Ak3 (adenylate kinase 3) - Rat Genome Database

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Gene: Ak3 (adenylate kinase 3) Chinchilla lanigera
Analyze
Symbol: Ak3
Name: adenylate kinase 3
RGD ID: 8718147
Description: ENCODES a protein that exhibits adenylate kinase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); AMP phosphorylation (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo purine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH chromosome 9p deletion syndrome (ortholog); chronic lymphocytic leukemia (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GTP:AMP phosphotransferase AK3, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554349,000,158 - 9,011,250 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554348,998,357 - 9,010,468 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ak3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554349,000,158 - 9,011,250 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554348,998,357 - 9,010,468 (-)NCBIChiLan1.0ChiLan1.0
AK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3894,709,556 - 4,742,043 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl94,709,556 - 4,742,043 (-)EnsemblGRCh38hg38GRCh38
GRCh3794,709,556 - 4,742,043 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3694,701,158 - 4,731,227 (-)NCBINCBI36Build 36hg18NCBI36
Build 3494,701,157 - 4,731,227NCBI
Celera94,633,666 - 4,666,796 (-)NCBICelera
Cytogenetic Map9p24.1NCBI
HuRef94,664,901 - 4,697,611 (-)NCBIHuRef
CHM1_194,709,623 - 4,742,326 (-)NCBICHM1_1
T2T-CHM13v2.094,713,232 - 4,747,171 (-)NCBIT2T-CHM13v2.0
Ak3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391928,968,715 - 29,026,122 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1928,998,233 - 29,025,361 (-)EnsemblGRCm39 Ensembl
GRCm381928,995,053 - 29,048,080 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1929,020,833 - 29,047,961 (-)EnsemblGRCm38mm10GRCm38
MGSCv371929,095,322 - 29,122,392 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361929,086,829 - 29,113,899 (-)NCBIMGSCv36mm8
Celera1929,796,177 - 29,823,247 (-)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1923.61NCBI
Ak3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81236,151,012 - 236,178,689 (-)NCBIGRCr8
mRatBN7.21226,737,472 - 226,764,647 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1226,739,318 - 226,764,625 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1235,141,055 - 235,168,255 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01242,070,711 - 242,097,905 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01234,895,974 - 234,923,033 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,144,486 - 247,169,690 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,144,491 - 247,169,693 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01254,383,079 - 254,408,283 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41232,658,879 - 232,684,083 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11232,822,906 - 232,848,106 (-)NCBI
Celera1223,892,190 - 223,917,394 (-)NCBICelera
Cytogenetic Map1q52NCBI
AK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211119,815,241 - 119,882,802 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19119,821,189 - 119,854,215 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v094,541,984 - 4,576,341 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.194,731,024 - 4,744,093 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl94,732,847 - 4,762,900 (-)Ensemblpanpan1.1panPan2
LOC480491
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1910,282,452 - 10,283,479 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha910,012,102 - 10,013,357 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0910,553,806 - 10,556,217 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1910,883,676 - 10,884,902 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0916,637,073 - 16,638,328 (-)NCBIUNSW_CanFamBas_1.0
Ak3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947140,655,993 - 140,675,527 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936503496,965 - 516,888 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936503497,391 - 517,011 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1217,236,482 - 217,261,367 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11217,236,561 - 217,263,144 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21243,072,971 - 243,096,935 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11274,801,673 - 74,832,838 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1274,801,671 - 74,835,475 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603863,130,542 - 63,161,692 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ak3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247369,428,736 - 9,494,645 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000009199   ⟹   ENSCLAP00000009070
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554349,000,158 - 9,011,250 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000009200   ⟹   ENSCLAP00000009071
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554349,000,158 - 9,010,577 (-)Ensembl
RefSeq Acc Id: XM_013516310   ⟹   XP_013371764
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554348,998,357 - 9,010,468 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013371764 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000009070
  ENSCLAP00000009070.1
  ENSCLAP00000009071.1
RefSeq Acc Id: XP_013371764   ⟸   XM_013516310
- Sequence:
RefSeq Acc Id: ENSCLAP00000009070   ⟸   ENSCLAT00000009199
RefSeq Acc Id: ENSCLAP00000009071   ⟸   ENSCLAT00000009200

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000006329 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000009199 ENTREZGENE
  ENSCLAT00000009199.1 UniProtKB/TrEMBL
  ENSCLAT00000009200.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro Adenylat/UMP-CMP_kin UniProtKB/TrEMBL
  Adenylat_kinase_CS UniProtKB/TrEMBL
  Adenylate_kinase_lid-dom UniProtKB/TrEMBL
  ADK_active_lid_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Ak3 ENTREZGENE
PANTHER GTP:AMP PHOSPHOTRANSFERASE AK3, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR23359 UniProtKB/TrEMBL
Pfam ADK UniProtKB/TrEMBL
  ADK_lid UniProtKB/TrEMBL
PRINTS ADENYLTKNASE UniProtKB/TrEMBL
PROSITE ADENYLATE_KINASE UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
  SSF57774 UniProtKB/TrEMBL
UniProt A0A8C2V1V6_CHILA UniProtKB/TrEMBL
  A0A8C2V2B9_CHILA UniProtKB/TrEMBL