Zfp119bl (zinc finger protein 119b like) - Rat Genome Database

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Gene: Zfp119bl (zinc finger protein 119b like) Rattus norvegicus
Analyze
Symbol: Zfp119bl (Ensembl: LOC102555289)
Name: zinc finger protein 119b like (Ensembl:zinc finger protein 709-like)
RGD ID: 7694240
Description: Predicted to enable metal ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102555289; zinc finger protein 239-like; zinc finger protein 431-like; zinc finger protein 501-like; zinc finger protein 709-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89833,319 - 863,123 (-)NCBIGRCr8
mRatBN7.29746,126 - 775,933 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl9746,365 - 789,822 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0911,123,877 - 11,151,368 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0910,107,807 - 10,136,509 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,732,497 - 7,760,426 (+)NCBICelera
Cytogenetic Map9q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

References

Genomics

Variants

.
Variants in Zfp119bl
81 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054141Gmadr4Adrenal mass QTL 42.450.0074adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)9114209783Rat
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat


Expression


Sequence


RefSeq Acc Id: ENSRNOT00000114772   ⟹   ENSRNOP00000077024
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl9746,365 - 773,988 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000119342   ⟹   ENSRNOP00000082709
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl9746,365 - 789,822 (-)Ensembl
RefSeq Acc Id: XM_006244394   ⟹   XP_006244456
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 861,250 (-)NCBI
mRatBN7.29746,126 - 774,042 (-)NCBI
Rnor_6.0911,123,877 - 11,151,368 (+)NCBI
Rnor_5.0910,107,807 - 10,136,509 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006244395   ⟹   XP_006244457
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 851,125 (-)NCBI
mRatBN7.29746,126 - 763,934 (-)NCBI
Rnor_6.0911,133,630 - 11,151,368 (+)NCBI
Rnor_5.0910,107,807 - 10,136,509 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006244396   ⟹   XP_006244458
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 849,922 (-)NCBI
mRatBN7.29746,126 - 756,293 (-)NCBI
Rnor_6.0911,141,268 - 11,151,368 (+)NCBI
Rnor_5.0910,107,807 - 10,136,509 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039084322   ⟹   XP_038940250
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 861,154 (-)NCBI
mRatBN7.29746,126 - 773,965 (-)NCBI
RefSeq Acc Id: XM_039084323   ⟹   XP_038940251
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 858,711 (-)NCBI
mRatBN7.29746,126 - 773,527 (-)NCBI
RefSeq Acc Id: XM_039084324   ⟹   XP_038940252
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 863,123 (-)NCBI
mRatBN7.29746,126 - 775,933 (-)NCBI
RefSeq Acc Id: XM_039084325   ⟹   XP_038940253
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 861,199 (-)NCBI
mRatBN7.29746,126 - 774,018 (-)NCBI
RefSeq Acc Id: XM_039084326   ⟹   XP_038940254
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89833,319 - 849,564 (-)NCBI
mRatBN7.29746,126 - 762,278 (-)NCBI
RefSeq Acc Id: XR_010054903
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr89834,961 - 861,154 (-)NCBI
RefSeq Acc Id: XP_006244456   ⟸   XM_006244394
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y998 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244457   ⟸   XM_006244395
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZU10 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244458   ⟸   XM_006244396
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_038940252   ⟸   XM_039084324
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZU10 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940253   ⟸   XM_039084325
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038940250   ⟸   XM_039084322
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038940251   ⟸   XM_039084323
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZU10 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940254   ⟸   XM_039084326
- Peptide Label: isoform X5
RefSeq Acc Id: ENSRNOP00000077024   ⟸   ENSRNOT00000114772
RefSeq Acc Id: ENSRNOP00000082709   ⟸   ENSRNOT00000119342
Protein Domains
C2H2-type   KRAB

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-28577 BioCyc
Ensembl Genes ENSRNOG00000069449 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000114772.1 UniProtKB/TrEMBL
  ENSRNOT00000119342.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report rno:102555289 UniProtKB/TrEMBL
NCBI Gene LOC102555289 ENTREZGENE
PANTHER KRAB AND ZINC FINGER DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 709 UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PhenoGen Zfp119bl PhenoGen
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000069449 RatGTEx
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A8I5Y998 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZU10 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Zfp119bl  zinc finger protein 119b like  LOC102555289  zinc finger protein 709-like  Symbol and Name Changed 1299863 APPROVED
2013-12-18 LOC102555289  zinc finger protein 709-like      Symbol and Name status set to provisional 70820 PROVISIONAL