LOC102546303 (uncharacterized LOC102546303) - Rat Genome Database

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Gene: LOC102546303 (uncharacterized LOC102546303) Rattus norvegicus
Analyze
Symbol: LOC102546303
Name: uncharacterized LOC102546303
RGD ID: 7721989
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81687,333,811 - 87,341,652 (+)NCBIGRCr8
mRatBN7.21680,632,004 - 80,639,847 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01686,446,387 - 86,466,153 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01685,870,485 - 85,887,222 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1678,399,406 - 78,419,219 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102546303
36 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_005495131
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81687,333,811 - 87,341,652 (+)NCBI
mRatBN7.21680,632,004 - 80,639,847 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-10605 BioCyc
NCBI Gene LOC102546303 ENTREZGENE
PhenoGen LOC102546303 PhenoGen
RNAcentral URS0000CCF31B RNACentral
  URS0000CD0240 RNACentral
  URS0000CD04B2 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102546303  uncharacterized LOC102546303      Symbol and Name status set to provisional 70820 PROVISIONAL