Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | hepatocellular carcinoma | | ISO | GNAZ (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:28284560 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | hepatocellular carcinoma | | ISO | GNAZ (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:28284560 | |
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# | Reference Title | Reference Citation |
1. | Electronic Transfer of Homolog Data | MGD and Homologene mouse data transfer |
2. | MGDs mouse GO annotations | MGD data from the GO Consortium |
3. | MGD IEA | MGD IEA |
4. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
5. | PID Annotation Import Pipeline | Pipeline to import Pathway Interaction Database annotations from NCI into RGD |
6. | Mouse MP Annotation Import Pipeline | RGD automated import pipeline |
7. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
8. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
9. | Loss of signaling through the G protein, Gz, results in abnormal platelet activation and altered responses to psychoactive drugs. | Yang J, etal., Proc Natl Acad Sci U S A 2000 Aug 29;97(18):9984-9. |
PMID:1302014 | PMID:2508088 | PMID:3129724 | PMID:3923359 | PMID:8013366 | PMID:8858601 | PMID:8889548 | PMID:9593921 | PMID:9653653 | PMID:10349636 | PMID:10480904 | PMID:10869496 |
PMID:11042159 | PMID:11076861 | PMID:11217851 | PMID:11307826 | PMID:11685543 | PMID:11950062 | PMID:11970953 | PMID:12008073 | PMID:12198116 | PMID:12297509 | PMID:12414994 | PMID:12466851 |
PMID:12477932 | PMID:15033343 | PMID:15489334 | PMID:15931062 | PMID:16141072 | PMID:16141073 | PMID:16220329 | PMID:16602821 | PMID:16919471 | PMID:17684732 | PMID:18096703 | PMID:18287559 |
PMID:19284549 | PMID:19446022 | PMID:20152175 | PMID:20946953 | PMID:21220323 | PMID:21267068 | PMID:21873635 | PMID:22457354 | PMID:22794259 | PMID:24076664 | PMID:25535338 | PMID:27160897 |
PMID:28419211 | PMID:28634551 | PMID:28706196 | PMID:29088301 | PMID:29111324 | PMID:30068389 | PMID:30550785 | PMID:32581705 | PMID:33172888 | PMID:36808153 | PMID:38187761 |
Gnaz (Mus musculus - house mouse) |
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GNAZ (Homo sapiens - human) |
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Gnaz (Rattus norvegicus - Norway rat) |
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Gnaz (Chinchilla lanigera - long-tailed chinchilla) |
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GNAZ (Pan paniscus - bonobo/pygmy chimpanzee) |
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GNAZ (Canis lupus familiaris - dog) |
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Gnaz (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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GNAZ (Sus scrofa - pig) |
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GNAZ (Chlorocebus sabaeus - green monkey) |
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Gnaz (Heterocephalus glaber - naked mole-rat) |
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Variants in Gnaz
1457 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AI847979 |
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Gnaz |
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Gnaz |
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GNAZ |
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RefSeq Transcripts | NM_001358848 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001428502 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_010311 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006513235 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006513236 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC003059 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC142500 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF056972 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF056973 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK080716 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK133483 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK134710 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK139365 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC014702 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BF456902 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BG089218 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY128192 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY291477 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY718552 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CD776772 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466553 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CX734056 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
