Acot7 (acyl-CoA thioesterase 7) - Rat Genome Database

Name: Acot7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Acot7 (acyl-CoA thioesterase 7) Chinchilla lanigera

Analyze

Symbol:

Acot7

Name:

acyl-CoA thioesterase 7

RGD ID:

8821238

Description:

ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); fatty acid catabolic process (ortholog); long-chain fatty-acyl-CoA catabolic process (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cytosolic acyl coenzyme A thioester hydrolase

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACOT7 (acyl-CoA thioesterase 7)	NCBI	Ortholog
Mus musculus (house mouse):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	6,188,102 - 6,259,110 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	6,188,102 - 6,258,230 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 1p36 deletion syndrome (ISO)

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

coenzyme A biosynthetic process (ISO)

fatty acid catabolic process (ISO)

long-chain fatty-acyl-CoA catabolic process (ISO)

medium-chain fatty acid biosynthetic process (ISO)

medium-chain fatty-acyl-CoA catabolic process (ISO)

palmitic acid biosynthetic process (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

mitochondrial matrix (ISO)

neuron projection (ISO)

neuronal cell body (ISO)

nucleoplasm (ISO)

Molecular Function

fatty acyl-CoA hydrolase activity (ISO)

fatty-acyl-CoA binding (ISO)

identical protein binding (ISO)

long-chain fatty acyl-CoA binding (ISO)

long-chain fatty acyl-CoA hydrolase activity (ISO)

protein binding (ISO)

protein homodimerization activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Acot7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	6,188,102 - 6,259,110 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	6,188,102 - 6,258,230 (+)	NCBI	ChiLan1.0	ChiLan1.0

ACOT7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	6,264,272 - 6,393,767 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	6,264,269 - 6,393,767 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	6,324,332 - 6,453,827 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	6,246,919 - 6,376,413 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	5,438,842 - 5,568,337 (-)	NCBI		Celera
Cytogenetic Map	1	p36.31	NCBI
HuRef	1	5,472,303 - 5,601,612 (-)	NCBI		HuRef
CHM1_1	1	6,312,939 - 6,442,400 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	5,789,916 - 5,919,409 (-)	NCBI		T2T-CHM13v2.0

Acot7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	152,258,872 - 152,356,312 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	152,262,591 - 152,356,312 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	152,178,100 - 152,271,855 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	152,178,134 - 152,271,855 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	151,552,209 - 151,645,964 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	151,021,934 - 151,115,647 (+)	NCBI		MGSCv36	mm8
Celera	4	154,464,405 - 154,558,717 (+)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	82.93	NCBI

Acot7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	167,969,284 - 168,062,033 (+)	NCBI		GRCr8
mRatBN7.2	5	162,686,562 - 162,779,309 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	162,684,645 - 162,779,309 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	165,389,812 - 165,482,377 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	167,211,405 - 167,303,979 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	167,173,603 - 167,266,173 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	169,357,582 - 169,450,215 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	169,357,517 - 169,450,219 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	172,912,096 - 173,003,554 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	169,409,306 - 169,501,907 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	169,419,590 - 169,512,094 (+)	NCBI
Celera	5	160,918,240 - 161,010,763 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

ACOT7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	221,834,121 - 221,959,854 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	220,475,344 - 220,601,209 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	5,030,488 - 5,154,800 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	6,287,177 - 6,402,767 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

ACOT7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	60,153,616 - 60,239,254 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	60,153,616 - 60,239,239 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	60,163,440 - 60,265,782 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	60,369,414 - 60,471,489 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	60,369,414 - 60,471,855 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	60,368,684 - 60,471,165 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	60,235,482 - 60,337,604 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	60,637,013 - 60,739,144 (-)	NCBI		UU_Cfam_GSD_1.0

Acot7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	30,626,783 - 30,710,871 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936623	1,112,338 - 1,191,064 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936623	1,112,021 - 1,191,190 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACOT7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	67,152,429 - 67,254,103 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	67,152,428 - 67,254,097 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	62,103,745 - 62,205,894 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACOT7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	125,345,636 - 125,474,650 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	125,345,670 - 125,474,690 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	29,408,450 - 29,580,377 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Acot7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	5,065,995 - 5,142,558 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624818	5,048,410 - 5,142,135 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005404096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005404097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013504310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01059113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01059114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01059115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01078626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000018098 ⟹ ENSCLAP00000017920

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955486	6,188,102 - 6,259,110 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000018099 ⟹ ENSCLAP00000017921

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955486	6,188,635 - 6,257,935 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000018100 ⟹ ENSCLAP00000017922

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955486	6,197,627 - 6,259,110 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000018101 ⟹ ENSCLAP00000017923

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955486	6,203,239 - 6,259,110 (+)	Ensembl

RefSeq Acc Id:

XM_005404096 ⟹ XP_005404153

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955486	6,188,102 - 6,258,230 (+)	NCBI

Sequence:

show sequence

GGAGGGATGGGGACTTACTCCCTCCTCCCTCTGCTCCTGGAGCCTTTGATGCTGGCCACAGTAG
CGTAGAAGGAACAAACACTTGGGAGAGGCCCCACCCCAGACCTGAGCTGTGCATCTTCGAAACC
TGCCACTCCCTCCGGCCCATGGCACCCGCCGACTTCCTTATCCTCGCTGCCGGGCCAGGGCCTC
TGTGCCCCTTGGCAGCCTCCCAGGCCTGCTGACAGCCACGTGCTGGGACCTCTTGGCCCAGAGG
GAGGCTAGGCAGAGGCGGCCAGGCCTGGATGAGTGGTTAAGGCTGGAGATGGGGCCGTGGGACT
GCCCTCCCACAGACAGGTAGTGCTCCGGCCCTGGCTTCCCCTCATTTGCTTCTGAGAGAGGTCA
GGCTGTGTGACTTCAGGTCGAGTCATGAATTCCTTCCGTCACTGAGCCCTGGAAGCCAAGGCCA
GCCGCCTCCCTGAGCAGGGCATTTGCTGCCGCCGAGCTGGCCGGGCACCATCAGAGCGAGAAAC
CTCCGGCCCACACACCGCAGGATGAAGCTGCTTGCCAGGGTTCTCCGCCTCCAGCTGCCCGGCA
GGCTGGCGGCCTCCGGGAGGCTTGGGGCCGGCCAGGAGCCGTCGGGGCCTGCGGGAAGATACTG
GGCCTCCGTCCGGGCTGTCAGGACCAGCCCCAAGCTCTCTCTTGCCGGACCTCACATCATTGCC
ACGGGAAGGATCATGCGGCCAGATGACGCTAACGTGGCGGGCAACGTCCACGGCGGAACCATCC
TGAAGATGATCGAGGAGGCCGGGGCCATCATCAGCACCCGGCACTGCAACAGCCAGAACGGGGA
GCGCTGTGTGGCCGCCCTGGCCCGGGTCGAGCGCACCGACTTCTTGTCGCCCATGTGCATTGGC
GAGGTGGCTCACGTCAGCGCAGAGATCACCTACACCTCCAAACACTCTGTGGAAGTCCAGGTCA
ACGTGATGTCCGAAAACATCCTCACAGGTGCCAAAAAGCTGACCAACAAGGCTACCCTGTGGTA
CGTGCCCCTGTCACTGAAGAACGTGGACAAGGTCCTCGAGGTGCCTCCTGTTGTGTACACCCGG
CAGGAGCAGGAGGAGGAGGGCCGGAAGCGGTATGAAGCCCAGAAACTGGAGCGCATGGAGACCA
AGTGGAGAAACGGGGACATCGTGCAGCCCGTCCTGAACCCAGAGCCCAACACCGTGAGCTACAG
CCAGTCGAGCCTGATCCACCTGGTGGGGCCCTCGGACTGCACCCTGCATGGCTTTGTGCACGGA
GGTGTCACCATGAAGCTCATGGACGAGGTGGCTGGGATTGTGGCCGCACGCCACTGCAAGACCA
ACATAGTCACGGCTTCTGTGGATGCCATTAATTTTCACGATAAGATCCGAAAAGGCTGTGTCAT
CACCATCTCTGGCCGCATGACCTTCACGAGCAACAAGTCCATGGAGATCGAGGTGCTGGTGGAT
GCCGACCCAGTGGTGGACAACTCGCAAAAGCGCTACCGAGCTGCCAGCGCCTTCTTCACCTACG
TGTCGCTGAGCCAGGAGGGCAAACCGCTGCCTGTGCCACAGCTGGTGCCCGAGACCGAGGATGA
GAAGAAGCGCTTCGAGGAAGGCAAAGGGCGATACCTGCAGATGAAGGCAAAGCGGCAGGGCCAG
GTGGAGCCTCAGCCCTAGACGCCCTCTTCGTGCCGCCGGGCCTGAGCTGCTGCGGTGACAGCCC
CGTGTCCTGTCACTTAGTCACCCCCTGGCCAAACCCCACTGCCCACTGCGAGCTGGTATTGTGT
GAAGTACCCGTGTGACGGTGTTAGCCTGCACCCTGTCCTGAACACCTGTGCACCAAAGCTTTAT
TTATGCCCTTCCAGTATAAGTGCTACACAGTATTGTCCCAACGCCAGTGGCGCCCTGGGGCCCC
CGTGTAAGGTATGTCACGAATCCAGCACCACTAATAAAGCTGCTGTTCGGCTGGACC

hide sequence

RefSeq Acc Id:

XM_005404097 ⟹ XP_005404154

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955486	6,197,627 - 6,258,230 (+)	NCBI

Sequence:

show sequence

GGGGGAGCGGCAGGGATGCGGGGCGCTGTGGTCACGCTGTGGCGGAGCTTGTCCCTTCAGGTCT
CCAGGAAGGGAGCCGCGAAGGCCTGTCGCGGGCAGAAGGTCAAGCAGATCATGCGGCCAGATGA
CGCTAACGTGGCGGGCAACGTCCACGGCGGAACCATCCTGAAGATGATCGAGGAGGCCGGGGCC
ATCATCAGCACCCGGCACTGCAACAGCCAGAACGGGGAGCGCTGTGTGGCCGCCCTGGCCCGGG
TCGAGCGCACCGACTTCTTGTCGCCCATGTGCATTGGCGAGGTGGCTCACGTCAGCGCAGAGAT
CACCTACACCTCCAAACACTCTGTGGAAGTCCAGGTCAACGTGATGTCCGAAAACATCCTCACA
GGTGCCAAAAAGCTGACCAACAAGGCTACCCTGTGGTACGTGCCCCTGTCACTGAAGAACGTGG
ACAAGGTCCTCGAGGTGCCTCCTGTTGTGTACACCCGGCAGGAGCAGGAGGAGGAGGGCCGGAA
GCGGTATGAAGCCCAGAAACTGGAGCGCATGGAGACCAAGTGGAGAAACGGGGACATCGTGCAG
CCCGTCCTGAACCCAGAGCCCAACACCGTGAGCTACAGCCAGTCGAGCCTGATCCACCTGGTGG
GGCCCTCGGACTGCACCCTGCATGGCTTTGTGCACGGAGGTGTCACCATGAAGCTCATGGACGA
GGTGGCTGGGATTGTGGCCGCACGCCACTGCAAGACCAACATAGTCACGGCTTCTGTGGATGCC
ATTAATTTTCACGATAAGATCCGAAAAGGCTGTGTCATCACCATCTCTGGCCGCATGACCTTCA
CGAGCAACAAGTCCATGGAGATCGAGGTGCTGGTGGATGCCGACCCAGTGGTGGACAACTCGCA
AAAGCGCTACCGAGCTGCCAGCGCCTTCTTCACCTACGTGTCGCTGAGCCAGGAGGGCAAACCG
CTGCCTGTGCCACAGCTGGTGCCCGAGACCGAGGATGAGAAGAAGCGCTTCGAGGAAGGCAAAG
GGCGATACCTGCAGATGAAGGCAAAGCGGCAGGGCCAGGTGGAGCCTCAGCCCTAGACGCCCTC
TTCGTGCCGCCGGGCCTGAGCTGCTGCGGTGACAGCCCCGTGTCCTGTCACTTAGTCACCCCCT
GGCCAAACCCCACTGCCCACTGCGAGCTGGTATTGTGTGAAGTACCCGTGTGACGGTGTTAGCC
TGCACCCTGTCCTGAACACCTGTGCACCAAAGCTTTATTTATGCCCTTCCAGTATAAGTGCTAC
ACAGTATTGTCCCAACGCCAGTGGCGCCCTGGGGCCCCCGTGTAAGGTATGTCACGAATCCAGC
ACCACTAATAAAGCTGCTGTTCGGCTGGACC

hide sequence

RefSeq Acc Id:

XM_013504310 ⟹ XP_013359764

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955486	6,203,752 - 6,258,230 (+)	NCBI

Sequence:

show sequence

GCCCCCGCCAGCCCCGCTCCGCCCACAGGTGTTCCCCACACTGTGCGCAGGTGACGGATCATGC
GGCCAGATGACGCTAACGTGGCGGGCAACGTCCACGGCGGAACCATCCTGAAGATGATCGAGGA
GGCCGGGGCCATCATCAGCACCCGGCACTGCAACAGCCAGAACGGGGAGCGCTGTGTGGCCGCC
CTGGCCCGGGTCGAGCGCACCGACTTCTTGTCGCCCATGTGCATTGGCGAGGTGGCTCACGTCA
GCGCAGAGATCACCTACACCTCCAAACACTCTGTGGAAGTCCAGGTCAACGTGATGTCCGAAAA
CATCCTCACAGGTGCCAAAAAGCTGACCAACAAGGCTACCCTGTGGTACGTGCCCCTGTCACTG
AAGAACGTGGACAAGGTCCTCGAGGTGCCTCCTGTTGTGTACACCCGGCAGGAGCAGGAGGAGG
AGGGCCGGAAGCGGTATGAAGCCCAGAAACTGGAGCGCATGGAGACCAAGTGGAGAAACGGGGA
CATCGTGCAGCCCGTCCTGAACCCAGAGCCCAACACCGTGAGCTACAGCCAGTCGAGCCTGATC
CACCTGGTGGGGCCCTCGGACTGCACCCTGCATGGCTTTGTGCACGGAGGTGTCACCATGAAGC
TCATGGACGAGGTGGCTGGGATTGTGGCCGCACGCCACTGCAAGACCAACATAGTCACGGCTTC
TGTGGATGCCATTAATTTTCACGATAAGATCCGAAAAGGCTGTGTCATCACCATCTCTGGCCGC
ATGACCTTCACGAGCAACAAGTCCATGGAGATCGAGGTGCTGGTGGATGCCGACCCAGTGGTGG
ACAACTCGCAAAAGCGCTACCGAGCTGCCAGCGCCTTCTTCACCTACGTGTCGCTGAGCCAGGA
GGGCAAACCGCTGCCTGTGCCACAGCTGGTGCCCGAGACCGAGGATGAGAAGAAGCGCTTCGAG
GAAGGCAAAGGGCGATACCTGCAGATGAAGGCAAAGCGGCAGGGCCAGGTGGAGCCTCAGCCCT
AGACGCCCTCTTCGTGCCGCCGGGCCTGAGCTGCTGCGGTGACAGCCCCGTGTCCTGTCACTTA
GTCACCCCCTGGCCAAACCCCACTGCCCACTGCGAGCTGGTATTGTGTGAAGTACCCGTGTGAC
GGTGTTAGCCTGCACCCTGTCCTGAACACCTGTGCACCAAAGCTTTATTTATGCCCTTCCAGTA
TAAGTGCTACACAGTATTGTCCCAACGCCAGTGGCGCCCTGGGGCCCCCGTGTAAGGTATGTCA
CGAATCCAGCACCACTAATAAAGCTGCTGTTCGGCTGGACC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005404153	(Get FASTA)	NCBI Sequence Viewer
	XP_005404154	(Get FASTA)	NCBI Sequence Viewer
	XP_013359764	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000017920
	ENSCLAP00000017920.1
	ENSCLAP00000017921.1
	ENSCLAP00000017922
	ENSCLAP00000017922.1
	ENSCLAP00000017923
	ENSCLAP00000017923.1

RefSeq Acc Id:	XP_005404153 ⟸ XM_005404096
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YRH7 (UniProtKB/TrEMBL), A0A8C2YRG8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLLARVLRLQLPGRLAASGRLGAGQEPSGPAGRYWASVRAVRTSPKLSLAGPHIIATGRIMRP DDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSA EITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYTRQEQEEEG RKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLM DEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDN SQKRYRAASAFFTYVSLSQEGKPLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGQVEPQP hide sequence

RefSeq Acc Id:	XP_005404154 ⟸ XM_005404097
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VMU8 (UniProtKB/TrEMBL), A0A8C2VV27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRGAVVTLWRSLSLQVSRKGAAKACRGQKVKQIMRPDDANVAGNVHGGTILKMIEEAGAIISTR HCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKL TNKATLWYVPLSLKNVDKVLEVPPVVYTRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNP EPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHD KIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTYVSLSQEGKPLPVPQ LVPETEDEKKRFEEGKGRYLQMKAKRQGQVEPQP hide sequence

RefSeq Acc Id:	XP_013359764 ⟸ XM_013504310
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2VV27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAH VSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYTRQEQE EEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTM KLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPV VDNSQKRYRAASAFFTYVSLSQEGKPLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGQVEPQ P hide sequence

RefSeq Acc Id:

ENSCLAP00000017922 ⟸ ENSCLAT00000018100

RefSeq Acc Id:

ENSCLAP00000017923 ⟸ ENSCLAT00000018101

RefSeq Acc Id:

ENSCLAP00000017920 ⟸ ENSCLAT00000018098

RefSeq Acc Id:

ENSCLAP00000017921 ⟸ ENSCLAT00000018099

Protein Domains

HotDog ACOT-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000012294	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000018098	ENTREZGENE
	ENSCLAT00000018098.1	UniProtKB/TrEMBL
	ENSCLAT00000018099.1	UniProtKB/TrEMBL
	ENSCLAT00000018100	ENTREZGENE
	ENSCLAT00000018100.1	UniProtKB/TrEMBL
	ENSCLAT00000018101	ENTREZGENE
	ENSCLAT00000018101.1	UniProtKB/TrEMBL
Gene3D-CATH	Hotdog Thioesterase	UniProtKB/TrEMBL
InterPro	Cytosol_ACT	UniProtKB/TrEMBL
	HOTDOG_ACOT	UniProtKB/TrEMBL
	HotDog_dom_sf	UniProtKB/TrEMBL
	Thioestr_dom	UniProtKB/TrEMBL
NCBI Gene	Acot7	ENTREZGENE
PANTHER	CYTOSOLIC ACYL COENZYME A THIOESTER HYDROLASE	UniProtKB/TrEMBL
	PTHR11049	UniProtKB/TrEMBL
Pfam	4HBT	UniProtKB/TrEMBL
PROSITE	HOTDOG_ACOT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54637	UniProtKB/TrEMBL
UniProt	A0A8C2VMU8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2VV27	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YRG8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YRH7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar