTTTCCCGGATGCCTGTTAGTTCCCAGCACAGGTATTCCACACCCCACGCCTTCACCTTCAACT
CCTCCAGCCCCTCCTCCGAAGGTTCCCTCTCCCAGAGACAGAGGTCGACGTCCACACCTAACGT
CCACATGGTCAGCACAACGCTGCCTGTGGACAGCAGGATGATTGAGAATAACAGCCTGAATACT
TCTCCCAGGGCGTGGTCCAGAGGATTTTGTGTAAGGGGAAGAGATGCAATTCGAAGTCACAGCG
AATCAGCCTCCCCGTCAGCCCTGTCCAGCAGCCCCAACAACCTGAGCCCAACAGGCTGGTCACA
GCCCAAAGCCCCTGTGCCGGCACAGAGAGAGCGTGCTCCAGGACCTGGCACCCAGGAGAAGAAC
AAAATTAGGCCTCGTGGACAGAGAGATTCAAGTTATTACTGGGAAATAGAAGCCAGTGAAGTGA
TGCTGTCCACCCGCATCGGGTCAGGCTCCTTTGGAACTGTCTATAAGGGCAAGTGGCATGGAGA
TGTGGCGGTAAAGATCCTGAAGGTGGTGGACCCAACCCCAGAGCAGTTCCAGGCCTTCAGGAAC
GAGGTGGCGGTGCTGCGCAAAACGCGGCATGTGAACATCCTGCTCTTTATGGGGTACATGACGA
AGGACAACCTGGCGATTGTGACCCAGTGGTGTGAGGGTAGCAGCCTTTACAAACACCTGCATGT
CCAGGAGACCAAGTTCCAGATGTTCCAGCTGATTGACATCGCTCGACAGACAGCGCAGGGCATG
GACTACTTGCACGCGAAGAACATCATCCACCGGGACATGAAATCCAACAACATATTTCTCCATG
AAGGCCTAACGGTGAAAATTGGCGATTTTGGTTTGGCGACAGTGAAGTCACGGTGGAGCGGCTC
TCAGCAGGTGGAGCAGCCCACTGGCTCTGTGCTGTGGATGGCCCCAGAGGTAATTCGCATGCAG
GACAACAACCCGTTCAGCTTCCAGTCTGACGTCTACTCCTACGGCATCGTGCTATATGAGCTGA
TGACGGGGGAGCTCCCCTACTCCCACATCAACAACCGCGACCAGATCATCTTCATGGTGGGCCG
AGGTTATGCCTCGCCAGACCTCAGCAAGCTCTACAAGAACTGCCCCAAGGCCATGAAGCGGCTG
GTGGCGGACTGCGTGAAGAAAGTGAAGGAGGAGCGGCCTCTCTTCCCCCAGATCCTGTCTTCCA
TTGAGCTGCTCCAGCACTCTTTACCCAAGATCAACCGGAGCGCGTCTGAGCCATCCCTGCACCG
GGCAGCGCACACTGAGGACATCAACGCATGTACGCTGACCACATCCCCGAGGCTACCTGTCTTC
TAGTTGGCTCTGCACCCAGGGAGGGAGGGAGTCAGCAGCACCACTCATCTACTGTCCTTGGGGC
GAAGCGCACGTGTCCAGAAAAGCTGCTAAGGACCTTCTAGACCACACACAGGGCCTTACTTCAC
GTTGCCTTCTTCTCTACCCACGTGGCCCCAGAGGAGGAAGCTGGTCACCACCCTGCTGCCTCGC
CCCTGTGGGCCTAGCCTTCTCCAGGTGCACACATCTCACGCAATACTGCGCTGGGCCCTGGCGG
GCAGCAAGGGGGCGTATTTTGGGAGAGAAAGGTGGTGAACAGCCTGGCCCCATTGCGGGGACAC
ATGGTGTTTTGGAAATCGGCTTTTTCACCTCTCAGACGGTGCAGGGCCAGTTTTGCACATATTG
CACCAAACAGCCAGGACTGCCGGGACCCCAGCCGCAGAGAGCCTGCTTTTGGTACTATGGAACT
CGACTATGGGGACGTGTCCCCATGTCCCATCTGCCCTCCCCAGGAGCAGCCCGCCTCACCGATT
CTGTCTTCCAGGAGCTGCCCCTGTCCCAGGGCAAGCGCCGGCCAGCCCTGTCCCCAGTCACCCT
CAGTGTTGTGTATGCAAGGAAGCCAGGACCCAGGTTTTCTTGATGATCTGGGTTTTAATTTTGT
TTTTATTGCACCTGACAAGATACAAGTTATCTGATTGTTCCTCAATTATGTTATTTTAATAAAA
TAAATTAAATCTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005387164	(Get FASTA)	NCBI Sequence Viewer
	XP_005387165	(Get FASTA)	NCBI Sequence Viewer
	XP_005387166	(Get FASTA)	NCBI Sequence Viewer
	XP_013370858	(Get FASTA)	NCBI Sequence Viewer
	XP_013370859	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000014961
	ENSCLAP00000014961.1
	ENSCLAP00000014962
	ENSCLAP00000014962.1

