Gene: LOC102550135 (uncharacterized LOC102550135) Rattus norvegicus |
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Analyze |
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Symbol: |
LOC102550135 |
Name: |
uncharacterized LOC102550135 |
RGD ID: |
7712236 |
Description: |
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Type: |
ncrna
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RefSeq Status: |
MODEL |
Latest Assembly: |
mRatBN7.2 - mRatBN7.2 Assembly |
Position: |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 47,967,249 - 48,049,082 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 34,498,104 - 34,579,531 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 11 | 35,464,598 - 35,547,668 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 39,053,667 - 39,133,432 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 11 | 33,877,214 - 33,957,687 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q11 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (mRatBN7.2)
1598842 | Glom10 | Glomerulus QTL 10 | 3.4 | | kidney glomerulus morphology trait (VT:0005325) | index of glomerular damage (CMO:0001135) | 11 | 1 | 35331169 | Rat | 1300147 | Bp187 | Blood pressure QTL 187 | 3.67 | | arterial blood pressure trait (VT:2000000) | blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) | 11 | 1 | 69446234 | Rat | 1558659 | Tescar1 | Testicular tumor resistance QTL 1 | 3.9 | | testis integrity trait (VT:0010572) | percentage of study population developing testis tumors during a period of time (CMO:0001261) | 11 | 1041931 | 66113562 | Rat | 1641927 | Alcrsp10 | Alcohol response QTL 10 | | | alcohol metabolism trait (VT:0015089) | blood ethanol level (CMO:0000535) | 11 | 8436674 | 53436674 | Rat | 724517 | Uae18 | Urinary albumin excretion QTL 18 | 3.7 | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 11 | 16472047 | 44285911 | Rat | 724554 | Iddm17 | Insulin dependent diabetes mellitus QTL 17 | | 0.001 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 11 | 18976208 | 86241447 | Rat | 10058952 | Gmadr6 | Adrenal mass QTL 6 | 2.29 | 0.0072 | adrenal gland mass (VT:0010420) | both adrenal glands wet weight to body weight ratio (CMO:0002411) | 11 | 22959403 | 67959403 | Rat | 8694376 | Bw156 | Body weight QTL 156 | 2.25 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 11 | 23280456 | 68280456 | Rat | 9590313 | Scort20 | Serum corticosterone level QTL 20 | 6.51 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 11 | 23280456 | 68280456 | Rat | 9589032 | Epfw10 | Epididymal fat weight QTL 10 | 9.29 | 0.001 | epididymal fat pad mass (VT:0010421) | epididymal fat pad weight to body weight ratio (CMO:0000658) | 11 | 23280456 | 68280456 | Rat | 8694424 | Bw162 | Body weight QTL 162 | 3.8 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 11 | 23280456 | 68280456 | Rat | 724563 | Uae10 | Urinary albumin excretion QTL 10 | 6 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 11 | 27672410 | 82846715 | Rat | 1300130 | Rf20 | Renal function QTL 20 | 4.44 | | kidney glomerulus integrity trait (VT:0010546) | kidney glomerulus diameter (CMO:0001166) | 11 | 29528418 | 60324829 | Rat | 1300110 | Stl7 | Serum triglyceride level QTL 7 | 4.64 | | blood triglyceride amount (VT:0002644) | plasma triglyceride level (CMO:0000548) | 11 | 29528418 | 82566702 | Rat | 2298551 | Neuinf10 | Neuroinflammation QTL 10 | 3.7 | | nervous system integrity trait (VT:0010566) | spinal cord beta-2 microglobulin mRNA level (CMO:0002125) | 11 | 31239134 | 78851519 | Rat | |
Expression
Sequence
RefSeq Acc Id: |
XR_001840477 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 11 | 47,967,249 - 48,049,082 (-) | NCBI | mRatBN7.2 | 11 | 34,498,104 - 34,579,531 (-) | NCBI | Rnor_6.0 | 11 | 35,464,598 - 35,547,668 (-) | NCBI |
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Sequence: |
CACACACACACACAACATGCACAGATACATGTATGCCTCCCCTCTAACAAGCACAGAAGCCTTT TCAGATTTCTTCCTTGAAGGGAAGAGGCATGCCCTCAGCCCTGAGGGAAGGAGCCAAAAAGCCT GTTTTTTGTTAGTTCTGGGCCTGCTGGCAATGAGCCACCTGTGGGCTCCCTCTTTTGTCCCCCA AAAATGTGAGCTGTCTGCACTGGTTACAAGTGGGAGATGAGGACATTGGGGAGCAGCACTTTTG GCCAGGGATGTTGGTGGGAGGAAGGAGGCGGGTAAGAGGAGGGAGGGCTTCTTAAAAATGTATT CCCCTGAAGCCAGCAGGACTGCACACACACTTCCGCTAAGCCTGTTTCCCTAAGTCCCCCCATG CCACTCAAGCGCGTAACTCAGAAGAGAGGCTTCCTTTGCTCCCTACCGAATCACGTTTTCTTGG GTGGATGTTAAGACAACGGGCAAAAACGAGCTAAAGTTTGGCAGTCTCCAGCCGTATGTGGGAA TGCCACACGTGACCTCTGGGTCATGTTCCATGGTCATTTATTCTACTTCTGGAGGGAGCTATTA GGAAATCAAACCCCAGGAAGATTTGGGACAAGCATGGCCCTGGGACCCATGTGCCAGGAAGCTG ATAAGGATGTTCAGGATTCTCTCCGTCAGAGCCTACGAGAAGTTCAAACCTCACACACCCCCTG TTCATGTGCTAGGACCATCCTCTACCTGTGAGAGCATCCTGGTTTGACCCCTTCCCCAAGGAAA CACTGATGCTAGACGCTCCCCATCAGCAGGATCAGGCTGTGCTGGAGTTCATCCTGAGATTGGA TTTTAATCATCTCCTTTATCTTTGGAGCTCCTGACTGCCTCCAGAATGATTGATCTCCTTCCCC ATCATCTGCCACAGTTCCAGACACCATGCTTGGCGTCACTGAGAATGAGCTAAGTCGCTCAGAA GAATGTCATTTTGCTCTGGGCAGAGGTTGTTTTATTGTCTATTCAGAAGGGGGAACAAAAATAT TCATTGGGAGG
hide sequence
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RefSeq Acc Id: |
XR_005491274 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 11 | 47,982,671 - 48,049,081 (-) | NCBI | mRatBN7.2 | 11 | 34,513,103 - 34,579,529 (-) | NCBI |
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RefSeq Acc Id: |
XR_358198 |
Type: |
NON-CODING |
Position: |
Rat Assembly | Chr | Position (strand) | Source |
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GRCr8 | 11 | 47,967,249 - 48,049,081 (-) | NCBI | mRatBN7.2 | 11 | 34,498,971 - 34,579,529 (-) | NCBI | Rnor_6.0 | 11 | 35,466,606 - 35,547,668 (-) | NCBI | Rnor_5.0 | 11 | 39,053,667 - 39,133,432 (-) | NCBI |
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Sequence: |
CACACACACACACAACATGCACAGATACATGTATGCCTCCCCTCTAACAAGCACAGAAGCCTTT TCAGATTTCTTCCTTGAAGGGAAGAGGCATGCCCTCAGCCCTGAGGGAAGGAGCCAAAAAGCCT GTTTTTTGTTAGTTCTGGGCCTGCTGGCAATGAGCCACCTGTGGGCTCCCTCTTTTGTCCCCCA AAAATGTGAGCTGTCTGCACTGGTTACAAGTGGGAGATGAGGACATTGGGGAGCAGCACTTTTG GCCAGGGATGTTGGTGGGAGGAAGGAGGCGGGTAAGAGGAGGGAGGGCTTCTTAAAAATGTATT CCCCTGAAGCCAGCAGGACTGCACACACACTTCCGCTAAGCCTGTTTCCCTAAGTCCCCCCATG CCACTCAAGCGCGTAACTCAGAAGAGAGGCTTCCTTTGCTCCCTACCGAATCACGTTTTCTTGG GTGGATGTTAAGACAACGGGCAAAAACGAGCTAAAGTTTGGCAGTCTCCAGCCGTATGTGGGAA TGCCACACGTGACCTCTGGGTCATGTTCCATGGTCATTTATTCTACTTCTGGAGGGAGCTATTA GGAAATCAAACCCCAGGAAGATTTGGGACAAGCATGGCCCTGGGACCCATGTGCCAGGAAGCTG ATAAGGATGTTCAGGATTCTCTCCGTCAGAGCCTACGAGAAGTTCAAACCTCACACACCCCCTG TTCATGTGCTAGGACCATCCTCTACCTGTGAGAGCATCCTGGTTTGACCCCTTCCCCAAGGAAA CACTGATGCTAGACGCTCCCCATCAGCAGGATCAGGCTGTGCTGGAGTTCATCCTGAGATTGGA TTTTAATCATCTCCTTTATCTTTGGAGCTCCTGACTGCCTCCAGAATGATTGATCTCCTTCCCC ATCATCTGCCACAGTTCCAGACACCATGCTTGGCGTCACTGAGAATGAGCTAAGTCGCTCAGAA GAATGTCATTTTGCTCTGGGCAGAGGTTGTTTTATTGTCTATTCAGGTAAGATGCATATACAGT GGAGATGGCTGGGAAAGGCTCAGGGCACAGGTTTTGTCAGCAGAGACCAAACAGGTACTGTGGG TTTAAGGAATTCACCCAGAGTTGGTCACTCTTTCTAGTGACCGCTTATCTTTACACTACAGGTG TGCCACACCTGATCCCTTTCTGTCTGGACTCTTCCCAGAAACAAAACACTGCCAAATGCTTTCC TCTCATTGCCTTTTTTTTTCTTGTTTCTTCACTATCAAAGGGCTAAAAACAAACACCTAAGACC AGGAACACTCATACCTGCCACTCCTGGTAACTCCCCTGCTCCACACTCCACACCTGCCTTTTCT GTAACTGCCCCTGCCCTGATCGGCTAGAATATTCTAAATCTACAGACTGCATTTTGTCTTGTTA ACTAGTCTTTCAGAACGATCCCTAGCCTGTAGTATTTGGATTTCGATGGCCATGAAGTACCCAG ATCTCATTAGTAGTCACCAAGGATTCAACACCTTCAGGTCAGCATTTGAGTAAAACTTAAAGCC ATGTTTCCCTAGCTTGGGAACACCCCCAAAGACACCTCTGTAGAATCTGGTTTGAGAAACAACA CATTGAAAGTTAAATGTTGCTCATGGAGACAGTACTGCAATGTCGACAGAACCTTAAACCCTGA CAGAAATGTGGCCCCTGATATATCCTTAAAACGTATTGTCCAAATAACTCGTAACATGAACATA AAAGCAGCTTGCATAAAGGAAAAACATTAAAGGCAGGTCATCATGAATTCCAGAGAATGGAGCC ATAAAGCTGCACGATCATCTTGTACATTCCAAGAATCTGAGGTGACCAAGCACCTACAGACTTT TCCTTGTGAACGCTCAGCCTTTTACTAAAGTCTGTTTTCTGGTGTCTCTGTGACCCCCGAATGA CAGAACTCAAATGTCTCTGACATGTCAGATTTTTAAGTTAAGCATAGGAAAAGATTTGCTCATG TCTTCACTGAGACATCCAGGGGGTACTCACAGCTGTGACCTACAGTTACCCATGGCCCTATATT CCCCAGGGATTCATGGGCTGTGACCTATACTGTGACCTGAGCTCCTACACTTCAAGGGATCCAG TGGCCATTGTTCTCTTGAAAGTCTGAATAGTTTTCACCAGGTGCTGAGCATTTCCGTTTTGCCC CTCCCCTTAAAATATACAATTATGGAGACACATCCCCATTTACTGCCAGGTGGCTAAGTGACAC AAGCCAGGCTGGGAGAAACTGTAGTGAAAACTGGTTCCATGTGACCATGGTGCACTGATAGGAA ACTGAAGATTCGAGGAAGACTCCTCGGGGAAAAAGAAGTGTGAGTCGGGTTATTAGAGGCTGCC TCTGTGTGATCCAGTGGCCAAAATCTGGAGCTGGATTTTTAAAAAATAGACTTTATTCCAAAGA GAGAAAGCAAGGGAGAGACTTGAGAGCTCACTGGCTCTCTAGAAAGTGCAGGAAAAAGCAATGT ATTGATAAGAAGCAGAACCCTGCTTCAGAGACTCAGACTCCTGATCAGAGGAACACCAGTGATG CGAGAGGTGGGAGTCCTACCCCCAGGACACACTCATATACCCCCCCAAAACCTCAAATCCAGTT GTGAGTCTTGGTGAGGTAGTGACCCCTCGGACAGGCAGTGTTTTCAATCTGTAAGATTCAGGGT GCAGTGGCCAGGTGTCACATTCAGAGAGGAGTTGTGTAATACAGAACACAAACTGACTGAAGGA TAAAGTCACATGATTAGCTCTCAACAGATGCCAAAACAGTTTTGACAAAGTTTAACATCCCTTC ATGATAAGAGAATAGAAGAAGCATACTTCGACATGGTGCGCACACACACACACACACA
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2013-12-18 |
LOC102550135 |
uncharacterized LOC102550135 |
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Symbol and Name status set to provisional |
70820 |
PROVISIONAL |
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