LOC102551428 (uncharacterized LOC102551428) - Rat Genome Database

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Gene: LOC102551428 (uncharacterized LOC102551428) Rattus norvegicus
Analyze
Symbol: LOC102551428
Name: uncharacterized LOC102551428
RGD ID: 7505436
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: uncharacterized protein LOC102551428
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X15,715,924 - 15,781,522 (-)NCBIGRCr8
mRatBN7.2X13,044,284 - 13,071,506 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X13,829,538 - 13,843,858 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X14,614,938 - 14,628,872 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX13,653,158 - 13,665,617 (-)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102551428
247 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X144797220991088Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144812931706553Rat
631204Gluco15Glucose level QTL 150.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X162371522646544Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_017588174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017588175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001834979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001842670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001842671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010061332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_589635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_597521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XR_010061314
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061315
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061316
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061317
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061318
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061319
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061320
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061321
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061322
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061323
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061324
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061325
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061326
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061327
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061328
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061329
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061330
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061331
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI
RefSeq Acc Id: XR_010061332
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X15,715,924 - 15,781,522 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3008 BioCyc
NCBI Gene LOC102551428 ENTREZGENE
PhenoGen LOC102551428 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-17 LOC102551428  uncharacterized LOC102551428      Symbol and Name status set to provisional 70820 PROVISIONAL