LOC102556488 (uncharacterized LOC102556488) - Rat Genome Database

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Gene: LOC102556488 (uncharacterized LOC102556488) Rattus norvegicus
Analyze
Symbol: LOC102556488
Name: uncharacterized LOC102556488
RGD ID: 7514024
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: LOC102556336; uncharacterized LOC102556336
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82050,825,460 - 50,856,591 (+)NCBIGRCr8
mRatBN7.22049,243,240 - 49,274,162 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.02050,868,489 - 50,876,746 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02052,483,073 - 52,484,840 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2050,792,568 - 50,800,825 (-)NCBICelera
Cytogenetic Map20q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102556488
272 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201175751554435887Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201175751554435887Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201769755054435887Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)201919072154435887Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202510672254435887Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202510672254435887Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202510672254435887Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202520973454435887Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202924438854435887Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_005497513
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82050,825,469 - 50,856,591 (+)NCBI
mRatBN7.22049,243,248 - 49,274,162 (+)NCBI
RefSeq Acc Id: XR_010060919
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82050,825,460 - 50,856,591 (+)NCBI
RefSeq Acc Id: XR_010060920
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82050,825,460 - 50,856,591 (+)NCBI
RefSeq Acc Id: XR_010060921
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82050,825,460 - 50,856,591 (+)NCBI
RefSeq Acc Id: XR_010060922
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82050,825,460 - 50,844,484 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3254 BioCyc
NCBI Gene LOC102556488 ENTREZGENE
PhenoGen LOC102556488 PhenoGen
RNAcentral URS0000CCF373 RNACentral
  URS0000CCF3BC RNACentral
  URS0000CD08CF RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 LOC102556488  uncharacterized LOC102556488  LOC102556336  uncharacterized LOC102556336  Data merged from RGD:7513980 737654 PROVISIONAL
2013-12-17 LOC102556488  uncharacterized LOC102556488      Symbol and Name status set to provisional 70820 PROVISIONAL
2013-12-17 LOC102556336  uncharacterized LOC102556336      Symbol and Name status set to provisional 70820 PROVISIONAL