Large2 (LARGE xylosyl- and glucuronyltransferase 2)

Gene: Large2 (LARGE xylosyl- and glucuronyltransferase 2) Rattus norvegicus

Analyze

Symbol:

Large2

Name:

LARGE xylosyl- and glucuronyltransferase 2

RGD ID:

735214

Description:

Predicted to enable dystroglycan binding activity; glucuronosyltransferase activity; and xylosyltransferase activity. Predicted to be involved in protein O-linked mannosylation. Predicted to be located in intracellular membrane-bounded organelle. Predicted to be active in Golgi apparatus. Orthologous to human LARGE2 (LARGE xylosyl- and glucuronyltransferase 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

glycosyltransferase-like 1B; glycosyltransferase-like protein LARGE2; Gyltl1b; MGC72631; Unknown (protein for MGC:72631); xylosyl- and glucuronyltransferase LARGE2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI		GRCr8
mRatBN7.2	3	78,334,627 - 78,347,167 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	78,336,056 - 78,342,184 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	81,811,835 - 81,817,967 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	90,410,876 - 90,417,008 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	88,261,971 - 88,268,105 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	81,276,020 - 81,285,457 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	81,276,028 - 81,282,157 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	87,979,489 - 87,990,560 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	76,762,507 - 76,768,638 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	76,658,936 - 76,665,066 (-)	NCBI
Celera	3	77,538,049 - 77,544,180 (-)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

congenital disorder of glycosylation type IIc (ISO)

genetic disease (ISO)

infantile Refsum disease (ISO)

intellectual disability (ISO)

Zellweger syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-palmitoylglycerol (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

chrysene (ISO)

decabromodiphenyl ether (EXP)

dorsomorphin (ISO)

endosulfan (EXP)

folic acid (ISO)

fulvestrant (ISO)

gentamycin (EXP)

inulin (ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel atom (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

progesterone (ISO)

SB 431542 (ISO)

trichloroethene (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein O-linked mannosylation (IBA,IEA,ISO,ISS)

Cellular Component

Golgi apparatus (IBA,IEA)

Golgi membrane (IEA)

intracellular membrane-bounded organelle (ISO)

membrane (IEA)

Molecular Function

dystroglycan binding (ISO)

glucuronosyltransferase activity (IBA,IEA,ISO,ISS)

glycosyltransferase activity (ISO)

metal ion binding (IEA)

protein binding (ISO)

transferase activity (IEA)

UDP-glycosyltransferase activity (IEA)

xylosyltransferase activity (IBA,IEA,ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334	PMID:23125099	PMID:23135544	PMID:25138275

Genomics

Comparative Map Data

Large2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI		GRCr8
mRatBN7.2	3	78,334,627 - 78,347,167 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	78,336,056 - 78,342,184 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	81,811,835 - 81,817,967 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	90,410,876 - 90,417,008 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	88,261,971 - 88,268,105 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	81,276,020 - 81,285,457 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	81,276,028 - 81,282,157 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	87,979,489 - 87,990,560 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	76,762,507 - 76,768,638 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	76,658,936 - 76,665,066 (-)	NCBI
Celera	3	77,538,049 - 77,544,180 (-)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

LARGE2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	45,921,621 - 45,929,096 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	45,921,621 - 45,929,096 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	45,943,172 - 45,950,647 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	45,899,772 - 45,907,223 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	46,090,798 - 46,098,250 (+)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	45,650,018 - 45,657,284 (+)	NCBI		HuRef
CHM1_1	11	45,940,615 - 45,949,059 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	46,077,548 - 46,085,010 (+)	NCBI		T2T-CHM13v2.0

Large2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	92,195,391 - 92,201,437 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	92,195,391 - 92,205,214 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	92,365,046 - 92,371,086 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	92,365,046 - 92,374,869 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	92,205,203 - 92,211,193 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	92,165,891 - 92,171,850 (-)	NCBI		MGSCv36	mm8
Celera	2	93,758,175 - 93,764,164 (-)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	50.97	NCBI

Large2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	2,045,986 - 2,050,863 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	2,045,986 - 2,052,086 (-)	NCBI	ChiLan1.0	ChiLan1.0

LARGE2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	48,131,104 - 48,137,222 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	48,137,961 - 48,144,072 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	45,876,788 - 45,882,899 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	46,368,507 - 46,374,454 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	46,368,624 - 46,374,203 (+)	Ensembl	panpan1.1		panPan2

LARGE2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	43,497,134 - 43,503,177 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	43,497,484 - 43,502,619 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	42,225,385 - 42,231,185 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	44,153,316 - 44,159,124 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	44,153,447 - 44,158,590 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	43,637,574 - 43,643,378 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	43,190,737 - 43,195,957 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	43,922,802 - 43,928,608 (-)	NCBI		UU_Cfam_GSD_1.0

Large2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	20,982,067 - 20,987,714 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	3,093,857 - 3,099,311 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	3,093,719 - 3,099,311 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LARGE2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	16,545,448 - 16,550,888 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	16,545,436 - 16,550,922 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	17,962,525 - 17,968,338 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LARGE2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	19,411,127 - 19,424,016 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	19,413,123 - 19,419,104 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	116,690,272 - 116,697,931 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Large2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	2,583,978 - 2,589,107 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	2,583,981 - 2,589,257 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Large2
43 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	199
Count of miRNA genes:	140
Interacting mature miRNAs:	153
Transcripts:	ENSRNOT00000051258
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	10861912	89878372	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	29463235	118376539	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	30356773	98535386	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	104104347	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	38517803	83517803	Rat
1331777	Bw24	Body weight QTL 24	3.503		body mass (VT:0001259)	body weight (CMO:0000012)	3	39454637	89115240	Rat
1331795	Rf30	Renal function QTL 30	3.708		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	3	39454637	89115240	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	41874578	104104347	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	43827364	90905114	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	43827364	121056321	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	50437042	119183768	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	50437504	115638231	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	53184593	115665732	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	53184692	89878207	Rat
731180	Bp152	Blood pressure QTL 152		0.03	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	53781112	91609953	Rat
731180	Bp152	Blood pressure QTL 152		0.03	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	3	53781112	91609953	Rat
731180	Bp152	Blood pressure QTL 152		0.03	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	53781112	91609953	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	61017749	121056321	Rat
631200	Cm25	Cardiac mass QTL 25	4.8	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	3	61134348	89115068	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	64655305	115665732	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	64655305	115665732	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	70348525	121056321	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	70653097	121056321	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	73376539	118376539	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	78196190	146592722	Rat

Markers in Region

RH132772

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	78,336,104 - 78,336,284 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	81,276,077 - 81,276,256	NCBI	Rnor6.0
Rnor_5.0	3	87,979,546 - 87,979,725	UniSTS	Rnor5.0
RGSC_v3.4	3	76,762,559 - 76,762,738	UniSTS	RGSC3.4
Celera	3	77,538,101 - 77,538,280	UniSTS
RH 3.4 Map	3	708.39	UniSTS
Cytogenetic Map	3	q24	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	1		2	2		2			6	28	20	2
Low	2	20	52	39	19	39	1	1	67	7	21	9	1
Below cutoff		22	3				7	9	1				7

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_199107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC129036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC061762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000051258 ⟹ ENSRNOP00000041797

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	78,336,056 - 78,342,184 (-)	Ensembl
Rnor_6.0 Ensembl	3	81,276,028 - 81,282,157 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000098647 ⟹ ENSRNOP00000089432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	78,336,056 - 78,342,184 (-)	Ensembl

RefSeq Acc Id:

NM_199107 ⟹ NP_954538

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,797,674 (-)	NCBI
mRatBN7.2	3	78,336,053 - 78,342,184 (-)	NCBI
Rnor_6.0	3	81,276,025 - 81,282,157 (-)	NCBI
Rnor_5.0	3	87,979,489 - 87,990,560 (-)	NCBI
RGSC_v3.4	3	76,762,507 - 76,768,638 (-)	RGD
Celera	3	77,538,049 - 77,544,180 (-)	RGD

Sequence:

show sequence

GGAACAGGGCCTTCCCGGAGCCACTGGAGCAGGGTCCGAGATGGAGCCCGCAGCCCGAGGTCGT
GTCCCGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCACTGGGGGCCG
CACTGCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCCGGAGTATGG
ACTAGGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCCGCAACCGCTCCACCTCCAGC
CTGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGTGGCCATCGTGTGTGCGGGATACA
ACTCCAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTCTACAGGAAAAATCCGCTGCA
CCTCCACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATG
GTACCAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAAGCCCCTGGTTTCCTGGATTC
CCAACAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTACTTCCCAGCGTCCTGCCTCT
CAGCCTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCTCCTCTGACATTATGGAGCTC
TGGGCACTCTTTGGTCATTTTTCTGACAAGCAGGTGGTCGGTCTTGTGGAGAACCAGAGCGACT
GGTACCTGGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGCCTTGGGCAGGGGATTTAACAC
AGGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTGGCTGGGAGCAGATGTGGAAGCTG
ACGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTTGGCTGACCAGGACATCTTCAATG
CCGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCCTGTGTCTGGAACGTGCAGCTGTC
AGACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTGACCTCAAAGTGATCCACTGGAAT
TCACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATTCTTCCGTGATCTACACTTGACCT
TCCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTTGGTTGCCCCAACCAGTTCCCTCC
TGGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATGAGGAAGAGCCCTGCTTTGAGTTC
CGCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTTTCTGTCTCACCAGCCGCCACCTC
CTCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATGGACCGGCTGCAGATGCTGGAAGC
CCTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGAGGCTCAA
CAGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGCAAGGAAGGATGTGGCCTATCATG
TAGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTCCGAAATGTGGCCTTGGCCCAGGC
TCTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTACCTGCCTACTCCCTCTATGACTAC
CTCAGGGCCTCTATTGAGCAACTGGCGCTGGGCAGGCGGCAGAGGAAGGCTGCTTTGGTAGTGC
CTGCATTTGAGACCCTGCACTACCGTTTCAGCTTCCCAAACTCTAAGGCAGAGTTGTTGACCTT
ACTGGATGCTGGCTCTCTCCACACCTTTAGGTACCACGAGTGGCCACAGGGTCATGCATCCACA
GACTATACCCGCTGGCGGGAAGCCCAGGCACCATACCGAGTGCAGTGGTCAGCTGACTATGAGC
CTTACGTGGTGGTACCCCGTGACTGTCCCCGCTATGACCCTCGCTTTGTGGGCTTTGGCTGGAA
CAAGGTGGCCCATATCATAGAGCTGGATGCTCAGGAATATGAATTCCTGGTACTTCCTGAGGCC
TTCTCTATCCACTTGCCCCATGCCCCAAGTCTGGACATCTCCCGCTTCCGCTCCAGCCCCACCT
ACCGCGACTGCCTCCAGGCCCTCAAGGAGGAGTTCCACCAGGACTTGTCTAGGCGCTATGGGTC
TGCAGCCCTCAAATACCTCACTGCCCTGCAGCAGTCCCGAAGCCGGGCCTGAGCTTGCCGGGAC
ACATACATACACTGGAGAAACTGGGGACCCTGGTGGGTGCCTACCCTTATTGCTTTCTAAATTA
TTTAAAGTTTTTGTCAGAAGGGCTAGAGTGGAGCATCTGTGGGGTTCCTGGTTCCTTCTCCTGC
TGTTCCACACTGGGGTCCAGCCCTCCTTTGCCTCAGCTGGTTTGGGGCTAGTTCTCCTAATCTC
TTATATAATAAAATTTTTTAACTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006234562 ⟹ XP_006234624

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI
mRatBN7.2	3	78,334,627 - 78,347,167 (-)	NCBI
Rnor_6.0	3	81,276,020 - 81,285,457 (-)	NCBI
Rnor_5.0	3	87,979,489 - 87,990,560 (-)	NCBI

Sequence:

