Zfp933l1 (zinc finger protein 933) - Rat Genome Database

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Gene: Zfp933l1 (zinc finger protein 933) Rattus norvegicus
Analyze
Symbol: Zfp933l1 (Ensembl: LOC102550729)
Name: zinc finger protein 933 (Ensembl:zinc finger protein 120-like)
RGD ID: 7528461
Description: Predicted to be involved in regulation of DNA-templated transcription.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102550729; zinc finger protein 120-like; zinc finger protein 431-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81270,279,732 - 270,292,057 (+)NCBIGRCr8
mRatBN7.21260,293,716 - 260,306,040 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1260,287,649 - 260,304,266 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01282,541,758 - 282,552,098 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01289,877,474 - 289,887,629 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1255,933,241 - 255,947,104 (+)NCBICelera
Cytogenetic Map1q55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Zfp933l1
24 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1210702053260522016Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1216255568260522016Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1216255568260522016Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1221414816260522016Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1223201027260522016Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1225126575260522016Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1233948574260522016Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
631836Stl31Serum triglyceride level QTL 314.640.00000487blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1237147813260522016Rat
71112Bw115Body weight QTL 11560.0001body mass (VT:0001259)body weight (CMO:0000012)1259647732260522016Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000096728   ⟹   ENSRNOP00000083433
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1260,287,649 - 260,304,266 (+)Ensembl
RefSeq Acc Id: XM_039101464   ⟹   XP_038957392
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81270,279,732 - 270,292,057 (+)NCBI
mRatBN7.21260,293,716 - 260,306,040 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038957392 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000083433.1
Reference Protein Sequences
RefSeq Acc Id: XP_038957392   ⟸   XM_039101464
RefSeq Acc Id: ENSRNOP00000083433   ⟸   ENSRNOT00000096728
Protein Domains
KRAB

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-55213 BioCyc
Ensembl Genes ENSRNOG00000066489 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000096728.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
KEGG Report rno:102550729 UniProtKB/TrEMBL
NCBI Gene LOC102550729 ENTREZGENE
PANTHER GENE 10130-RELATED UniProtKB/TrEMBL
  ZNF44 PROTEIN UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
PhenoGen Zfp933l1 PhenoGen
PROSITE KRAB UniProtKB/TrEMBL
RatGTEx ENSRNOG00000066489 RatGTEx
SMART KRAB UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
UniProt A0A8I5ZZC9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Zfp933l1  zinc finger protein 933  LOC102550729  zinc finger protein 120-like  Symbol and Name Changed 1299863 APPROVED
2013-12-17 LOC102550729  zinc finger protein 120-like      Symbol and Name status set to provisional 70820 PROVISIONAL