GATA3 (GATA binding protein 3) - Rat Genome Database

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Gene: GATA3 (GATA binding protein 3) Homo sapiens
Analyze
Symbol: GATA3
Name: GATA binding protein 3
RGD ID: 733638
HGNC Page HGNC:4172
Description: Enables several functions, including DNA-binding transcription factor activity, RNA polymerase II-specific; E-box binding activity; and HMG box domain binding activity. Involved in several processes, including cellular response to cytokine stimulus; negative regulation of endothelial cell apoptotic process; and regulation of gene expression. Acts upstream of or within T cell differentiation and positive regulation of transcription by RNA polymerase II. Located in nucleoplasm. Part of chromatin. Implicated in hypoparathyroidism; hypoparathyroidism-deafness-renal disease syndrome; nephrosis; and sensorineural hearing loss. Biomarker of asthma.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: GATA-binding factor 3; gata-binding protein 3; HDR; HDRS; MGC2346; MGC5199; MGC5445; trans-acting T-cell-specific transcription factor GATA-3
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38108,045,333 - 8,075,198 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl108,045,378 - 8,075,198 (+)EnsemblGRCh38hg38GRCh38
GRCh37108,096,651 - 8,117,161 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36108,136,673 - 8,157,170 (+)NCBINCBI36Build 36hg18NCBI36
Build 34108,136,672 - 8,157,170NCBI
Celera108,022,059 - 8,042,539 (+)NCBICelera
Cytogenetic Map10p14NCBI
HuRef108,015,002 - 8,035,471 (+)NCBIHuRef
CHM1_1108,096,969 - 8,117,441 (+)NCBICHM1_1
T2T-CHM13v2.0108,046,004 - 8,076,094 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,4-benzoquinone  (ISO)
1-naphthyl isothiocyanate  (ISO)
13,14-dihydro-15-ketoprostaglandin D2  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-tert-butylhydroquinone  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (EXP)
4-hydroxynon-2-enal  (EXP,ISO)
5-aza-2'-deoxycytidine  (EXP)
5-chloro-7-iodoquinolin-8-ol  (EXP)
6-propyl-2-thiouracil  (EXP,ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (EXP)
alpha-galactosylceramide  (ISO)
aluminium hydroxide  (ISO)
ammonium chloride  (ISO)
apigenin  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
atrazine  (ISO)
belinostat  (EXP)
benzalkonium chloride  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
benzo[b]fluoranthene  (ISO)
berberine  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bleomycin A2  (ISO)
buta-1,3-diene  (ISO)
calcitriol  (EXP)
carbamazepine  (EXP)
carbon nanotube  (ISO)
chlordecone  (ISO)
chloroprene  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chrysin  (ISO)
cisplatin  (EXP)
cobalt dichloride  (ISO)
coumestrol  (EXP)
cyclophosphamide  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (EXP)
diazinon  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (ISO)
disodium selenite  (EXP)
diuron  (ISO)
dorsomorphin  (EXP)
endosulfan  (ISO)
entinostat  (EXP)
ethanol  (ISO)
ethyl 3,4-dihydroxybenzoate  (ISO)
flutamide  (ISO)
folic acid  (ISO)
fragrance  (EXP)
gamma-hexachlorocyclohexane  (EXP)
gemfibrozil  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (EXP)
ibuprofen  (ISO)
ionomycin  (ISO)
irinotecan  (EXP)
isotretinoin  (EXP)
ketoconazole  (ISO)
L-methionine  (ISO)
lead diacetate  (ISO)
levamisole  (ISO)
Licochalcone B  (EXP)
Mecamylamine  (EXP)
mercury dibromide  (EXP)
methimazole  (ISO)
methotrexate  (EXP)
methylisothiazolinone  (EXP)
methylmercury chloride  (EXP)
monocrotaline  (EXP)
Morroniside  (ISO)
N'-Nitrosonornicotine  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (EXP)
Nonylphenol  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (EXP)
panobinostat  (EXP)
paracetamol  (ISO)
paraquat  (ISO)
PCB138  (ISO)
perfluorohexanesulfonic acid  (ISO)
phenylmercury acetate  (EXP)
phenytoin  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (ISO)
potassium chloride  (ISO)
remdesivir  (ISO)
resveratrol  (ISO)
rofecoxib  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
SB 431542  (EXP)
sodium arsenite  (EXP,ISO)
SR 144528  (ISO)
tacrine  (ISO)
tamoxifen  (EXP,ISO)
testosterone  (ISO)
thalidomide  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
toluene  (ISO)
topotecan  (ISO)
Tributyltin oxide  (ISO)
trichostatin A  (EXP)
triclosan  (EXP)
trimellitic anhydride  (ISO)
troglitazone  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vorinostat  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
anatomical structure formation involved in morphogenesis  (IEA,ISO,ISS)
anatomical structure morphogenesis  (IEA,TAS)
aortic valve morphogenesis  (IEA,ISS)
axon guidance  (IEA,ISO)
canonical Wnt signaling pathway  (IEA,ISS)
cardiac right ventricle morphogenesis  (IEA,ISS)
cartilage development  (IEA)
cell activation  (IEA,ISO)
cell differentiation  (IEA)
cell fate commitment  (IBA)
cell fate determination  (IEA,ISO,ISS)
cell maturation  (IEA,ISO)
cell morphogenesis  (IEA,ISO)
cell population proliferation  (IEA,ISO)
cellular response to BMP stimulus  (IEA,ISO)
cellular response to cytokine stimulus  (IEA,ISO)
cellular response to interferon-alpha  (IEP)
cellular response to interleukin-4  (IEA,IEP,ISO)
cellular response to tumor necrosis factor  (IEP)
chromatin remodeling  (IEA,ISO)
cochlea development  (ISO)
defense response  (TAS)
developmental growth  (IEA,ISO)
ear development  (IMP)
embryonic hemopoiesis  (IEA,ISO)
embryonic organ development  (IBA,IEA,ISO)
erythrocyte differentiation  (IEA,ISO)
gene expression  (IEA)
homeostasis of number of cells  (IEA,ISO)
humoral immune response  (IEA,ISO)
immune system development  (IBA)
in utero embryonic development  (IEA,ISO)
inflammatory response  (IEA,ISS)
innate immune response  (IEA)
inner ear morphogenesis  (IEA,ISO)
kidney development  (IMP)
lens development in camera-type eye  (IEA,ISO)
lymphocyte migration  (IDA)
macrophage differentiation  (IEA,ISS)
male gonad development  (IEA,ISS)
mast cell differentiation  (IEA,ISO)
mesenchymal to epithelial transition  (IDA)
mesonephros development  (IEA,ISO,ISS)
negative regulation of cell cycle  (IEA,IMP,ISO)
negative regulation of cell motility  (IMP)
negative regulation of cell population proliferation  (IEA,ISO,ISS)
negative regulation of cell proliferation involved in mesonephros development  (IEA,ISS)
negative regulation of DNA demethylation  (IEA,ISO)
negative regulation of DNA-templated transcription  (IMP)
negative regulation of endothelial cell apoptotic process  (IMP)
negative regulation of epithelial to mesenchymal transition  (IMP)
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation  (IEA,ISS)
negative regulation of gene expression  (IEA,ISO)
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation  (IEA,ISS)
negative regulation of inflammatory response  (IMP)
negative regulation of interleukin-2 production  (IEA,ISO)
negative regulation of mammary gland epithelial cell proliferation  (IDA)
negative regulation of transcription by RNA polymerase II  (IBA,IEA,ISO)
negative regulation of type II interferon production  (IEA,ISO)
nephric duct formation  (IEA,ISS)
nephric duct morphogenesis  (IEA,ISS)
nervous system development  (IEA,ISO)
neuron differentiation  (IEA,ISO)
neuron migration  (IEA,ISO)
norepinephrine biosynthetic process  (IEA,ISO,ISS)
otic vesicle development  (IEA,ISO)
parathyroid gland development  (IEA,ISO)
parathyroid hormone secretion  (IEA,ISO)
pharyngeal system development  (IEA,ISS)
phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISS)
positive regulation of cell differentiation  (IEA,ISO)
positive regulation of cytokine production  (IEA,ISO)
positive regulation of DNA-templated transcription  (IDA,IEA,IMP,ISO,ISS)
positive regulation of endothelial cell migration  (IMP)
positive regulation of gene expression  (IEA,ISO)
positive regulation of interleukin-13 production  (IDA,IEA,IMP,ISO)
positive regulation of interleukin-4 production  (IEA,ISO,ISS)
positive regulation of interleukin-5 production  (IDA,IEA,ISO)
positive regulation of miRNA transcription  (IDA)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IMP)
positive regulation of signal transduction  (IMP)
positive regulation of T cell differentiation  (IEA,ISS)
positive regulation of T-helper 2 cell cytokine production  (IEA,ISO)
positive regulation of thyroid hormone generation  (IMP)
positive regulation of transcription by RNA polymerase II  (IBA,IDA,IEA,IMP,ISO,ISS)
positive regulation of ureteric bud formation  (IEA,ISS)
post-embryonic development  (IEA,ISO)
pro-T cell differentiation  (IEA,ISO)
regulation of cellular response to X-ray  (IMP)
regulation of cytokine production  (IEA,ISO,ISS)
regulation of epithelial cell differentiation  (IBA)
regulation of establishment of cell polarity  (IEA,ISO)
regulation of nephron tubule epithelial cell differentiation  (IEA,ISS)
regulation of neuron apoptotic process  (IEA,ISO)
regulation of neuron projection development  (IEA,ISO)
regulation of T-helper cell differentiation  (IEA,ISO)
regulation of transcription by RNA polymerase II  (IEA,ISO)
response to estrogen  (IEP)
response to ethanol  (ISO)
response to gamma radiation  (ISO)
response to virus  (IEP)
response to xenobiotic stimulus  (ISO)
signal transduction  (IEA,ISS)
sympathetic nervous system development  (IEA,ISO,ISS)
system development  (IEA)
T cell differentiation  (IDA,IEA)
T cell differentiation in thymus  (IEA,ISO)
T cell receptor signaling pathway  (IEA,ISS)
T-helper 2 cell differentiation  (IDA,IEA,ISO)
thymic T cell selection  (IEA,ISO)
thymus development  (IEA,ISO)
TOR signaling  (IEA,ISS)
transcription by RNA polymerase II  (IEA,ISO)
type IV hypersensitivity  (ISO)
ureter maturation  (IEA,ISO)
ureter morphogenesis  (IEA,ISO)
ureteric bud formation  (IEA,ISS)
uterus development  (IEA,ISS)
ventricular septum development  (IEA,ISS)

Cellular Component
chromatin  (IDA,ISA)
nucleoplasm  (IDA,IEA,TAS)
nucleus  (IBA,IDA,IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Maternal Endotoxin Exposure Attenuate Allergic Airway Disease in Infant Rats. Cao L, etal., Am J Physiol Lung Cell Mol Physiol. 2010 Jan 29.
2. GATA-3 expression in the development of anterior chamber associated immune deviation. Fu T, etal., Chin Med J (Engl). 2005 Dec 5;118(23):2000-4.
3. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
4. Alterations of T helper lymphocyte subpopulations in sepsis, severe sepsis, and septic shock: a prospective observational study. Li J, etal., Inflammation. 2015;38(3):995-1002. doi: 10.1007/s10753-014-0063-3.
5. Gene expression of the GATA-3 transcription factor is increased in atopic asthma. Nakamura Y, etal., J Allergy Clin Immunol. 1999 Feb;103(2 Pt 1):215-22.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
8. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
12. GATA3 haplo-insufficiency causes human HDR syndrome. Van Esch H, etal., Nature 2000 Jul 27;406(6794):419-22.
13. Effect and mechanism of ligustrazine on Th1/Th2 cytokines in a rat asthma model. Xiong L, etal., Am J Chin Med. 2007;35(6):1011-20.
14. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363.
Additional References at PubMed
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PMID:18619618   PMID:18676680   PMID:18701459   PMID:18772129   PMID:18826115   PMID:18849568   PMID:19043799   PMID:19057839   PMID:19059610   PMID:19082709   PMID:19084267   PMID:19092634  
PMID:19094228   PMID:19170196   PMID:19189213   PMID:19232384   PMID:19247692   PMID:19248112   PMID:19248180   PMID:19253381   PMID:19258923   PMID:19261198   PMID:19274049   PMID:19336263  
PMID:19342088   PMID:19346497   PMID:19411068   PMID:19452711   PMID:19473628   PMID:19483726   PMID:19549328   PMID:19559773   PMID:19615257   PMID:19625176   PMID:19639723   PMID:19674970  
PMID:19692168   PMID:19719829   PMID:19723756   PMID:19728080   PMID:19735555   PMID:19798694   PMID:19805038   PMID:19861286   PMID:19946260   PMID:20130088   PMID:20154722   PMID:20189993  
PMID:20211142   PMID:20237292   PMID:20237496   PMID:20333526   PMID:20368097   PMID:20484083   PMID:20503287   PMID:20554961   PMID:20583921   PMID:20660789   PMID:20696860   PMID:20705609  
PMID:20716621   PMID:20855495   PMID:21037568   PMID:21048031   PMID:21114556   PMID:21120445   PMID:21157112   PMID:21242646   PMID:21289214   PMID:21329183   PMID:21334719   PMID:21399899  
PMID:21468546   PMID:21611195   PMID:21638273   PMID:21682737   PMID:21743959   PMID:21761347   PMID:21873635   PMID:21878914   PMID:21892208   PMID:21930782   PMID:22019771   PMID:22039304  
PMID:22120723   PMID:22336257   PMID:22391183   PMID:22529382   PMID:22607700   PMID:22706858   PMID:22909160   PMID:22951069   PMID:22951729   PMID:22982890   PMID:22985730   PMID:23063330  
PMID:23172872   PMID:23203342   PMID:23266442   PMID:23291697   PMID:23308012   PMID:23354167   PMID:23375642   PMID:23395819   PMID:23403292   PMID:23413906   PMID:23428429   PMID:23430443  
PMID:23435732   PMID:23446338   PMID:23453625   PMID:23549873   PMID:23577196   PMID:23599157   PMID:23604756   PMID:23715162   PMID:23817569   PMID:23906664   PMID:23939152   PMID:23958551  
PMID:23996088   PMID:24061521   PMID:24068962   PMID:24121175   PMID:24124001   PMID:24134931   PMID:24141364   PMID:24145643   PMID:24149102   PMID:24235142   PMID:24235972   PMID:24315206  
PMID:24327562   PMID:24338248   PMID:24346062   PMID:24363163   PMID:24390342   PMID:24415069   PMID:24421220   PMID:24434941   PMID:24448324   PMID:24477928   PMID:24504018   PMID:24512009  
PMID:24549642   PMID:24614117   PMID:24622013   PMID:24660543   PMID:24711443   PMID:24713735   PMID:24737748   PMID:24743840   PMID:24745616   PMID:24758297   PMID:24766459   PMID:24813204  
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PMID:26970513   PMID:27018307   PMID:27036044   PMID:27041579   PMID:27048872   PMID:27053161   PMID:27067807   PMID:27082299   PMID:27097544   PMID:27151990   PMID:27184484   PMID:27237631  
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PMID:30859636   PMID:30867811   PMID:30868892   PMID:30872657   PMID:30949172   PMID:30971548   PMID:31020542   PMID:31033498   PMID:31075138   PMID:31107186   PMID:31152121   PMID:31238969  
PMID:31256192   PMID:31391242   PMID:31405951   PMID:31409898   PMID:31424658   PMID:31469885   PMID:31492753   PMID:31519704   PMID:31588232   PMID:31636361   PMID:31685800   PMID:31690668  
PMID:31718619   PMID:31754326   PMID:31831043   PMID:31831790   PMID:31856612   PMID:31856849   PMID:31911546   PMID:31935430   PMID:32193825   PMID:32232341   PMID:32296183   PMID:32302522  
PMID:32439362   PMID:32442337   PMID:32472715   PMID:32538432   PMID:32587399   PMID:32687248   PMID:32737715   PMID:32769351   PMID:32769430   PMID:32814053   PMID:32888937   PMID:32894760  
PMID:32938228   PMID:32988889   PMID:32991930   PMID:33040251   PMID:33275800   PMID:33298139   PMID:33382535   PMID:33420376   PMID:33462316   PMID:33501493   PMID:33566340   PMID:33570661  
PMID:33571371   PMID:33604757   PMID:33791299   PMID:33887302   PMID:34026424   PMID:34057115   PMID:34099719   PMID:34117603   PMID:34120367   PMID:34225008   PMID:34344074   PMID:34354706  
PMID:34432264   PMID:34459144   PMID:34537772   PMID:34591612   PMID:34680134   PMID:34690921   PMID:34815386   PMID:34864659   PMID:34979772   PMID:35013218   PMID:35039449   PMID:35115686  