show sequence

ACACACCAGAAGAGGGCATCAGATCCCATTACAGATAGTTGTGAGCCACCATGTGGTTGCTGGG
AATTGAACACGGGACCTCTGGAAAACCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCT
CCTCTTTCCCTTTCTTTAATCAGTGTGGAGCCAAGCTCCCGCTGTTGCCAACCACACTCATGCC
AGTGTCAGCAAAGTTTCACGGAAAGGTGTGGTAAGCCTCAGAAGAGTCTGTGGTATGGGCACTG
TGAAGTCTTCCTTCACCCTGTCCTGAGGCCTCACATGCTCCTGGCCCTACTGGTAATTGTGATG
GTTCCATCTTCATTGTCGGCTTGGTAGGTTTAGAATCACTATAGAAACATCTCTGAGTGTGTCC
ATGGATGTGTTTCCAGAAACACTGAATCCAGAGGCCTCAGTCTGGATATTTGTACCCTAAGAGT
CCGGAGCTGAATGAAGGAGAAAGCAAGCTGTGCACCTGCATTGTCTTTCTCTGTTCCCTGACTG
TGTATACAATGTGGCCAGCTGTCTGTGGCTTTTGAAATCACGGCCTCCCTGCTATGATGCATTC
ATTAAATCCTTAAACTGTGAACCAAAATAAATACCCACTTAAGCTTACTCTGCCAGGTGTTTCT
TTTGTCACATCGTTAAGAAAAGTAAGTCATACATCAACCTTGTCTGATTGGTGGGAACTCTCCC
ACAGATGAAGCCCAGGGAGGCTCAACTGCTTAGCCTAGGTAGCACAGCAAGACTCTGACCAAAA
AGGCTCATGGCAATGTCTTCTAGCTCAGAAGGCATGACGAGGCAAGCTTGGCTTAGGAACTTGC
CTCAGGAAGTCATTGAGTTTACTACCTTTGGGGCCACTCCTCCAGCTCTCTGCCCAGCTGAAGT
GAAGGTGTGTGTGTTTGTACTTGTGTGTACATGTCGGCAAGTTCTTAGGTGCAAGATTTCATCA
GATGGTCTTTTGTTCTGGGGAGGAAAGATAGGCCCCGGAGGACAGAATGGTACATCACCTCCTC
TCCATATCCCAACAGTGAAGGGCCCTTCTCTCCAGGAGAGGGGACTGGGCCAGCCAGGCTGGCA
GCAACAGACCTGCCTGAATTTTTTCCTCTAGATCTGGAGGCTGATTAGGCTTCAGAGATAAAGA
GCAGAGGTGTGCATAGACTTGGCAGGCCGGAAGGCCCCTCCCTTTTGAATTCCTGCCTGGACCT
GGCAGCAAGGCTGGGCTGCAAAGACTTCTGGATAAATTGCGTTGGATCCTCACACCTTCAGTGT
ATCCCAAACCTCCGGGAGAAGAAGGAGAAGAAAGACCAGTTGGACAGACACAGATGAGGACAGC
AGAAGCCTAGGGAGGGTGCTGGACAGGTCCAAGGTCACAAAGGTCCGAGATGGAGCCCGCAGCC
CGAGGTCGTGTCCCGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCAC
TGGGGGCCGCACTGCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCC
GGAGTGTGAGCGCCGTAGCTGGGCAGGGGAAGGGGGGACCCTGTGTGACCGCTGCCTGCTCACG
CCACGTGTCTTTTCAGATGGACTAGGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCC
GCAACCGCTCCACCTCCAGCCTGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGTGGC
CATCGTGTGTGCGGGATACAACTCCAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTC
TACAGGAAAAATCCGCTGCACCTCCACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGA
CACTCTTCCGAACATGGATGGTACCAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAA
GCCCCTGGTTTCCTGGATTCCCAACAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTA
CTTCCCAGCGTCCTGCCTCTCAGCCTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCT
CCTCTGACATTATGGAGCTCTGGGCACTCTTTGGTCATTTTTCTGACAAGCAGGTGGTCGGTCT
TGTGGAGAACCAGAGCGACTGGTACCTGGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGCC
TTGGGCAGGGGATTTAACACAGGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTGGCT
GGGAGCAGATGTGGAAGCTGACGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTTGGC
TGACCAGGACATCTTCAATGCCGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCCTGT
GTCTGGAACGTGCAGTTGTCAGACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTGACC
TCAAAGTGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATTCTT
CCGTGATCTACACTTGACCTTCCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTTGGT
TGCCCCAACCAGTTCCCTCCTGGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATGAGG
AAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTTTCT
GTCTCACCAGCCGCCACCTCCTCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATGGAC
CGGCTGCAGATGCTGGAAGCCCTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGTACC
TGACAGACGCAGAGGCTCAACAGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGCAAG
GAAGGATGTGGCCTATCATGTAGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTCCGA
AATGTGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTACCTG
CCTACTCCCTCTATGACTACCTCAGGGCCTCTATTGAGCAACTGGCGCTGGGCAGGCGGCAGAG
GAAGGCTGCTTTGGTAGTGCCTGCATTTGAGACCCTGCACTACCGTTTCAGCTTCCCAAACTCT
AAGGCAGAGTTGTTGACCTTACTGGATGCTGGCTCTCTCCACACCTTTAGGTACCACGAGTGGC
CACAGGGTCATGCATCCACAGACTATACCCGCTGGCGGGAAGCCCAGGCACCATACCGAGTGCA
GTGGTCAGCTGACTATGAGCCTTACGTGGTGGTACCCCGTGACTGTCCCCGCTATGACCCTCGC
TTTGTGGGCTTTGGCTGGAACAAGGTGGCCCATATCATAGAGCTGGATGCTCAGGAATATGAAT
TCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCATGCCCCAAGTCTGGACATCTCCCG
CTTCCGCTCCAGCCCCACCTACCGCGACTGCCTCCAGGCCCTCAAGGAGGAGTTCCACCAGGAC
TTGTCTAGGCGCTATGGGTCTGCAGCCCTCAAATACCTCACTGCCCTGCAGCAGTCCCGAAGCC
GGGCCTGAGCTTGCCGGGACACATACATACACTGGAGAAACTGGGGACCCTGGTGGGTGCCTAC
CCTTATTGCTTTCTAAATTATTTAAAGTTTTTGTCAGAAGGGCTAGAGTGGAGCATCTGTGGGG
TTCCTGGTTCCTTCTCCTGCTGTTCCACACTGGGGTCCAGCCCTCCTTTGCCTCAGCTGGTTTG
GGGCTAGTTCTCCTAATTCTCTTATATAATAAAATTTTTTAACTTTTTAAATCTTA

hide sequence

RefSeq Acc Id:

XM_006234564 ⟹ XP_006234626

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI
mRatBN7.2	3	78,334,627 - 78,343,953 (-)	NCBI
Rnor_6.0	3	81,276,020 - 81,282,217 (-)	NCBI
Rnor_5.0	3	87,979,489 - 87,990,560 (-)	NCBI

Sequence:

show sequence

GTTGGGGGCGGGGCTAGCTCGGGATTCTGTCCGGGTCCTGGTTGCCTGGCGGTGGCGGGAGGAA
CAGGGCCTTCCCGGAGCCACTGGAGCAGGGTCCGAGATGGAGCCCGCAGCCCGAGGTCGTGTCC
CGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCACTGGGGGCCGCACT
GCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCCGGAGTATGGACTA
GGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCCGCAACCGCTCCACCTCCAGCCTGC
AGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCCATCGTGTGTGCGGGATACAA
CTCCAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTCTACAGGAAAAATCCGCTGCAC
CTCCACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATGG
TACCAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAAGCCCCTGGTTTCCTGGATTCC
CAACAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTACTTCCCAGCGTCCTGCCTCTC
AGCCTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCTCCTCTGACATTATGGAGCTCT
GGGCACTCTTTGGTCATTTTTCTGACAAGCAGGTGGTCGGTCTTGTGGAGAACCAGAGCGACTG
GTACCTGGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGCCTTGGGCAGGGGATTTAACACA
GGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTGGCTGGGAGCAGATGTGGAAGCTGA
CGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTTGGCTGACCAGGACATCTTCAATGC
CGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCCTGTGTCTGGAACGTGCAGTTGTCA
GACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTGACCTCAAAGTGATCCACTGGAATT
CACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATTCTTCCGTGATCTACACTTGACCTT
CCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTTGGTTGCCCCAACCAGTTCCCTCCT
GGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATGAGGAAGAGCCCTGCTTTGAGTTCC
GCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTTTCTGTCTCACCAGCCGCCACCTCC
TCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATGGACCGGCTGCAGATGCTGGAAGCC
CTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGAGGCTCAAC
AGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGCAAGGAAGGATGTGGCCTATCATGT
AGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTCCGAAATGTGGCCTTGGCCCAGGCT
CTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTACCTGCCTACTCCCTCTATGACTACC
TCAGGGCCTCTATTGAGCAACTGGCGCTGGGCAGGCGGCAGAGGAAGGCTGCTTTGGTAGTGCC
TGCATTTGAGACCCTGCACTACCGTTTCAGCTTCCCAAACTCTAAGGCAGAGTTGTTGACCTTA
CTGGATGCTGGCTCTCTCCACACCTTTAGGTACCACGAGTGGCCACAGGGTCATGCATCCACAG
ACTATACCCGCTGGCGGGAAGCCCAGGCACCATACCGAGTGCAGTGGTCAGCTGACTATGAGCC
TTACGTGGTGGTACCCCGTGACTGTCCCCGCTATGACCCTCGCTTTGTGGGCTTTGGCTGGAAC
AAGGTGGCCCATATCATAGAGCTGGATGCTCAGGAATATGAATTCCTGGTACTTCCTGAGGCCT
TCTCTATCCACTTGCCCCATGCCCCAAGTCTGGACATCTCCCGCTTCCGCTCCAGCCCCACCTA
CCGCGACTGCCTCCAGGCCCTCAAGGAGGAGTTCCACCAGGACTTGTCTAGGCGCTATGGGTCT
GCAGCCCTCAAATACCTCACTGCCCTGCAGCAGTCCCGAAGCCGGGCCTGAGCTTGCCGGGACA
CATACATACACTGGAGAAACTGGGGACCCTGGTGGGTGCCTACCCTTATTGCTTTCTAAATTAT
TTAAAGTTTTTGTCAGAAGGGCTAGAGTGGAGCATCTGTGGGGTTCCTGGTTCCTTCTCCTGCT
GTTCCACACTGGGGTCCAGCCCTCCTTTGCCTCAGCTGGTTTGGGGCTAGTTCTCCTAATTCTC
TTATATAATAAAATTTTTTAACTTTTTAAATCTTA

hide sequence

RefSeq Acc Id:

XM_006234566 ⟹ XP_006234628

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI
mRatBN7.2	3	78,334,627 - 78,343,954 (-)	NCBI
Rnor_6.0	3	81,276,020 - 81,282,217 (-)	NCBI
Rnor_5.0	3	87,979,489 - 87,990,560 (-)	NCBI

Sequence:

show sequence

GTTGGGGGCGGGGCTAGCTCGGGATTCTGTCCGGGTCCTGGTTGCCTGGCGGTGGCGGGAGGAA
CAGGGCCTTCCCGGAGCCACTGGAGCAGGGTCCGAGATGGAGCCCGCAGCCCGAGGTCGTGTCC
CGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCACTGGGGGCCGCACT
GCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCCGGAGTATGGACTA
GGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCCGCAACCGCTCCACCTCCAGCCTGC
AGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCCATCGTGTGTGCGGGATACAA
CTCCAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTCTACAGGAAAAATCCGCTGCAC
CTCCACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATGG
TACCAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAAGCCCCTGGTTTCCTGGATTCC
CAACAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTACTTCCCAGCGTCCTGCCTCTC
AGCCTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCTCCTCTGACATTATGGAGCTCT
GGGCACTCTTTGGTCATTTTTCTGACAAGCAGGTGGTCGGTCTTGTGGAGAACCAGAGCGACTG
GTACCTGGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGCCTTGGGCAGGGGATTTAACACA
GGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTGGCTGGGAGCAGATGTGGAAGCTGA
CGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTTGGCTGACCAGGACATCTTCAATGC
CGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCCTGTGTCTGGAACGTGCAGTTGTCA
GACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTGACCTCAAAGTGATCCACTGGAATT
CACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATTCTTCCGTGATCTACACTTGACCTT
CCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTTGGTTGCCCCAACCAGTTCCCTCCT
GGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATGAGGAAGAGCCCTGCTTTGAGTTCC
GCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTTTCTGTCTCACCAGCCGCCACCTCC
TCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATGGACCGGCTGCAGATGCTGGAAGCC
CTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGTACCTGACAGACGCAGAGGCTCAAC
AGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGCAAGGAAGGATGTGGCCTATCATGT
AGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTCCGAAATGTGGCCTTGGCCCAGGCT
CTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTACCTGCCTACTCCCTCTATGACTACC
TCAGCTTCCCAAACTCTAAGGCAGAGTTGTTGACCTTACTGGATGCTGGCTCTCTCCACACCTT
TAGGTACCACGAGTGGCCACAGGGTCATGCATCCACAGACTATACCCGCTGGCGGGAAGCCCAG
GCACCATACCGAGTGCAGTGGTCAGCTGACTATGAGCCTTACGTGGTGGTACCCCGTGACTGTC
CCCGCTATGACCCTCGCTTTGTGGGCTTTGGCTGGAACAAGGTGGCCCATATCATAGAGCTGGA
TGCTCAGGAATATGAATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCATGCCCCA
AGTCTGGACATCTCCCGCTTCCGCTCCAGCCCCACCTACCGCGACTGCCTCCAGGCCCTCAAGG
AGGAGTTCCACCAGGACTTGTCTAGGCGCTATGGGTCTGCAGCCCTCAAATACCTCACTGCCCT
GCAGCAGTCCCGAAGCCGGGCCTGAGCTTGCCGGGACACATACATACACTGGAGAAACTGGGGA
CCCTGGTGGGTGCCTACCCTTATTGCTTTCTAAATTATTTAAAGTTTTTGTCAGAAGGGCTAGA
GTGGAGCATCTGTGGGGTTCCTGGTTCCTTCTCCTGCTGTTCCACACTGGGGTCCAGCCCTCCT
TTGCCTCAGCTGGTTTGGGGCTAGTTCTCCTAATTCTCTTATATAATAAAATTTTTTAACTTTT
TAAATCTTA

hide sequence

RefSeq Acc Id:

XM_008762024 ⟹ XP_008760246

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI
mRatBN7.2	3	78,334,627 - 78,343,956 (-)	NCBI
Rnor_6.0	3	81,276,020 - 81,282,218 (-)	NCBI

Sequence:

show sequence

GGTTGGGGGCGGGGCTAGCTCGGGATTCTGTCCGGGTCCTGGTTGCCTGGCGGTGGCGGGAGGA
ACAGGGCCTTCCCGGAGCCACTGGAGCAGGGTCCGAGATGGAGCCCGCAGCCCGAGGTCGTGTC
CCGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCACTGGGGGCCGCAC
TGCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCCGGAGTGTGAGCG
CCGTAGCTGGGCAGGGGAAGGGGGGACCCTGTGTGACCGCTGCCTGCTCACGCCACGTGTCTTT
TCAGATGGACTAGGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCCGCAACCGCTCCA
CCTCCAGCCTGCAGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGTGGCCATCGTGTGTGC
GGGATACAACTCCAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTCTACAGGAAAAAT
CCGCTGCACCTCCACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAA
CATGGATGGTACCAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAAGCCCCTGGTTTC
CTGGATTCCCAACAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTACTTCCCAGCGTC
CTGCCTCTCAGCCTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCTCCTCTGACATTA
TGGAGCTCTGGGCACTCTTTGGTCATTTTTCTGACAAGCAGGTGGTCGGTCTTGTGGAGAACCA
GAGCGACTGGTACCTGGGCAACCTCTGGAAGAACCATAGGCCCTGGCCTGCCTTGGGCAGGGGA
TTTAACACAGGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTGGCTGGGAGCAGATGT
GGAAGCTGACGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTTGGCTGACCAGGACAT
CTTCAATGCCGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCCTGTGTCTGGAACGTG
CAGTTGTCAGACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTGACCTCAAAGTGATCC
ACTGGAATTCACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATTCTTCCGTGATCTACA
CTTGACCTTCCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTTGGTTGCCCCAACCAG
TTCCCTCCTGGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATGAGGAAGAGCCCTGCT
TTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTTTCTGTCTCACCAGCC
GCCACCTCCTCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATGGACCGGCTGCAGATG
CTGGAAGCCCTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGTACCTGACAGACGCAG
AGGCTCAACAGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGCAAGGAAGGATGTGGC
CTATCATGTAGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTCCGAAATGTGGCCTTG
GCCCAGGCTCTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTACCTGCCTACTCCCTCT
ATGACTACCTCAGGGCCTCTATTGAGCAACTGGCGCTGGGCAGGCGGCAGAGGAAGGCTGCTTT
GGTAGTGCCTGCATTTGAGACCCTGCACTACCGTTTCAGCTTCCCAAACTCTAAGGCAGAGTTG
TTGACCTTACTGGATGCTGGCTCTCTCCACACCTTTAGGTACCACGAGTGGCCACAGGGTCATG
CATCCACAGACTATACCCGCTGGCGGGAAGCCCAGGCACCATACCGAGTGCAGTGGTCAGCTGA
CTATGAGCCTTACGTGGTGGTACCCCGTGACTGTCCCCGCTATGACCCTCGCTTTGTGGGCTTT
GGCTGGAACAAGGTGGCCCATATCATAGAGCTGGATGCTCAGGAATATGAATTCCTGGTACTTC
CTGAGGCCTTCTCTATCCACTTGCCCCATGCCCCAAGTCTGGACATCTCCCGCTTCCGCTCCAG
CCCCACCTACCGCGACTGCCTCCAGGCCCTCAAGGAGGAGTTCCACCAGGACTTGTCTAGGCGC
TATGGGTCTGCAGCCCTCAAATACCTCACTGCCCTGCAGCAGTCCCGAAGCCGGGCCTGAGCTT
GCCGGGACACATACATACACTGGAGAAACTGGGGACCCTGGTGGGTGCCTACCCTTATTGCTTT
CTAAATTATTTAAAGTTTTTGTCAGAAGGGCTAGAGTGGAGCATCTGTGGGGTTCCTGGTTCCT
TCTCCTGCTGTTCCACACTGGGGTCCAGCCCTCCTTTGCCTCAGCTGGTTTGGGGCTAGTTCTC
CTAATTCTCTTATATAATAAAATTTTTTAACTTTTTAAATCTTA

hide sequence

RefSeq Acc Id:

XM_017591718 ⟹ XP_017447207

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI
mRatBN7.2	3	78,334,627 - 78,343,954 (-)	NCBI
Rnor_6.0	3	81,276,020 - 81,282,218 (-)	NCBI

Sequence:

show sequence

GGTTGGGGGCGGGGCTAGCTCGGGATTCTGTCCGGGTCCTGGTTGCCTGGCGGTGGCGGGAGGA
ACAGGGCCTTCCCGGAGCCACTGGAGCAGGGTCCGAGATGGAGCCCGCAGCCCGAGGTCGTGTC
CCGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCACTGGGGGCCGCAC
TGCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCCGGAGTATGGACT
AGGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCCGCAACCGCTCCACCTCCAGCCTG
CAGCTTCTACTGCCACCCAAGTGCGAGGTAATGTTGCATGTGGCCATCGTGTGTGCGGGATACA
ACTCCAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTCTACAGGAAAAATCCGCTGCA
CCTCCACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATG
GTACCAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAAGCCCCTGGTTTCCTGGATTC
CCAACAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTACTTCCCAGCGTCCTGCCTCT
CAGCCTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCTCCTCTGACATTATGGAGCTC
TGGGCACTCTTTGGTCATTTTTCTGGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTG
GCTGGGAGCAGATGTGGAAGCTGACGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTT
GGCTGACCAGGACATCTTCAATGCCGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCC
TGTGTCTGGAACGTGCAGTTGTCAGACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTG
ACCTCAAAGTGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATT
CTTCCGTGATCTACACTTGACCTTCCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTT
GGTTGCCCCAACCAGTTCCCTCCTGGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATG
AGGAAGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTT
TCTGTCTCACCAGCCGCCACCTCCTCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATG
GACCGGCTGCAGATGCTGGAAGCCCTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGT
ACCTGACAGACGCAGAGGCTCAACAGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGC
AAGGAAGGATGTGGCCTATCATGTAGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTC
CGAAATGTGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTAC
CTGCCTACTCCCTCTATGACTACCTCAGGGCCTCTATTGAGCAACTGGCGCTGGGCAGGCGGCA
GAGGAAGGCTGCTTTGGTAGTGCCTGCATTTGAGACCCTGCACTACCGTTTCAGCTTCCCAAAC
TCTAAGGCAGAGTTGTTGACCTTACTGGATGCTGGCTCTCTCCACACCTTTAGGTACCACGAGT
GGCCACAGGGTCATGCATCCACAGACTATACCCGCTGGCGGGAAGCCCAGGCACCATACCGAGT
GCAGTGGTCAGCTGACTATGAGCCTTACGTGGTGGTACCCCGTGACTGTCCCCGCTATGACCCT
CGCTTTGTGGGCTTTGGCTGGAACAAGGTGGCCCATATCATAGAGCTGGATGCTCAGGAATATG
AATTCCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCATGCCCCAAGTCTGGACATCTC
CCGCTTCCGCTCCAGCCCCACCTACCGCGACTGCCTCCAGGCCCTCAAGGAGGAGTTCCACCAG
GACTTGTCTAGGCGCTATGGGTCTGCAGCCCTCAAATACCTCACTGCCCTGCAGCAGTCCCGAA
GCCGGGCCTGAGCTTGCCGGGACACATACATACACTGGAGAAACTGGGGACCCTGGTGGGTGCC
TACCCTTATTGCTTTCTAAATTATTTAAAGTTTTTGTCAGAAGGGCTAGAGTGGAGCATCTGTG
GGGTTCCTGGTTCCTTCTCCTGCTGTTCCACACTGGGGTCCAGCCCTCCTTTGCCTCAGCTGGT
TTGGGGCTAGTTCTCCTAATTCTCTTATATAATAAAATTTTTTAACTTTTTAAATCTTA

hide sequence

RefSeq Acc Id:

XM_017591719 ⟹ XP_017447208

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI
mRatBN7.2	3	78,334,627 - 78,343,953 (-)	NCBI
Rnor_6.0	3	81,276,020 - 81,282,217 (-)	NCBI

Sequence:

show sequence

GTTGGGGGCGGGGCTAGCTCGGGATTCTGTCCGGGTCCTGGTTGCCTGGCGGTGGCGGGAGGAA
CAGGGCCTTCCCGGAGCCACTGGAGCAGGGTCCGAGATGGAGCCCGCAGCCCGAGGTCGTGTCC
CGCCCTGACTCCCACAGACAGCCATGCTGCCTCGAGGGCGCCCCCGGGCACTGGGGGCCGCACT
GCTGTTGTTGCTGCTGCTAGTGGTTGGCTTCTTCCTATTCGGCCGGGACCCGGAGTATGGACTA
GGCACAACCGCCACCCTCGATGGAGACCCGTACGGGAGCCGCAACCGCTCCACCTCCAGCCTGC
AGCTTCTACTGCCACCCAAGTGCGAGATGTTGCATGTGGCCATCGTGTGTGCGGGATACAACTC
CAGCCGAGAGATCATCACCCTAATGAAGTCCGTGCTATTCTACAGGAAAAATCCGCTGCACCTC
CACCTGATAACCGATGCCGTAGCCAGAAACATCCTGGAGACACTCTTCCGAACATGGATGGTAC
CAGCTGTGGTGGTCAGCTTCTATGATGCTGAAGAGCTCAAGCCCCTGGTTTCCTGGATTCCCAA
CAAGCACTACTCTGGCCTCTATGGGCTCATGAAGCTAGTACTTCCCAGCGTCCTGCCTCTCAGC
CTGGCCCGAGTCATTGTCCTGGACACCGATGTCACTTTCTCCTCTGACATTATGGAGCTCTGGG
CACTCTTTGGTCATTTTTCTGGTGTGATCCTGCTTTGGCTGGACAGATTACAGCAGATTGGCTG
GGAGCAGATGTGGAAGCTGACGGCCAAACGGGAGCTGCTTACTTTGACTGCCACTTCCTTGGCT
GACCAGGACATCTTCAATGCCGTCATCAAGGAGCATCCCGAGCTGGTGCATCCCCTGCCCTGTG
TCTGGAACGTGCAGTTGTCAGACCACACTCTGGCTGAGCGCTGCTACTTGGAAGCAGCTGACCT
CAAAGTGATCCACTGGAATTCACCAAAGAAGCTTCGAGTGAAGAACAAGCATGCAGAATTCTTC
CGTGATCTACACTTGACCTTCCTGGGGTTTGACGGGAAGCTACTGTGTAGAGAGCTCTTTGGTT
GCCCCAACCAGTTCCCTCCTGGGGTTGAGCAGTTGCAACAGGCCCTAGCACAGCTGGATGAGGA
AGAGCCCTGCTTTGAGTTCCGCCAACAGCAGCTCACTGTGCACCGTGTACACATCACCTTTCTG
TCTCACCAGCCGCCACCTCCTCGGCCTCACGATGTCACCTTGGTGGCCCAGCTCTCTATGGACC
GGCTGCAGATGCTGGAAGCCCTGTGCAGGCACTGGCGGGGTCCCATGAGCCTGGCCTTGTACCT
GACAGACGCAGAGGCTCAACAGTTCCTGCGTTTCGTGGAGACGTCACCAGTACTCTCTGCAAGG
AAGGATGTGGCCTATCATGTAGTGTACCGGGACGGCCCCCTCTACCCAGTCAACCAGCTCCGAA
ATGTGGCCTTGGCCCAGGCTCTCACACCCTACGTCTTCCTCAGTGATATTGACTTCTTACCTGC
CTACTCCCTCTATGACTACCTCAGGGCCTCTATTGAGCAACTGGCGCTGGGCAGGCGGCAGAGG
AAGGCTGCTTTGGTAGTGCCTGCATTTGAGACCCTGCACTACCGTTTCAGCTTCCCAAACTCTA
AGGCAGAGTTGTTGACCTTACTGGATGCTGGCTCTCTCCACACCTTTAGGTACCACGAGTGGCC
ACAGGGTCATGCATCCACAGACTATACCCGCTGGCGGGAAGCCCAGGCACCATACCGAGTGCAG
TGGTCAGCTGACTATGAGCCTTACGTGGTGGTACCCCGTGACTGTCCCCGCTATGACCCTCGCT
TTGTGGGCTTTGGCTGGAACAAGGTGGCCCATATCATAGAGCTGGATGCTCAGGAATATGAATT
CCTGGTACTTCCTGAGGCCTTCTCTATCCACTTGCCCCATGCCCCAAGTCTGGACATCTCCCGC
TTCCGCTCCAGCCCCACCTACCGCGACTGCCTCCAGGCCCTCAAGGAGGAGTTCCACCAGGACT
TGTCTAGGCGCTATGGGTCTGCAGCCCTCAAATACCTCACTGCCCTGCAGCAGTCCCGAAGCCG
GGCCTGAGCTTGCCGGGACACATACATACACTGGAGAAACTGGGGACCCTGGTGGGTGCCTACC
CTTATTGCTTTCTAAATTATTTAAAGTTTTTGTCAGAAGGGCTAGAGTGGAGCATCTGTGGGGT
TCCTGGTTCCTTCTCCTGCTGTTCCACACTGGGGTCCAGCCCTCCTTTGCCTCAGCTGGTTTGG
GGCTAGTTCTCCTAATTCTCTTATATAATAAAATTTTTTAACTTTTTAAATCTTA

hide sequence

RefSeq Acc Id:

