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Gene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 2-methylcholine | affects expression | EXP | | 6480464 | beta-methylcholine affects the expression of SNAP25 mRNA | CTD | PMID:21179406 | all-trans-retinoic acid | increases expression | EXP | | 6480464 | Tretinoin results in increased expression of SNAP25 mRNA | CTD | PMID:21934132 | ammonium chloride | affects expression | ISO | RGD:3728 | 6480464 | Ammonium Chloride affects the expression of SNAP25 mRNA | CTD | PMID:16483693 | ammonium chloride | decreases expression | ISO | RGD:3728 | 6480464 | Ammonium Chloride results in decreased expression of SNAP25 protein | CTD | PMID:16483693 | arsenite(3-) | decreases degradation | ISO | RGD:3728 | 6480464 | arsenite results in decreased degradation of SNAP25 protein | CTD | PMID:18597805 | benzo[a]pyrene | increases expression | ISO | RGD:3728 | 6480464 | Benzo(a)pyrene results in increased expression of SNAP25 mRNA | CTD | PMID:21839799 | bicalutamide | increases expression | EXP | | 6480464 | bicalutamide results in increased expression of SNAP25 mRNA | CTD | PMID:15790403 | bisphenol A | decreases expression | ISO | RGD:3728 | 6480464 | bisphenol A results in decreased expression of SNAP25 mRNA | CTD | PMID:22946080 | C60 fullerene | decreases expression | ISO | RGD:3728 | 6480464 | fullerene C60 results in decreased expression of SNAP25 mRNA | CTD | PMID:19167457 | clozapine | increases expression | ISO | RGD:3728 | 6480464 | Clozapine results in increased expression of SNAP25 mRNA | CTD | PMID:15860345 | clozapine | affects response to substance | EXP | | 6480464 | SNAP25 gene SNP affects the susceptibility to Clozapine | CTD | PMID:15823421 | cobalt dichloride | decreases expression | EXP | | 6480464 | cobaltous chloride results in decreased expression of SNAP25 mRNA | CTD | PMID:19376846 | crocidolite asbestos | decreases expression | EXP | | 6480464 | Asbestos, Crocidolite results in decreased expression of SNAP25 mRNA | CTD | PMID:18687144 | cypermethrin | decreases expression | ISO | RGD:3728 | 6480464 | cypermethrin results in decreased expression of SNAP25 protein | CTD | PMID:21561882 | cypermethrin | multiple interactions | ISO | RGD:3728 | 6480464 | Minocycline inhibits the reaction [cypermethrin results in decreased expression of SNAP25 protein] | CTD | PMID:21561882 | dichlorine | multiple interactions | ISO | RGD:3728 | 6480464 | [Ozone co-treated with Chlorine] results in increased expression of SNAP25 mRNA | CTD | PMID:18636392 | elemental selenium | multiple interactions | EXP | | 6480464 | [Selenium co-treated with Vitamin E] results in decreased expression of SNAP25 mRNA | CTD | PMID:19244175 | elemental selenium | decreases expression | EXP | | 6480464 | Selenium results in decreased expression of SNAP25 mRNA | CTD | PMID:19244175 | ethanol | decreases expression | ISO | RGD:3728 | 6480464 | Ethanol results in decreased expression of SNAP25 mRNA | CTD | PMID:20655511 | ethanol | multiple interactions | ISO | RGD:3728 | 6480464 | N-methyl-N-(6-methoxy-1-phenyl-1,2,3,4-tetrahydronaphthalen-2-ylmethyl)aminomethylcarboxylic acid inhibits the reaction [Ethanol results in decreased expression of SNAP25 mRNA] | CTD | PMID:20655511 | haloperidol | affects response to substance | EXP | | 6480464 | SNAP25 gene SNP affects the susceptibility to Haloperidol | CTD | PMID:15823421 | haloperidol | affects expression | ISO | RGD:3728 | 6480464 | Haloperidol affects the expression of SNAP25 mRNA | CTD | PMID:15860345 | heroin | decreases expression | EXP | | 6480464 | Heroin results in decreased expression of SNAP25 mRNA | CTD | PMID:16710320 | hydrogen peroxide | affects expression | EXP | | 6480464 | Hydrogen Peroxide affects the expression of SNAP25 protein | CTD | PMID:21179406 | methylamine | multiple interactions | ISO | RGD:734152 | 6480464 | methylamine inhibits the reaction [Botulinum Toxins, Type A results in increased cleavage of SNAP25 protein] | CTD | PMID:11181932 | methylphenidate | affects response to substance | EXP | | 6480464 | SNAP25 gene polymorphism affects the susceptibility to Methylphenidate | CTD | PMID:17023870 | minocycline | multiple interactions | ISO | RGD:3728 | 6480464 | Minocycline inhibits the reaction [cypermethrin results in decreased expression of SNAP25 protein] | CTD | PMID:21561882 | olanzapine | affects response to substance | EXP | | 6480464 | SNAP25 gene SNP affects the susceptibility to olanzapine | CTD | PMID:15823421 | ozone | multiple interactions | ISO | RGD:3728 | 6480464 | [Ozone co-treated with Chlorine] results in increased expression of SNAP25 mRNA | CTD | PMID:18636392 | phenobarbital | decreases expression | ISO | RGD:3728 | 6480464 | Phenobarbital results in decreased expression of SNAP25 mRNA | CTD | PMID:19162173 | risperidone | affects response to substance | EXP | | 6480464 | SNAP25 gene SNP affects the susceptibility to Risperidone | CTD | PMID:15823421 | selenium atom | multiple interactions | EXP | | 6480464 | [Selenium co-treated with Vitamin E] results in decreased expression of SNAP25 mRNA | CTD | PMID:19244175 | selenium atom | decreases expression | EXP | | 6480464 | Selenium results in decreased expression of SNAP25 mRNA | CTD | PMID:19244175 | valproic acid | affects expression | ISO | RGD:734152 | 6480464 | Valproic Acid affects the expression of SNAP25 mRNA | CTD | PMID:17963808 | valproic acid | increases expression | ISO | RGD:734152 | 6480464 | Valproic Acid results in increased expression of SNAP25 mRNA | CTD | PMID:21427059 | zinc atom | multiple interactions | ISO | RGD:734152 | 6480464 | Zinc affects the reaction [Botulinum Toxins, Type A results in increased cleavage of SNAP25 protein] | CTD | PMID:11181932 | zinc atom | multiple interactions | EXP | | 6480464 | [PCI 5002 co-treated with Zinc] results in decreased expression of SNAP25 mRNA | CTD | PMID:18593933 | zinc(0) | multiple interactions | ISO | RGD:734152 | 6480464 | Zinc affects the reaction [Botulinum Toxins, Type A results in increased cleavage of SNAP25 protein] | CTD | PMID:11181932 | zinc(0) | multiple interactions | EXP | | 6480464 | [PCI 5002 co-treated with Zinc] results in decreased expression of SNAP25 mRNA | CTD | PMID:18593933 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Molecular Pathway Annotations| External Database Links | |
| KEGG Pathway | SNARE interactions in vesicular transport |
| Synaptic vesicle cycle | |
| Pathway Interaction Database | Effects of Botulinum toxin (PID:200187) |
Disease Annotations
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Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| KEGG Pathway | SNARE interactions in vesicular transport |
| Synaptic vesicle cycle | |
| Pathway Interaction Database | Effects of Botulinum toxin (PID:200187) |
References - curated| 1. |
Greber-Platzer S, etal., Neurosci Lett. 2003 Jan 16;336(2):77-80. |
| 2. |
MacDonald PE and Wheeler MB, Diabetologia. 2003 Aug;46(8):1046-62. Epub 2003 Jun 27. |
| 3. |
RGD automated import pipeline for gene-chemical interactions |
References - uncurated| PubMed | 10085240 |
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RGD Disease Portals| SNAP25 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| SNAP25 (Homo sapiens) |
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| Snap25 (Mus musculus) |
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| Snap25 (Rattus norvegicus) |
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Position Markers| STS-AA017039 |
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| WI-18780 |
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| 1788 |
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| RH47511 |
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| D20S763 |
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| WI-14216 |
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| RH28686 |
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| SHGC-68771 |
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| RH122608 |
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| WI-19889 |
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| SHGC-12843 |
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| Z94685 |
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| MARC_11717-11718:1029180244:1 |
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| STS-AA017039 |
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QTLs in Region (Human Genome Assembly GRCh37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NG_029626 | (Get FASTA) | Search GEO for Microarray Profiles |
| NM_003081 | (Get FASTA) | Search GEO for Microarray Profiles | |
| NM_130811 | (Get FASTA) | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | ABBA01053932 | (Get FASTA) | Search GEO for Microarray Profiles |
| AK026732 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK090857 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK094560 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK098347 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK098767 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK223617 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK289647 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK314359 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AL023913 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AL354824 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01011709 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01011710 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC010647 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BI552777 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BI602062 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BI604120 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BT019684 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BX647443 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH471133 | (Get FASTA) | Search GEO for Microarray Profiles | |
| D21267 | (Get FASTA) | Search GEO for Microarray Profiles | |
| L19760 | (Get FASTA) | Search GEO for Microarray Profiles | |
| L19761 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_003081 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_003072 | |||||||||||||||||||||||||
| Peptide Label: | isoform SNAP25A | |||||||||||||||||||||||||
| Position: |
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| RefSeq Acc Id: | NM_130811 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_570824 | |||||||||||||||||||||||||
| Peptide Label: | isoform SNAP25B | |||||||||||||||||||||||||
| Position: |
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Protein Sequences| Protein RefSeqs | NP_003072 | (Get FASTA) |
| NP_570824 | (Get FASTA) | |
| GenBank Protein | AAC37545 | (Get FASTA) |
| AAC37546 | (Get FASTA) | |
| AAH10647 | (Get FASTA) | |
| AAV38490 | (Get FASTA) | |
| ADQ32436 | (Get FASTA) | |
| BAA22370 | (Get FASTA) | |
| BAD97337 | (Get FASTA) | |
| BAF82336 | (Get FASTA) | |
| BAG36991 | (Get FASTA) | |
| CAL38108 | (Get FASTA) | |
| CAL38529 | (Get FASTA) | |
| EAX10346 | (Get FASTA) | |
| EAX10347 | (Get FASTA) | |
| EAX10348 | (Get FASTA) | |
| EAX10349 | (Get FASTA) | |
| EAX10350 | (Get FASTA) | |
| EAX10351 | (Get FASTA) | |
| EAX10352 | (Get FASTA) | |
| EAX10353 | (Get FASTA) | |
| P60880 | (Get FASTA) |
Promoters| RGD ID: | 6851842 | ||||||||||
| Promoter ID: | EP73726 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | HS_SNAP25 | ||||||||||
| Description: | Synaptosomal-associated protein, 25kDa , transcript variant 1. | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Experiment Methods: | NEDO full length human cDNA sequencing project.; Oligo-capping | ||||||||||
| Position: |
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| RGD ID: | 7235863 | ||||||||||
| Promoter ID: | EPDNEW_H23677 | ||||||||||
| Type: | initiation region | ||||||||||
| Name: | SNAP25_1 | ||||||||||
| Description: | synaptosomal-associated protein, 25kDa | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
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| RGD ID: | 6871210 | ||||||||||
| Promoter ID: | EPDNEW_H8770 | ||||||||||
| Type: | multiple initiation site | ||||||||||
| Name: | HSPA1B_1 | ||||||||||
| Description: | heat shock 70kDa protein 1B | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||||
| Position: |
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External Database Links| Database | Acc Id | Source(s) |
| COSMIC | SNAP25 | COSMIC |
| Ensembl Genes | ENSG00000132639 | ENTREZGENE |
| Ensembl Protein | ENSP00000254976 | ENTREZGENE |
| ENSP00000307341 | ENTREZGENE | |
| Ensembl Transcript | ENST00000254976 | ENTREZGENE |
| ENST00000304886 | ENTREZGENE | |
| Entrez Gene | 6616 | ENTREZGENE |
| Germonline | ENSG00000132639 | |
| HGNC ID | 11132 | ENTREZGENE |
| HomoloGene Group ID | 13311 | ENTREZGENE |
| HPRD ID | 02637 | ENTREZGENE |
| InterPro | SNAP-25 | UniProtKB/Swiss-Prot |
| T_SNARE_dom | UniProtKB/Swiss-Prot | |
| IPI | IPI00010470 | UniProtKB/Swiss-Prot |
| IPI00107625 | UniProtKB/Swiss-Prot | |
| KEGG Report | hsa:6616 | ENTREZGENE, UniProtKB/Swiss-Prot |
| OMIM | 600322 | OMIM |
| Pfam | SNAP-25 | UniProtKB/Swiss-Prot |
| SNARE | UniProtKB/Swiss-Prot | |
| PharmGKB | PA35980 | PharmGKB |
| PROSITE | T_SNARE | UniProtKB/Swiss-Prot |
| SMART | t_SNARE | UniProtKB/Swiss-Prot |
| UniGene | Hs.167317 | ENTREZGENE |
| UniProt | SNP25_HUMAN | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2011-08-16 | SNAP25 | synaptosomal-associated protein, 25kDa | SNAP25 | synaptosomal-associated protein, 25kDa | Symbol and/or name change | 39860 | APPROVED |
| More on SNAP25 | |||
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Entrez Gene | ||
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Ensembl Gene | ||
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HGNC Report | ||
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NCBI Map Viewer | ||
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Vista | ||
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Vista + UCSC | ||
| RGD Object Information | |
| RGD ID: | 734151 |
| Created: | 2004-01-12 |
| Species: | Homo sapiens |
| Last Modified: | 2013-03-19 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