PMID:35131666   PMID:35140242   PMID:35388661   PMID:35413381   PMID:35503256   PMID:35510955   PMID:35673726   PMID:35806269   PMID:35819319   PMID:35926808   PMID:35993027   PMID:36058260  
PMID:36129980   PMID:36149748   PMID:36152841   PMID:36252018   PMID:36320040   PMID:36463230   PMID:36649695   PMID:36806146   PMID:36821040   PMID:36946049   PMID:36952466   PMID:36990085  
PMID:37036735   PMID:37074839   PMID:37096814   PMID:37230023   PMID:37353480   PMID:37578068   PMID:37726118   PMID:37779309   PMID:37965687   PMID:38173189   PMID:38224134   PMID:38317241  


Genomics

Comparative Map Data
GATA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38108,045,333 - 8,075,198 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl108,045,378 - 8,075,198 (+)EnsemblGRCh38hg38GRCh38
GRCh37108,096,651 - 8,117,161 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36108,136,673 - 8,157,170 (+)NCBINCBI36Build 36hg18NCBI36
Build 34108,136,672 - 8,157,170NCBI
Celera108,022,059 - 8,042,539 (+)NCBICelera
Cytogenetic Map10p14NCBI
HuRef108,015,002 - 8,035,471 (+)NCBIHuRef
CHM1_1108,096,969 - 8,117,441 (+)NCBICHM1_1
T2T-CHM13v2.0108,046,004 - 8,076,094 (+)NCBIT2T-CHM13v2.0
Gata3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3929,861,889 - 9,894,845 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl29,861,889 - 9,894,845 (-)EnsemblGRCm39 Ensembl
GRCm3829,857,078 - 9,887,953 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl29,857,078 - 9,890,034 (-)EnsemblGRCm38mm10GRCm38
MGSCv3729,778,705 - 9,800,227 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3629,774,931 - 9,795,629 (-)NCBIMGSCv36mm8
Celera29,794,542 - 9,816,062 (-)NCBICelera
Cytogenetic Map2A1NCBI
cM Map26.69NCBI
Gata3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81773,544,234 - 73,575,670 (+)NCBIGRCr8
mRatBN7.21768,643,760 - 68,666,000 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1768,643,873 - 68,665,391 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1772,127,538 - 72,146,576 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01775,956,280 - 75,975,318 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01769,999,324 - 70,018,364 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01772,419,752 - 72,452,043 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1772,429,618 - 72,450,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01774,114,785 - 74,137,119 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41779,991,587 - 80,011,574 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11780,002,419 - 80,022,407 (+)NCBI
Celera1768,131,695 - 68,151,337 (+)NCBICelera
Cytogenetic Map17q12.3NCBI
Gata3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542124,457,496 - 24,478,744 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542124,448,446 - 24,477,885 (+)NCBIChiLan1.0ChiLan1.0
GATA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2820,603,369 - 20,624,430 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11020,608,666 - 20,629,453 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0108,075,951 - 8,105,573 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1108,055,853 - 8,086,271 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl108,064,207 - 8,086,272 (+)Ensemblpanpan1.1panPan2
GATA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1228,068,143 - 28,098,445 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl228,069,051 - 28,087,760 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha225,104,703 - 25,134,953 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0228,443,699 - 28,464,623 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl228,444,605 - 28,465,652 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1225,552,826 - 25,583,058 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0226,396,168 - 26,425,115 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0227,112,635 - 27,142,926 (-)NCBIUU_Cfam_GSD_1.0