XM_063283669 ⟹ XP_063139739

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI

RefSeq Acc Id:

XM_063283670 ⟹ XP_063139740

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI

RefSeq Acc Id:

XM_063283671 ⟹ XP_063139741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,791,543 - 98,800,251 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_954538	(Get FASTA)	NCBI Sequence Viewer
	XP_006234624	(Get FASTA)	NCBI Sequence Viewer
	XP_006234626	(Get FASTA)	NCBI Sequence Viewer
	XP_006234628	(Get FASTA)	NCBI Sequence Viewer
	XP_008760246	(Get FASTA)	NCBI Sequence Viewer
	XP_017447207	(Get FASTA)	NCBI Sequence Viewer
	XP_017447208	(Get FASTA)	NCBI Sequence Viewer
	XP_063139739	(Get FASTA)	NCBI Sequence Viewer
	XP_063139740	(Get FASTA)	NCBI Sequence Viewer
	XP_063139741	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH61762	(Get FASTA)	NCBI Sequence Viewer
	EDL79561	(Get FASTA)	NCBI Sequence Viewer
	EDL79562	(Get FASTA)	NCBI Sequence Viewer
	EDL79563	(Get FASTA)	NCBI Sequence Viewer
	EDL79564	(Get FASTA)	NCBI Sequence Viewer
	EDL79565	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000041797
	ENSRNOP00000041797.3
	ENSRNOP00000089432
	ENSRNOP00000089432.1
GenBank Protein	Q6P7A1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_954538 ⟸ NM_199107

- UniProtKB:

Q6P7A1 (UniProtKB/Swiss-Prot), A6HNG2 (UniProtKB/TrEMBL), A6HNG3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLPRGRPRALGAALLLLLLLVVGFFLFGRDPEYGLGTTATLDGDPYGSRNRSTSSLQLLLPPKC
EMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLITDAVARNILETLFRTWMVPAVVVSFY
DAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARVIVLDTDVTFSSDIMELWALFGHFSD
KQVVGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLWLDRLQQIGWEQMWKLTAKRELLTL
TATSLADQDIFNAVIKEHPELVHPLPCVWNVQLSDHTLAERCYLEAADLKVIHWNSPKKLRVKN
KHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPPGVEQLQQALAQLDEEEPCFEFRQQQLTVHR
VHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEALCRHWRGPMSLALYLTDAEAQQFLRFVETS
PVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQLA
LGRRQRKAALVVPAFETLHYRFSFPNSKAELLTLLDAGSLHTFRYHEWPQGHASTDYTRWREAQ
APYRVQWSADYEPYVVVPRDCPRYDPRFVGFGWNKVAHIIELDAQEYEFLVLPEAFSIHLPHAP
SLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGSAALKYLTALQQSRSRA

hide sequence

RefSeq Acc Id:	XP_006234624 ⟸ XM_006234562
- Peptide Label:	isoform X1
- UniProtKB:	A6HNG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPRGRPRALGAALLLLLLLVVGFFLFGRDPECERRSWAGEGGTLCDRCLLTPRVFSDGLGTTA TLDGDPYGSRNRSTSSLQLLLPPKCEMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLIT DAVARNILETLFRTWMVPAVVVSFYDAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARV IVLDTDVTFSSDIMELWALFGHFSDKQVVGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILL WLDRLQQIGWEQMWKLTAKRELLTLTATSLADQDIFNAVIKEHPELVHPLPCVWNVQLSDHTLA ERCYLEAADLKVIHWNSPKKLRVKNKHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPPGVEQL QQALAQLDEEEPCFEFRQQQLTVHRVHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEALCRHW RGPMSLALYLTDAEAQQFLRFVETSPVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQALTPYV FLSDIDFLPAYSLYDYLRASIEQLALGRRQRKAALVVPAFETLHYRFSFPNSKAELLTLLDAGS LHTFRYHEWPQGHASTDYTRWREAQAPYRVQWSADYEPYVVVPRDCPRYDPRFVGFGWNKVAHI IELDAQEYEFLVLPEAFSIHLPHAPSLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGSAALKY LTALQQSRSRA hide sequence

RefSeq Acc Id:	XP_006234628 ⟸ XM_006234566
- Peptide Label:	isoform X3
- UniProtKB:	A6HNG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPRGRPRALGAALLLLLLLVVGFFLFGRDPEYGLGTTATLDGDPYGSRNRSTSSLQLLLPPKC EVMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLITDAVARNILETLFRTWMVPAVVVSF YDAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARVIVLDTDVTFSSDIMELWALFGHFS DKQVVGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLWLDRLQQIGWEQMWKLTAKRELLT LTATSLADQDIFNAVIKEHPELVHPLPCVWNVQLSDHTLAERCYLEAADLKVIHWNSPKKLRVK NKHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPPGVEQLQQALAQLDEEEPCFEFRQQQLTVH RVHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEALCRHWRGPMSLALYLTDAEAQQFLRFVET SPVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLSFPNSKA ELLTLLDAGSLHTFRYHEWPQGHASTDYTRWREAQAPYRVQWSADYEPYVVVPRDCPRYDPRFV GFGWNKVAHIIELDAQEYEFLVLPEAFSIHLPHAPSLDISRFRSSPTYRDCLQALKEEFHQDLS RRYGSAALKYLTALQQSRSRA hide sequence

RefSeq Acc Id:	XP_006234626 ⟸ XM_006234564
- Peptide Label:	isoform X2
- UniProtKB:	A0A8L2QLT7 (UniProtKB/TrEMBL), A6HNG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPRGRPRALGAALLLLLLLVVGFFLFGRDPEYGLGTTATLDGDPYGSRNRSTSSLQLLLPPKC EVMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLITDAVARNILETLFRTWMVPAVVVSF YDAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARVIVLDTDVTFSSDIMELWALFGHFS DKQVVGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLWLDRLQQIGWEQMWKLTAKRELLT LTATSLADQDIFNAVIKEHPELVHPLPCVWNVQLSDHTLAERCYLEAADLKVIHWNSPKKLRVK NKHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPPGVEQLQQALAQLDEEEPCFEFRQQQLTVH RVHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEALCRHWRGPMSLALYLTDAEAQQFLRFVET SPVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQL ALGRRQRKAALVVPAFETLHYRFSFPNSKAELLTLLDAGSLHTFRYHEWPQGHASTDYTRWREA QAPYRVQWSADYEPYVVVPRDCPRYDPRFVGFGWNKVAHIIELDAQEYEFLVLPEAFSIHLPHA PSLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGSAALKYLTALQQSRSRA hide sequence

RefSeq Acc Id:	XP_008760246 ⟸ XM_008762024
- Peptide Label:	isoform X1
- UniProtKB:	A6HNG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPRGRPRALGAALLLLLLLVVGFFLFGRDPECERRSWAGEGGTLCDRCLLTPRVFSDGLGTTA TLDGDPYGSRNRSTSSLQLLLPPKCEMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLIT DAVARNILETLFRTWMVPAVVVSFYDAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARV IVLDTDVTFSSDIMELWALFGHFSDKQVVGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILL WLDRLQQIGWEQMWKLTAKRELLTLTATSLADQDIFNAVIKEHPELVHPLPCVWNVQLSDHTLA ERCYLEAADLKVIHWNSPKKLRVKNKHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPPGVEQL QQALAQLDEEEPCFEFRQQQLTVHRVHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEALCRHW RGPMSLALYLTDAEAQQFLRFVETSPVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQALTPYV FLSDIDFLPAYSLYDYLRASIEQLALGRRQRKAALVVPAFETLHYRFSFPNSKAELLTLLDAGS LHTFRYHEWPQGHASTDYTRWREAQAPYRVQWSADYEPYVVVPRDCPRYDPRFVGFGWNKVAHI IELDAQEYEFLVLPEAFSIHLPHAPSLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGSAALKY LTALQQSRSRA hide sequence

RefSeq Acc Id:	XP_017447207 ⟸ XM_017591718
- Peptide Label:	isoform X5
- UniProtKB:	A6HNG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPRGRPRALGAALLLLLLLVVGFFLFGRDPEYGLGTTATLDGDPYGSRNRSTSSLQLLLPPKC EVMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLITDAVARNILETLFRTWMVPAVVVSF YDAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARVIVLDTDVTFSSDIMELWALFGHFS GVILLWLDRLQQIGWEQMWKLTAKRELLTLTATSLADQDIFNAVIKEHPELVHPLPCVWNVQLS DHTLAERCYLEAADLKVIHWNSPKKLRVKNKHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPP GVEQLQQALAQLDEEEPCFEFRQQQLTVHRVHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEA LCRHWRGPMSLALYLTDAEAQQFLRFVETSPVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQA LTPYVFLSDIDFLPAYSLYDYLRASIEQLALGRRQRKAALVVPAFETLHYRFSFPNSKAELLTL LDAGSLHTFRYHEWPQGHASTDYTRWREAQAPYRVQWSADYEPYVVVPRDCPRYDPRFVGFGWN KVAHIIELDAQEYEFLVLPEAFSIHLPHAPSLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGS AALKYLTALQQSRSRA hide sequence

RefSeq Acc Id:	XP_017447208 ⟸ XM_017591719
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6ACM6 (UniProtKB/TrEMBL), A6HNG3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPRGRPRALGAALLLLLLLVVGFFLFGRDPEYGLGTTATLDGDPYGSRNRSTSSLQLLLPPKC EMLHVAIVCAGYNSSREIITLMKSVLFYRKNPLHLHLITDAVARNILETLFRTWMVPAVVVSFY DAEELKPLVSWIPNKHYSGLYGLMKLVLPSVLPLSLARVIVLDTDVTFSSDIMELWALFGHFSG VILLWLDRLQQIGWEQMWKLTAKRELLTLTATSLADQDIFNAVIKEHPELVHPLPCVWNVQLSD HTLAERCYLEAADLKVIHWNSPKKLRVKNKHAEFFRDLHLTFLGFDGKLLCRELFGCPNQFPPG VEQLQQALAQLDEEEPCFEFRQQQLTVHRVHITFLSHQPPPPRPHDVTLVAQLSMDRLQMLEAL CRHWRGPMSLALYLTDAEAQQFLRFVETSPVLSARKDVAYHVVYRDGPLYPVNQLRNVALAQAL TPYVFLSDIDFLPAYSLYDYLRASIEQLALGRRQRKAALVVPAFETLHYRFSFPNSKAELLTLL DAGSLHTFRYHEWPQGHASTDYTRWREAQAPYRVQWSADYEPYVVVPRDCPRYDPRFVGFGWNK VAHIIELDAQEYEFLVLPEAFSIHLPHAPSLDISRFRSSPTYRDCLQALKEEFHQDLSRRYGSA ALKYLTALQQSRSRA hide sequence

RefSeq Acc Id:

ENSRNOP00000041797 ⟸ ENSRNOT00000051258

RefSeq Acc Id:

ENSRNOP00000089432 ⟸ ENSRNOT00000098647

RefSeq Acc Id:	XP_063139739 ⟸ XM_063283669
- Peptide Label:	isoform X2
- UniProtKB:	A0A8L2QLT7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139740 ⟸ XM_063283670
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063139741 ⟸ XM_063283671
- Peptide Label:	isoform X7

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6P7A1-F1-model_v2	AlphaFold	Q6P7A1	1-690	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:735214	AgrOrtholog
BioCyc Gene	G2FUF-48702	BioCyc
Ensembl Genes	ENSRNOG00000006353	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000051258.4	UniProtKB/TrEMBL
	ENSRNOT00000098647.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:5621056	IMAGE-MGC_LOAD
InterPro	Glyco_trans_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:311202	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:72631	IMAGE-MGC_LOAD
NCBI Gene	311202	ENTREZGENE
PANTHER	GLYCOSYLTRANSFERASE-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LARGE XYLOSYL- AND GLUCURONYLTRANSFERASE 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Glyco_transf_49	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Glyco_transf_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Large2	PhenoGen
RatGTEx	ENSRNOG00000006353	RatGTEx
Superfamily-SCOP	SSF53448	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I6ACM6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QLT7	ENTREZGENE, UniProtKB/TrEMBL
	A6HNG2	ENTREZGENE, UniProtKB/TrEMBL
	A6HNG3	ENTREZGENE, UniProtKB/TrEMBL
	LARG2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-06-08	Large2	LARGE xylosyl- and glucuronyltransferase 2	Gyltl1b	glycosyltransferase-like 1B	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-07-08	Gyltl1b	glycosyltransferase-like 1B	MGC72631	Unknown (protein for MGC:72631)	Symbol and Name updated	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar