CACNG5 (calcium voltage-gated channel auxiliary subunit gamma 5) - Rat Genome Database

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Gene: CACNG5 (calcium voltage-gated channel auxiliary subunit gamma 5) Homo sapiens
Analyze
Symbol: CACNG5
Name: calcium voltage-gated channel auxiliary subunit gamma 5
RGD ID: 734378
HGNC Page HGNC:1409
Description: Predicted to enable channel regulator activity and voltage-gated calcium channel activity. Predicted to be involved in several processes, including neurotransmitter receptor transport, postsynaptic endosome to lysosome; positive regulation of glutamatergic synaptic transmission; and postsynaptic neurotransmitter receptor diffusion trapping. Is active in glutamatergic synapse.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: calcium channel, voltage-dependent, gamma subunit 5; MGC126656; MGC126682; neuronal voltage-gated calcium channel gamma-5 subunit; TARP gamma-5; transmembrane AMPAR regulatory protein gamma-5; voltage-dependent calcium channel gamma-5 subunit
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381766,835,117 - 66,894,751 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1766,835,117 - 66,894,751 (+)EnsemblGRCh38hg38GRCh38
GRCh371764,831,235 - 64,890,868 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361762,303,913 - 62,311,819 (+)NCBINCBI36Build 36hg18NCBI36
Build 341762,303,912 - 62,311,561NCBI
Celera1761,446,119 - 61,454,026 (+)NCBICelera
Cytogenetic Map17q24.2NCBI
HuRef1760,262,608 - 60,270,613 (+)NCBIHuRef
CHM1_11764,937,383 - 64,945,388 (+)NCBICHM1_1
T2T-CHM13v2.01767,710,939 - 67,770,522 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Identification of three novel Ca(2+) channel gamma subunit genes reveals molecular diversification by tandem and chromosome duplication. Burgess DL, etal., Genome Res 1999 Dec;9(12):1204-13.
2. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11170751   PMID:11738816   PMID:11927536   PMID:12477932   PMID:15489334   PMID:17652770   PMID:18817736   PMID:21057379   PMID:21873635   PMID:27102562   PMID:28514442   PMID:33961781  


Genomics

Comparative Map Data
CACNG5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381766,835,117 - 66,894,751 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1766,835,117 - 66,894,751 (+)EnsemblGRCh38hg38GRCh38
GRCh371764,831,235 - 64,890,868 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361762,303,913 - 62,311,819 (+)NCBINCBI36Build 36hg18NCBI36
Build 341762,303,912 - 62,311,561NCBI
Celera1761,446,119 - 61,454,026 (+)NCBICelera
Cytogenetic Map17q24.2NCBI
HuRef1760,262,608 - 60,270,613 (+)NCBIHuRef
CHM1_11764,937,383 - 64,945,388 (+)NCBICHM1_1
T2T-CHM13v2.01767,710,939 - 67,770,522 (+)NCBIT2T-CHM13v2.0
Cacng5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911107,765,431 - 107,805,881 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11107,765,431 - 107,805,881 (-)EnsemblGRCm39 Ensembl
GRCm3811107,874,604 - 107,915,055 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11107,874,605 - 107,915,055 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711107,735,919 - 107,772,676 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611107,690,695 - 107,727,452 (-)NCBIMGSCv36mm8
Celera11119,610,080 - 119,648,160 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1170.44NCBI
Cacng5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81093,327,142 - 93,369,244 (-)NCBIGRCr8
mRatBN7.21092,827,441 - 92,869,632 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1092,829,196 - 92,869,614 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1097,888,205 - 97,895,250 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01097,351,240 - 97,358,289 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01092,760,001 - 92,766,806 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01096,122,240 - 96,166,606 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1096,123,397 - 96,131,880 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01095,853,195 - 95,894,702 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41097,300,594 - 97,309,023 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11097,314,963 - 97,323,393 (-)NCBI
Celera1091,494,396 - 91,501,201 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Cacng5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554786,110,146 - 6,155,034 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554786,110,440 - 6,152,677 (+)NCBIChiLan1.0ChiLan1.0
CACNG5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21982,864,777 - 82,924,482 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11787,684,073 - 87,743,760 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01760,771,501 - 60,831,190 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11765,979,469 - 66,031,723 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1765,979,469 - 66,031,723 (+)Ensemblpanpan1.1panPan2
CACNG5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1913,575,902 - 13,587,818 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl913,578,805 - 13,615,233 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha914,470,211 - 14,509,341 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0915,238,846 - 15,278,084 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl915,238,906 - 15,278,099 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1914,186,116 - 14,225,232 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0913,308,814 - 13,347,997 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0913,310,392 - 13,349,413 (+)NCBIUU_Cfam_GSD_1.0
Cacng5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560212,984,674 - 13,025,336 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365416,168,904 - 6,182,787 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365416,168,186 - 6,209,924 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CACNG5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1213,288,544 - 13,328,017 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11213,288,510 - 13,328,811 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21213,660,097 - 13,696,935 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CACNG5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11654,561,040 - 54,612,026 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1654,561,317 - 54,569,097 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607725,599,437 - 25,654,351 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cacng5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248701,517,746 - 1,569,379 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248701,518,813 - 1,569,395 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CACNG5
17 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3 copy number gain See cases [RCV000050957] Chr17:36449220..68170214 [GRCh38]
Chr17:48563237..65936105 [GRCh37]
Chr17:45918236..63677950 [NCBI36]
Chr17:17q21.33-24.2		 pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3		 pathogenic
NM_145811.2(CACNG5):c.189C>T (p.Phe63=) single nucleotide variant Malignant melanoma [RCV000063282] Chr17:66877521 [GRCh38]
Chr17:64873639 [GRCh37]
Chr17:62304101 [NCBI36]
Chr17:17q24.2		 not provided
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3 copy number gain See cases [RCV000137437] Chr17:36449220..75053130 [GRCh38]
Chr17:57595736..73049225 [GRCh37]
Chr17:54950518..70560820 [NCBI36]
Chr17:17q23.1-25.1		 pathogenic
GRCh38/hg38 17q24.1-24.2(chr17:64634771-67686888)x1 copy number loss See cases [RCV000140815] Chr17:64634771..67686888 [GRCh38]
Chr17:62649313..65683004 [GRCh37]
Chr17:60061351..63113466 [NCBI36]
Chr17:17q24.1-24.2		 pathogenic
GRCh37/hg19 17q24.2-25.3(chr17:64241326-81041938)x3 copy number gain See cases [RCV000447577] Chr17:64241326..81041938 [GRCh37]
Chr17:17q24.2-25.3		 pathogenic
GRCh37/hg19 17q24.1-24.2(chr17:63764889-64931712)x3 copy number gain See cases [RCV000448965] Chr17:63764889..64931712 [GRCh37]
Chr17:17q24.1-24.2		 uncertain significance
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3 copy number gain See cases [RCV000447823] Chr17:42580684..81085615 [GRCh37]
Chr17:17q21.31-25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
NM_145811.3(CACNG5):c.193G>A (p.Ala65Thr) single nucleotide variant not provided [RCV000513044] Chr17:66877525 [GRCh38]
Chr17:64873643 [GRCh37]
Chr17:17q24.2		 uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q24.1-25.3(chr17:63689671-81041938)x3 copy number gain not provided [RCV000683952] Chr17:63689671..81041938 [GRCh37]
Chr17:17q24.1-25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q24.1-25.2(chr17:64159738-74891024)x3 copy number gain not provided [RCV000762750] Chr17:64159738..74891024 [GRCh37]
Chr17:17q24.1-25.2		 likely pathogenic
GRCh37/hg19 17q23.2-24.2(chr17:59597348-64886364)x3 copy number gain not provided [RCV000752158] Chr17:59597348..64886364 [GRCh37]
Chr17:17q23.2-24.2		 pathogenic
GRCh37/hg19 17q22-24.2(chr17:57357088-66306668) copy number gain not provided [RCV000767764] Chr17:57357088..66306668 [GRCh37]
Chr17:17q22-24.2		 pathogenic
GRCh37/hg19 17q24.1-25.3(chr17:62778720-81041938)x3 copy number gain not provided [RCV000849900] Chr17:62778720..81041938 [GRCh37]
Chr17:17q24.1-25.3		 pathogenic
GRCh37/hg19 17q23.1-24.2(chr17:57869604-67078443)x3 copy number gain not provided [RCV000845965] Chr17:57869604..67078443 [GRCh37]
Chr17:17q23.1-24.2		 pathogenic
NM_145811.3(CACNG5):c.206G>C (p.Arg69Pro) single nucleotide variant Inborn genetic diseases [RCV003239348] Chr17:66878981 [GRCh38]
Chr17:64875099 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.57T>C (p.Cys19=) single nucleotide variant not provided [RCV000892681] Chr17:66877389 [GRCh38]
Chr17:64873507 [GRCh37]
Chr17:17q24.2		 benign
GRCh37/hg19 17q24.1-24.2(chr17:63764889-64931712) copy number gain not specified [RCV002052602] Chr17:63764889..64931712 [GRCh37]
Chr17:17q24.1-24.2		 uncertain significance
NM_145811.3(CACNG5):c.533C>T (p.Ser178Leu) single nucleotide variant Inborn genetic diseases [RCV002837100] Chr17:66884624 [GRCh38]
Chr17:64880741 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.808A>G (p.Met270Val) single nucleotide variant Inborn genetic diseases [RCV002883129] Chr17:66885220 [GRCh38]
Chr17:64881337 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.181G>T (p.Val61Phe) single nucleotide variant Inborn genetic diseases [RCV002997608] Chr17:66877513 [GRCh38]
Chr17:64873631 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.603G>T (p.Met201Ile) single nucleotide variant Inborn genetic diseases [RCV002925152] Chr17:66885015 [GRCh38]
Chr17:64881132 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.370C>T (p.Arg124Cys) single nucleotide variant Inborn genetic diseases [RCV002739680] Chr17:66880643 [GRCh38]
Chr17:64876760 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.100C>A (p.Leu34Met) single nucleotide variant Inborn genetic diseases [RCV002874969] Chr17:66877432 [GRCh38]
Chr17:64873550 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.676G>A (p.Asp226Asn) single nucleotide variant Inborn genetic diseases [RCV002697362] Chr17:66885088 [GRCh38]
Chr17:64881205 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.292C>T (p.Arg98Cys) single nucleotide variant Inborn genetic diseases [RCV002670173] Chr17:66880565 [GRCh38]
Chr17:64876682 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.206G>A (p.Arg69Gln) single nucleotide variant Inborn genetic diseases [RCV002964318] Chr17:66878981 [GRCh38]
Chr17:64875099 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.91G>A (p.Asp31Asn) single nucleotide variant Inborn genetic diseases [RCV003189048] Chr17:66877423 [GRCh38]
Chr17:64873541 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.653G>A (p.Arg218His) single nucleotide variant Inborn genetic diseases [RCV003306981] Chr17:66885065 [GRCh38]
Chr17:64881182 [GRCh37]
Chr17:17q24.2		 uncertain significance
NM_145811.3(CACNG5):c.752C>G (p.Ser251Cys) single nucleotide variant Inborn genetic diseases [RCV003343503] Chr17:66885164 [GRCh38]
Chr17:64881281 [GRCh37]
Chr17:17q24.2		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:896
Count of miRNA genes:464
Interacting mature miRNAs:505
Transcripts:ENST00000169565, ENST00000307139, ENST00000533854
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
CACNG5_3025  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371764,880,546 - 64,881,133UniSTSGRCh37
Build 361762,311,008 - 62,311,595RGDNCBI36
Celera1761,453,215 - 61,453,802RGD
HuRef1760,269,764 - 60,270,351UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage pharyngeal arch
High
Medium 1 6 2 12 1 1
Low 1 31 4 55 3 185 12 943 26 45 38 1 1
Below cutoff 411 147 397 58 269 47 255 134 1951 122 504 236 12 71 169

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000307139   ⟹   ENSP00000303092
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1766,877,273 - 66,885,278 (+)Ensembl
RefSeq Acc Id: ENST00000533854   ⟹   ENSP00000436836
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1766,835,117 - 66,894,751 (+)Ensembl
RefSeq Acc Id: ENST00000673855   ⟹   ENSP00000501267
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1766,877,269 - 66,894,742 (+)Ensembl
RefSeq Acc Id: NM_001371476   ⟹   NP_001358405
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381766,835,117 - 66,894,751 (+)NCBI
T2T-CHM13v2.01767,710,939 - 67,770,522 (+)NCBI
Sequence:
RefSeq Acc Id: NM_145811   ⟹   NP_665810
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381766,835,117 - 66,894,751 (+)NCBI
GRCh371764,831,235 - 64,881,941 (+)NCBI
Build 361762,303,913 - 62,311,819 (+)NCBI Archive
Celera1761,446,119 - 61,454,026 (+)RGD
HuRef1760,262,608 - 60,270,613 (+)ENTREZGENE
CHM1_11764,937,383 - 64,945,388 (+)NCBI
T2T-CHM13v2.01767,710,939 - 67,770,522 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_665810   ⟸   NM_145811
- Peptide Label: isoform 1
- UniProtKB: Q8WXS7 (UniProtKB/Swiss-Prot),   Q547R3 (UniProtKB/Swiss-Prot),   A8K2A6 (UniProtKB/Swiss-Prot),   Q9UHM3 (UniProtKB/Swiss-Prot),   Q9UF02 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001358405   ⟸   NM_001371476
- Peptide Label: isoform 2
- UniProtKB: A0A669KBF6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000501267   ⟸   ENST00000673855
RefSeq Acc Id: ENSP00000303092   ⟸   ENST00000307139
RefSeq Acc Id: ENSP00000436836   ⟸   ENST00000533854

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9UF02-F1-model_v2 AlphaFold Q9UF02 1-275 view protein structure

Promoters
RGD ID:7236073
Promoter ID:EPDNEW_H23783
Type:initiation region
Name:CACNG5_1
Description:calcium voltage-gated channel auxiliary subunit gamma 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381766,877,297 - 66,877,357EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1409 AgrOrtholog
COSMIC CACNG5 COSMIC
Ensembl Genes ENSG00000075429 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000307139.4 UniProtKB/Swiss-Prot
  ENST00000533854 ENTREZGENE
  ENST00000533854.6 UniProtKB/Swiss-Prot
  ENST00000673855 ENTREZGENE
  ENST00000673855.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.140.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000075429 GTEx
HGNC ID HGNC:1409 ENTREZGENE
Human Proteome Map CACNG5 Human Proteome Map
InterPro PMP22/EMP/MP20/Claudin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VDCC_g5su UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VDCC_gsu UniProtKB/Swiss-Prot
KEGG Report hsa:27091 UniProtKB/Swiss-Prot
NCBI Gene 27091 ENTREZGENE
OMIM 606405 OMIM
PANTHER PTHR12107:SF4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Claudin_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA26019 PharmGKB
PRINTS VDCCGAMMA UniProtKB/Swiss-Prot
  VDCCGAMMA5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A669KBF6 ENTREZGENE, UniProtKB/TrEMBL
  A8K2A6 ENTREZGENE
  CCG5_HUMAN UniProtKB/Swiss-Prot
  Q547R3 ENTREZGENE
  Q8WXS7 ENTREZGENE
  Q9UF02 ENTREZGENE
  Q9UHM3 ENTREZGENE
UniProt Secondary A8K2A6 UniProtKB/Swiss-Prot
  Q547R3 UniProtKB/Swiss-Prot
  Q8WXS7 UniProtKB/Swiss-Prot
  Q9UHM3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-10 CACNG5  calcium voltage-gated channel auxiliary subunit gamma 5    calcium channel, voltage-dependent, gamma subunit 5  Symbol and/or name change 5135510 APPROVED