L17074 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000037813 ⟹ ENSMUSP00000036087 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000159991 ⟹ ENSMUSP00000124639 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000160421 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001358848 ⟹ NP_001345777 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_010311 ⟹ NP_034441 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006513235 ⟹ XP_006513298 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006513236 ⟹ XP_006513299 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001345777 | (Get FASTA) | NCBI Sequence Viewer |
NP_001415431 | (Get FASTA) | NCBI Sequence Viewer | |
NP_034441 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006513298 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006513299 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAC13568 | (Get FASTA) | NCBI Sequence Viewer |
AAC13569 | (Get FASTA) | NCBI Sequence Viewer | |
AAC37651 | (Get FASTA) | NCBI Sequence Viewer | |
AAH14702 | (Get FASTA) | NCBI Sequence Viewer | |
BAC37989 | (Get FASTA) | NCBI Sequence Viewer | |
BAE21680 | (Get FASTA) | NCBI Sequence Viewer | |
BAE22253 | (Get FASTA) | NCBI Sequence Viewer | |
EDL31937 | (Get FASTA) | NCBI Sequence Viewer | |
EDL31938 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000036087 | ||
ENSMUSP00000036087.5 | |||
ENSMUSP00000124639 | |||
ENSMUSP00000124639.2 | |||
GenBank Protein | O70443 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_034441 ⟸ NM_010311 |
- UniProtKB: | Q61637 (UniProtKB/Swiss-Prot), O70442 (UniProtKB/Swiss-Prot), Q91WM4 (UniProtKB/Swiss-Prot), O70443 (UniProtKB/Swiss-Prot), Q542R8 (UniProtKB/TrEMBL), Q3UYF9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006513298 ⟸ XM_006513235 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q61637 (UniProtKB/Swiss-Prot), O70442 (UniProtKB/Swiss-Prot), Q91WM4 (UniProtKB/Swiss-Prot), O70443 (UniProtKB/Swiss-Prot), Q542R8 (UniProtKB/TrEMBL), Q3UYF9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006513299 ⟸ XM_006513236 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q61637 (UniProtKB/Swiss-Prot), O70442 (UniProtKB/Swiss-Prot), Q91WM4 (UniProtKB/Swiss-Prot), O70443 (UniProtKB/Swiss-Prot), Q542R8 (UniProtKB/TrEMBL), Q3UYF9 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001345777 ⟸ NM_001358848 |
- UniProtKB: | Q61637 (UniProtKB/Swiss-Prot), O70443 (UniProtKB/Swiss-Prot), O70442 (UniProtKB/Swiss-Prot), Q91WM4 (UniProtKB/Swiss-Prot), Q542R8 (UniProtKB/TrEMBL), Q3UYF9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSMUSP00000124639 ⟸ ENSMUST00000159991 |
RefSeq Acc Id: | ENSMUSP00000036087 ⟸ ENSMUST00000037813 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-O70443-F1-model_v2 | AlphaFold | O70443 | 1-355 | view protein structure |
RGD ID: | 6819387 | ||||||||
Promoter ID: | MM_KWN:4530 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Brain, Kidney, Liver, Lung, Spleen | ||||||||
Transcripts: | OTTMUST00000082314, OTTMUST00000082316 | ||||||||
Position: |
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RGD ID: | 8672286 | ||||||||
Promoter ID: | EPDNEW_M14173 | ||||||||
Type: | initiation region | ||||||||
Name: | Gnaz_1 | ||||||||
Description: | Mus musculus guanine nucleotide binding protein, alpha z subunit, transcript variant 2, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:95780 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000040009 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Transcript | ENSMUST00000037813 | ENTREZGENE |
ENSMUST00000037813.5 | UniProtKB/Swiss-Prot | |
ENSMUST00000159991 | ENTREZGENE | |
ENSMUST00000159991.2 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 1.10.400.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
3.40.50.300 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | Gprotein_alpha_I | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Gprotein_alpha_su | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
GproteinA_insert | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:14687 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
MGD | MGI:95780 | ENTREZGENE |
NCBI Gene | 14687 | ENTREZGENE |
PANTHER | GUANINE NUCLEOTIDE-BINDING PROTEIN G(Z) SUBUNIT ALPHA | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR10218 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | G-alpha | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Gnaz | PhenoGen |
PRINTS | GPROTEINA | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
GPROTEINAI | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PROSITE | G_ALPHA | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SMART | G_alpha | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF47895 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF52540 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | GNAZ_MOUSE | UniProtKB/Swiss-Prot |
O70442 | ENTREZGENE | |
O70443 | ENTREZGENE | |
Q3UYF9 | ENTREZGENE, UniProtKB/TrEMBL | |
Q542R8 | ENTREZGENE, UniProtKB/TrEMBL | |
Q61637 | ENTREZGENE | |
Q91WM4 | ENTREZGENE | |
UniProt Secondary | O70442 | UniProtKB/Swiss-Prot |
Q61637 | UniProtKB/Swiss-Prot | |
Q91WM4 | UniProtKB/Swiss-Prot |