LOC102547478 (uncharacterized LOC102547478) - Rat Genome Database

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Gene: LOC102547478 (uncharacterized LOC102547478) Rattus norvegicus
Analyze
Symbol: LOC102547478
Name: uncharacterized LOC102547478
RGD ID: 7578732
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87136,117,169 - 136,122,125 (+)NCBIGRCr8
mRatBN7.27134,238,367 - 134,243,663 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.07144,725,178 - 144,730,116 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07142,511,874 - 142,516,807 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera7130,664,279 - 130,669,578 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102547478
17 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7119513385135012528Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_005487430
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87136,117,169 - 136,122,125 (+)NCBI
mRatBN7.27134,238,705 - 134,243,663 (+)NCBI
RefSeq Acc Id: XR_010053539
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87136,117,174 - 136,122,125 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-31892 BioCyc
NCBI Gene LOC102547478 ENTREZGENE
PhenoGen LOC102547478 PhenoGen
RNAcentral URS0000CCE68D RNACentral
  URS0000CD059B RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102547478  uncharacterized LOC102547478      Symbol and Name status set to provisional 70820 PROVISIONAL