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Gene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 1-chloro-2,4-dinitrobenzene | affects expression | ISO | RGD:737466 | 6480464 | Dinitrochlorobenzene affects the expression of CTLA4 mRNA | CTD | PMID:22302311 | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:737466 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of CTLA4 protein; more ... | CTD | PMID:18684927 | 3H-1,2-dithiole-3-thione | increases expression | ISO | RGD:61975 | 6480464 | 1,2-dithiol-3-thione results in increased expression of CTLA4 mRNA | CTD | PMID:19162173 | 4,4'-diaminodiphenylmethane | increases expression | ISO | RGD:737466 | 6480464 | 4,4'-diaminodiphenylmethane results in increased expression of CTLA4 mRNA | CTD | PMID:18648102 | 5-aza-2'-deoxycytidine | increases expression | ISO | RGD:737466 | 6480464 | decitabine results in increased expression of CTLA4 protein | CTD | PMID:19545742 | alpha-hexylcinnamaldehyde | affects expression | ISO | RGD:737466 | 6480464 | hexyl cinnamic aldehyde affects the expression of CTLA4 mRNA | CTD | PMID:22302311 | amiodarone | increases expression | EXP | | 6480464 | Amiodarone results in increased expression of CTLA4 mRNA | CTD | PMID:19774075 | ammonium chloride | affects expression | ISO | RGD:61975 | 6480464 | Ammonium Chloride affects the expression of CTLA4 mRNA | CTD | PMID:16483693 | benzo[a]pyrene | increases expression | EXP | | 6480464 | Benzo(a)pyrene results in increased expression of CTLA4 mRNA | CTD | PMID:22316170 | benzo[a]pyrene | increases expression | ISO | RGD:737466 | 6480464 | Benzo(a)pyrene results in increased expression of CTLA4 mRNA | CTD | PMID:22228805 | dibutyl phthalate | increases expression | ISO | RGD:61975 | 6480464 | Dibutyl Phthalate results in increased expression of CTLA4 mRNA | CTD | PMID:21266533 | glucuronoxylomannan | increases expression | EXP | | 6480464 | glucuronoxylomannan results in increased expression of CTLA4 protein | CTD | PMID:12864811 | nonanoic acid | affects expression | ISO | RGD:737466 | 6480464 | pelargonic acid affects the expression of CTLA4 mRNA | CTD | PMID:22302311 | phthalaldehyde | affects expression | ISO | RGD:737466 | 6480464 | o-Phthalaldehyde affects the expression of CTLA4 mRNA | CTD | PMID:22302311 | pirinixic acid | multiple interactions | ISO | RGD:737466 | 6480464 | NCF1 protein promotes the reaction [pirinixic acid results in decreased expression of CTLA4 mRNA] | CTD | PMID:17950772 | pirinixic acid | decreases expression | ISO | RGD:737466 | 6480464 | pirinixic acid results in decreased expression of CTLA4 mRNA | CTD | PMID:17950772 | simvastatin | decreases expression | EXP | | 6480464 | Simvastatin results in decreased expression of CTLA4 mRNA | CTD | PMID:18453621 | testosterone | increases expression | ISO | RGD:737466 | 6480464 | Testosterone results in increased expression of CTLA4 mRNA | CTD | PMID:15788153 | trichostatin A | increases expression | ISO | RGD:737466 | 6480464 | trichostatin A results in increased expression of CTLA4 protein | CTD | PMID:19545742 | trimellitic anhydride | increases expression | ISO | RGD:737466 | 6480464 | trimellitic anhydride results in increased expression of CTLA4 mRNA | CTD | PMID:19042947 | trimellitic anhydride | affects expression | ISO | RGD:737466 | 6480464 | trimellitic anhydride affects the expression of CTLA4 mRNA | CTD | PMID:22302311 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Molecular Pathway Annotations| External Database Links | |
| KEGG Pathway | Autoimmune thyroid disease |
| Cell adhesion molecules (CAMs) | |
| Rheumatoid arthritis | |
| T cell receptor signaling pathway | |
| Pathway Interaction Database | Calcineurin-regulated NFAT-dependent transcription in lymphocytes (PID:200050) |
Phenotype Annotations
Disease Annotations
Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| KEGG Pathway | Autoimmune thyroid disease |
| Cell adhesion molecules (CAMs) | |
| Rheumatoid arthritis | |
| T cell receptor signaling pathway | |
| Pathway Interaction Database | Calcineurin-regulated NFAT-dependent transcription in lymphocytes (PID:200050) |
Phenotype Annotations
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RGD Disease Portals| CTLA4 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| CTLA4 (Homo sapiens) |
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| Ctla4 (Mus musculus) |
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| Ctla4 (Rattus norvegicus) |
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Position Markers| STS-M37245 |
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| GDB:180415 |
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QTLs in Region (Human Genome Assembly GRCh37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NG_011502 | (Get FASTA) | Search GEO for Microarray Profiles |
| NM_001037631 | (Get FASTA) | Search GEO for Microarray Profiles | |
| NM_005214 | (Get FASTA) | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | ABBA01062619 | (Get FASTA) | Search GEO for Microarray Profiles |
| AC010138 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF142144 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF316875 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF411058 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF414120 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF486806 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK313732 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01011418 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AY209009 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AY792514 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AY999702 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC069566 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC070162 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC074842 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC074893 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BG058720 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CD639535 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH471063 | (Get FASTA) | Search GEO for Microarray Profiles | |
| DQ357942 | (Get FASTA) | Search GEO for Microarray Profiles | |
| DQ534200 | (Get FASTA) | Search GEO for Microarray Profiles | |
| DQ785106 | (Get FASTA) | Search GEO for Microarray Profiles | |
| GN344047 | (Get FASTA) | Search GEO for Microarray Profiles | |
| L15006 | (Get FASTA) | Search GEO for Microarray Profiles | |
| M74363 | (Get FASTA) | Search GEO for Microarray Profiles | |
| U90273 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_005214 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_005205 | |||||||||||||||||||||||||
| Peptide Label: | isoform CTLA4-TM precursor | |||||||||||||||||||||||||
| Position: |
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| RefSeq Acc Id: | NM_001037631 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_001032720 | |||||||||||||||||||||||||
| Peptide Label: | isoform CTLA-4delTM precursor | |||||||||||||||||||||||||
| Position: |
|
Protein Sequences| Protein RefSeqs | NP_001032720 | (Get FASTA) |
| NP_005205 | (Get FASTA) | |
| GenBank Protein | AAA52127 | (Get FASTA) |
| AAB59385 | (Get FASTA) | |
| AAD00698 | (Get FASTA) | |
| AAF02499 | (Get FASTA) | |
| AAH69566 | (Get FASTA) | |
| AAH70162 | (Get FASTA) | |
| AAH74842 | (Get FASTA) | |
| AAH74893 | (Get FASTA) | |
| AAK13084 | (Get FASTA) | |
| AAL07473 | (Get FASTA) | |
| AAL40932 | (Get FASTA) | |
| AAL96664 | (Get FASTA) | |
| AAO17066 | (Get FASTA) | |
| AAV66331 | (Get FASTA) | |
| AAX93176 | (Get FASTA) | |
| AAY00166 | (Get FASTA) | |
| ABC67470 | (Get FASTA) | |
| ABG79000 | (Get FASTA) | |
| ABG85285 | (Get FASTA) | |
| BAG36473 | (Get FASTA) | |
| CAY55959 | (Get FASTA) | |
| EAW70354 | (Get FASTA) | |
| P16410 | (Get FASTA) |
Promoters| RGD ID: | 6797028 | ||||||||||
| Promoter ID: | HG_KWN:36827 | ||||||||||
| Type: | Non-CpG | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | CD4+TCell | ||||||||||
| Transcripts: | NM_001037631, NM_005214, UC010FTY.1, UC010FTZ.1 | ||||||||||
| Position: |
|
| RGD ID: | 6797030 | ||||||||||
| Promoter ID: | HG_KWN:36828 | ||||||||||
| Type: | Non-CpG | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour | ||||||||||
| Transcripts: | OTTHUMT00000336357 | ||||||||||
| Position: |
|
External Database Links| Database | Acc Id | Source(s) |
| COSMIC | CTLA4 | COSMIC |
| Ensembl Genes | ENSG00000163599 | ENTREZGENE |
| Ensembl Protein | ENSP00000303939 | ENTREZGENE |
| Ensembl Transcript | ENST00000302823 | ENTREZGENE |
| Entrez Gene | 1493 | ENTREZGENE |
| Gene3D-CATH | Ig-like_fold | UniProtKB/Swiss-Prot |
| Germonline | ENSG00000163599 | |
| HGNC ID | 2505 | ENTREZGENE |
| HomoloGene Group ID | 3820 | ENTREZGENE |
| HPRD ID | 00474 | ENTREZGENE |
| InterPro | CTLA4 | UniProtKB/Swiss-Prot |
| Ig-like_fold | UniProtKB/Swiss-Prot | |
| Ig_V-set | UniProtKB/Swiss-Prot | |
| Ig_V-set_subgr | UniProtKB/Swiss-Prot | |
| IPI | IPI00027999 | UniProtKB/TrEMBL |
| IPI00028559 | UniProtKB/Swiss-Prot | |
| IPI00604432 | UniProtKB/Swiss-Prot | |
| IPI00945919 | UniProtKB/Swiss-Prot | |
| IPI01018238 | UniProtKB/Swiss-Prot | |
| KEGG Report | hsa:1493 | ENTREZGENE, UniProtKB/Swiss-Prot |
| OMIM | 123890 | OMIM |
| 601388 | OMIM | |
| 609755 | OMIM | |
| Pfam | V-set | UniProtKB/Swiss-Prot |
| PharmGKB | CTLA4 | RGD, PharmGKB |
| PRINTS | CTLANTIGEN4 | UniProtKB/Swiss-Prot |
| PROSITE | IG_LIKE; FALSE_NEG | UniProtKB/Swiss-Prot |
| SMART | IGv | UniProtKB/Swiss-Prot |
| UniGene | Hs.247824 | ENTREZGENE |
| UniProt | CTLA4_HUMAN | UniProtKB/Swiss-Prot |
| O95653_HUMAN | UniProtKB/TrEMBL |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2011-08-16 | CTLA4 | cytotoxic T-lymphocyte-associated protein 4 | CTLA4 | cytotoxic T-lymphocyte-associated protein 4 | Symbol and/or name change | 39860 | APPROVED |
| More on CTLA4 | |||
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Entrez Gene | ||
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Ensembl Gene | ||
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HGNC Report | ||
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NCBI Map Viewer | ||
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Vista | ||
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Vista + UCSC | ||
| RGD Object Information | |
| RGD ID: | 737465 |
| Created: | 2004-02-06 |
| Species: | Homo sapiens |
| Last Modified: | 2013-04-30 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