RefSeq Acc Id:	XP_005387165 ⟸ XM_005387108
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VFT9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTESSKTSSTIRVFLPN KQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQV DFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQ LLLFPNSTIGESGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTFNSSSPSSEGSLSQRQR STSTPNVHMVSTTLPVDSRMIENNSLNTSPRAWSRGFCVRGRDAIRSHSESASPSALSSSPNNL SPTGWSQPKAPVPAQRERAPGPGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSS LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSA SEPSLHRAAHTEDINACTLTTSPRLPVF hide sequence

RefSeq Acc Id:	XP_005387164 ⟸ XM_005387107
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VFT9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTESSKTSSTIRVFLPN KQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQV DFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQ LLLFPNSTIGESGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTFNSSSPSSEGSLSQRQR STSTPNVHMVSTTLPVDSRMIENNSLNTSPRAWSRGFCVRGRDAIRSHSESASPSALSSSPNNL SPTGWSQPKAPVPAQRERAPGPGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSS LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSA SEPSLHRAAHTEDINACTLTTSPRLPVF hide sequence

RefSeq Acc Id:	XP_005387166 ⟸ XM_005387109
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VL96 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTESSKTSSTIRVFLPN KQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQV DFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQ LLLFPNSTIGESGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTFNSSSPSSEGSLSQRQR STSTPNVHMVSTTLPVDSRMIEDAIRSHSESASPSALSSSPNNLSPTGWSQPKAPVPAQRERAP GPGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTP EQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI ARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWM APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINACTLT TSPRLPVF hide sequence

RefSeq Acc Id:	XP_013370858 ⟸ XM_013515404
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VFT9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTESSKTSSTIRVFLPN KQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQV DFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQ LLLFPNSTIGESGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTFNSSSPSSEGSLSQRQR STSTPNVHMVSTTLPVDSRMIENNSLNTSPRAWSRGFCVRGRDAIRSHSESASPSALSSSPNNL SPTGWSQPKAPVPAQRERAPGPGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSS LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSA SEPSLHRAAHTEDINACTLTTSPRLPVF hide sequence

RefSeq Acc Id:	XP_013370859 ⟸ XM_013515405
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VFT9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTESSKTSSTIRVFLPN KQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQV DFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQ LLLFPNSTIGESGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTFNSSSPSSEGSLSQRQR STSTPNVHMVSTTLPVDSRMIENNSLNTSPRAWSRGFCVRGRDAIRSHSESASPSALSSSPNNL SPTGWSQPKAPVPAQRERAPGPGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSS LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ IIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSA SEPSLHRAAHTEDINACTLTTSPRLPVF hide sequence

RefSeq Acc Id:

ENSCLAP00000014961 ⟸ ENSCLAT00000015120

RefSeq Acc Id:

ENSCLAP00000014962 ⟸ ENSCLAT00000015121

Protein Domains

Phorbol-ester/DAG-type Protein kinase RBD

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000010316	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000015120	ENTREZGENE
	ENSCLAT00000015120.1	UniProtKB/TrEMBL
	ENSCLAT00000015121	ENTREZGENE
	ENSCLAT00000015121.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.60.20	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	C1-like_sf	UniProtKB/TrEMBL
	DAG/PE-bd	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	PE/DAG-bd	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	RBD_dom	UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
NCBI Gene	Raf1	ENTREZGENE
PANTHER	RAF PROTO-ONCOGENE SERINE_THREONINE-PROTEIN KINASE	UniProtKB/TrEMBL
	SERINE-THREONINE PROTEIN KINASE	UniProtKB/TrEMBL
Pfam	C1_1	UniProtKB/TrEMBL
	Pkinase	UniProtKB/TrEMBL
	RBD	UniProtKB/TrEMBL
PRINTS	DAGPEDOMAIN	UniProtKB/TrEMBL
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
	RBD	UniProtKB/TrEMBL
	ZF_DAG_PE_1	UniProtKB/TrEMBL
	ZF_DAG_PE_2	UniProtKB/TrEMBL
SMART	RBD	UniProtKB/TrEMBL
	S_TKc	UniProtKB/TrEMBL
	SM00109	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54236	UniProtKB/TrEMBL
	SSF56112	UniProtKB/TrEMBL
	SSF57889	UniProtKB/TrEMBL
UniProt	A0A8C2VFT9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VL96	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-25	Raf1	Raf-1 proto-oncogene, serine/threonine kinase		v-raf-1 murine leukemia viral oncogene homolog 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - PID (archival)