Has2 (hyaluronan synthase 2) - Rat Genome Database

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Gene: Has2 (hyaluronan synthase 2) Chinchilla lanigera
Analyze
Symbol: Has2
Name: hyaluronan synthase 2
RGD ID: 8813105
Description: ENCODES a protein that exhibits hyaluronan synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); bone morphogenesis (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); diabetes insipidus (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955540593,316 - 609,865 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955540593,316 - 609,760 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Has2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955540593,316 - 609,865 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955540593,316 - 609,760 (-)NCBIChiLan1.0ChiLan1.0
HAS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388121,612,116 - 121,641,440 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8121,612,116 - 121,641,440 (-)EnsemblGRCh38hg38GRCh38
GRCh378122,624,356 - 122,653,680 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368122,694,719 - 122,722,811 (-)NCBINCBI36Build 36hg18NCBI36
Build 348122,694,720 - 122,722,811NCBI
Celera8118,814,049 - 118,842,240 (-)NCBICelera
Cytogenetic Map8q24.13NCBI
HuRef8117,950,042 - 117,978,400 (-)NCBIHuRef
CHM1_18122,665,454 - 122,693,813 (-)NCBICHM1_1
T2T-CHM13v2.08122,742,348 - 122,771,670 (-)NCBIT2T-CHM13v2.0
Has2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391556,529,023 - 56,557,942 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1556,529,023 - 56,557,935 (-)EnsemblGRCm39 Ensembl
GRCm381556,665,627 - 56,694,546 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1556,665,627 - 56,694,539 (-)EnsemblGRCm38mm10GRCm38
MGSCv371556,497,182 - 56,526,101 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361556,495,712 - 56,524,587 (-)NCBIMGSCv36mm8
Celera1558,189,438 - 58,218,384 (-)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1523.31NCBI
Has2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8790,002,929 - 90,028,933 (-)NCBIGRCr8
mRatBN7.2788,113,326 - 88,139,337 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl788,113,326 - 88,128,933 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx789,997,804 - 90,023,812 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0792,199,040 - 92,225,048 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0792,001,677 - 92,027,674 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0796,438,046 - 96,464,049 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl796,438,046 - 96,464,049 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0797,055,458 - 97,081,461 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4793,230,135 - 93,256,139 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1793,264,364 - 93,290,369 (-)NCBI
Celera784,901,996 - 84,927,998 (-)NCBICelera
RH 3.4 Map7607.6RGD
Cytogenetic Map7q33NCBI
HAS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27139,047,958 - 139,077,299 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18114,560,317 - 114,589,433 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08118,313,186 - 118,342,160 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18121,073,419 - 121,101,450 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8121,072,154 - 121,089,365 (-)Ensemblpanpan1.1panPan2
HAS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11320,310,946 - 20,342,647 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1320,309,872 - 20,341,636 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1320,341,670 - 20,392,564 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01320,646,614 - 20,697,736 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1320,647,874 - 20,664,774 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11320,379,420 - 20,429,051 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01320,482,900 - 20,533,502 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01320,720,804 - 20,770,669 (-)NCBIUU_Cfam_GSD_1.0
Has2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530317,991,598 - 18,018,681 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647025,418,063 - 25,444,634 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647025,418,069 - 25,443,332 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SHAS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl417,596,492 - 17,615,480 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1417,583,154 - 17,613,524 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2418,458,703 - 18,489,076 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HAS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18116,199,516 - 116,228,705 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8116,200,799 - 116,228,788 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603924,042,921 - 24,072,107 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Has2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473533,095,515 - 33,121,237 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473533,095,441 - 33,121,030 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000002425   ⟹   ENSCLAP00000002374
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955540593,316 - 609,865 (-)Ensembl
RefSeq Acc Id: XM_005410908   ⟹   XP_005410965
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955540593,316 - 609,760 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005410965 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000002374
  ENSCLAP00000002374.1
Reference Protein Sequences
RefSeq Acc Id: XP_005410965   ⟸   XM_005410908
- UniProtKB: A0A8C2YJ35 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000002374   ⟸   ENSCLAT00000002425
Protein Domains
Glycosyltransferase 2-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001723 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000002425 ENTREZGENE
  ENSCLAT00000002425.1 UniProtKB/TrEMBL
InterPro Glyco_trans_2-like UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/TrEMBL
NCBI Gene Has2 ENTREZGENE
PANTHER HYALURONAN SYNTHASE UniProtKB/TrEMBL
  PTHR22913:SF7 UniProtKB/TrEMBL
Pfam Chitin_synth_2 UniProtKB/TrEMBL
  Glycos_transf_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/TrEMBL
UniProt A0A8C2YJ35 ENTREZGENE, UniProtKB/TrEMBL