Gata3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934430,614,585 - 30,645,254 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364846,780,692 - 6,800,966 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364846,780,692 - 6,800,883 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GATA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1063,367,663 - 63,388,859 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11063,367,684 - 63,397,977 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21069,582,743 - 69,601,480 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GATA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.198,101,404 - 8,122,762 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl98,101,432 - 8,123,064 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605113,489,149 - 13,518,902 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gata3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247752,994,164 - 3,015,392 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247752,985,077 - 3,014,567 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GATA3
284 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_001002295.2(GATA3):c.108_109del (p.Met36fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000022538] Chr10:8055763..8055764 [GRCh38]
Chr10:8097726..8097727 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1025G>A (p.Cys342Tyr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000022539] Chr10:8069573 [GRCh38]
Chr10:8111536 [GRCh37]
Chr10:10p14
pathogenic
GATA3, 900-KB DEL deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000018098] Chr10:10p15 pathogenic
GATA3, 250-KB DEL deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000018099] Chr10:10p15 pathogenic
NM_001002295.2(GATA3):c.465_513del (p.Thr156fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000018100] Chr10:8058527..8058575 [GRCh38]
Chr10:8100490..8100538 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.947_958del (p.Thr316_Ala319del) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000018101] Chr10:8069493..8069504 [GRCh38]
Chr10:8111456..8111467 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.829C>T (p.Arg277Ter) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000018102]|not provided [RCV003556041] Chr10:8064043 [GRCh38]
Chr10:8106006 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.823T>A (p.Trp275Arg) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000018103] Chr10:8064037 [GRCh38]
Chr10:8106000 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.901delinsAACCCT (p.Leu301fs) indel Hypoparathyroidism, deafness, renal disease syndrome [RCV000018104] Chr10:8064115 [GRCh38]
Chr10:8106078 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1099C>T (p.Arg367Ter) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000018105]|not provided [RCV000760379] Chr10:8073787 [GRCh38]
Chr10:8115750 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic
NM_001002295.2(GATA3):c.431del (p.Gly144fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000018106] Chr10:8058489 [GRCh38]
Chr10:8100452 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.478del (p.Asp160fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000018107] Chr10:8058540 [GRCh38]
Chr10:8100503 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.924+2delinsGCTTACTTCCC indel Hypoparathyroidism, deafness, renal disease syndrome [RCV000018108] Chr10:8064140 [GRCh38]
Chr10:8106103 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1059A>T (p.Arg353Ser) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000018109] Chr10:8073747 [GRCh38]
Chr10:8115710 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.28T>G (p.Trp10Gly) single nucleotide variant not provided [RCV001571398] Chr10:8055683 [GRCh38]
Chr10:8097646 [GRCh37]
Chr10:10p14
uncertain significance
GRCh38/hg38 10p15.3-14(chr10:90421-8442783)x3 copy number gain See cases [RCV000051107] Chr10:90421..8442783 [GRCh38]
Chr10:224406..8484746 [GRCh37]
Chr10:126361..8524752 [NCBI36]
Chr10:10p15.3-14
pathogenic
GRCh38/hg38 10p15.3-13(chr10:90421-15569528)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052496]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052496]|See cases [RCV000052496] Chr10:90421..15569528 [GRCh38]
Chr10:224406..15611527 [GRCh37]
Chr10:126361..15651533 [NCBI36]
Chr10:10p15.3-13
pathogenic
GRCh38/hg38 10p15.1-13(chr10:4802753-16823491)x1 copy number loss See cases [RCV000052500] Chr10:4802753..16823491 [GRCh38]
Chr10:4844945..16865490 [GRCh37]
Chr10:4834945..16905496 [NCBI36]
Chr10:10p15.1-13
pathogenic
GRCh38/hg38 10p15.3-12.31(chr10:69261-19184047)x3 copy number gain See cases [RCV000053507] Chr10:69261..19184047 [GRCh38]
Chr10:224406..19472976 [GRCh37]
Chr10:105201..19512982 [NCBI36]
Chr10:10p15.3-12.31
pathogenic
GRCh38/hg38 10p15.3-12.2(chr10:90221-22567425)x3 copy number gain See cases [RCV000053508] Chr10:90221..22567425 [GRCh38]
Chr10:224406..22856354 [GRCh37]
Chr10:126161..22896360 [NCBI36]
Chr10:10p15.3-12.2
pathogenic
GRCh38/hg38 10p15.3-12.1(chr10:90421-29058318)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053512]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053512]|See cases [RCV000053512] Chr10:90421..29058318 [GRCh38]
Chr10:224406..29347247 [GRCh37]
Chr10:126361..29387253 [NCBI36]
Chr10:10p15.3-12.1
pathogenic
NM_001002295.2(GATA3):c.448C>A (p.Leu150Ile) single nucleotide variant not provided [RCV002515871]|not specified [RCV000121151] Chr10:8058511 [GRCh38]
Chr10:8100474 [GRCh37]
Chr10:10p14
uncertain significance|not provided
NM_001002295.2(GATA3):c.737G>C (p.Gly246Ala) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106312]|not provided [RCV000873280]|not specified [RCV000121152] Chr10:8058800 [GRCh38]
Chr10:8100763 [GRCh37]
Chr10:10p14
benign|likely benign|not provided
NM_001002295.2(GATA3):c.1186G>A (p.Ala396Thr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001108532]|not provided [RCV002225381]|not specified [RCV000121153] Chr10:8073874 [GRCh38]
Chr10:8115837 [GRCh37]
Chr10:10p14
benign|likely benign|not provided
NM_001002295.2(GATA3):c.925-16C>T single nucleotide variant Neoplasm of ovary [RCV000119362] Chr10:8069457 [GRCh38]
Chr10:8111420 [GRCh37]
Chr10:10p14
not provided
NM_001002295.2(GATA3):c.1032C>T (p.Leu344=) single nucleotide variant Familial cancer of breast [RCV000119363] Chr10:8069580 [GRCh38]
Chr10:8111543 [GRCh37]
Chr10:10p14
not provided
NM_001002295.1:c.1482-5C>T single nucleotide variant Familial cancer of breast [RCV000119364] Chr10:10p14 not provided
GRCh38/hg38 10p15.3-13(chr10:73856-12815915)x3 copy number gain See cases [RCV000135340] Chr10:73856..12815915 [GRCh38]
Chr10:119796..12857914 [GRCh37]
Chr10:109796..12897920 [NCBI36]
Chr10:10p15.3-13
pathogenic
GRCh38/hg38 10p15.3-14(chr10:90421-11713049)x3 copy number gain See cases [RCV000135533] Chr10:90421..11713049 [GRCh38]
Chr10:224406..11755048 [GRCh37]
Chr10:126361..11795054 [NCBI36]
Chr10:10p15.3-14
pathogenic|uncertain significance
GRCh38/hg38 10p14-12.31(chr10:7428770-21587752)x1 copy number loss See cases [RCV000137307] Chr10:7428770..21587752 [GRCh38]
Chr10:7470732..21876681 [GRCh37]
Chr10:7510738..21916687 [NCBI36]
Chr10:10p14-12.31
pathogenic|uncertain significance
GRCh38/hg38 10p15.3-13(chr10:70478-15373336)x3 copy number gain See cases [RCV000137384] Chr10:70478..15373336 [GRCh38]
Chr10:224406..15415335 [GRCh37]
Chr10:106418..15455341 [NCBI36]
Chr10:10p15.3-13
uncertain significance
GRCh38/hg38 10p15.3-12.1(chr10:90205-26339978)x3 copy number gain See cases [RCV000138428] Chr10:90205..26339978 [GRCh38]
Chr10:224406..26628907 [GRCh37]
Chr10:126145..26668913 [NCBI36]
Chr10:10p15.3-12.1
pathogenic
GRCh38/hg38 10p15.3-13(chr10:70478-13736564)x1 copy number loss See cases [RCV000138960] Chr10:70478..13736564 [GRCh38]
Chr10:224406..13778564 [GRCh37]
Chr10:106418..13818570 [NCBI36]
Chr10:10p15.3-13
pathogenic
GRCh38/hg38 10p15.1-q11.22(chr10:4604734-48074662)x3 copy number gain See cases [RCV000141497] Chr10:4604734..48074662 [GRCh38]
Chr10:4646926..47531169 [GRCh37]
Chr10:4636926..47125152 [NCBI36]
Chr10:10p15.1-q11.22
benign
GRCh38/hg38 10p15.3-13(chr10:54086-13205916)x3 copy number gain See cases [RCV000142292] Chr10:54086..13205916 [GRCh38]
Chr10:100026..13247916 [GRCh37]
Chr10:90026..13287922 [NCBI36]
Chr10:10p15.3-13
pathogenic
GRCh38/hg38 10p15.3-14(chr10:1601172-9203729)x3 copy number gain See cases [RCV000142241] Chr10:1601172..9203729 [GRCh38]
Chr10:1643367..9245692 [GRCh37]
Chr10:1633367..9285698 [NCBI36]
Chr10:10p15.3-14
likely pathogenic
GRCh38/hg38 10p15.3-12.31(chr10:54086-19336980)x1 copy number loss See cases [RCV000143703] Chr10:54086..19336980 [GRCh38]
Chr10:100026..19625909 [GRCh37]
Chr10:90026..19665915 [NCBI36]
Chr10:10p15.3-12.31
pathogenic|likely pathogenic
GRCh37/hg19 10p15.3-14(chr10:2593113-8484746)x1 copy number loss See cases [RCV000239795] Chr10:2593113..8484746 [GRCh37]
Chr10:10p15.3-14
pathogenic
NM_001002295.2(GATA3):c.681_682insACCACCCCATCAGCACTCACCCGCCCTACGTGCCC (p.Glu228fs) insertion Hypoparathyroidism, deafness, renal disease syndrome [RCV000225007] Chr10:8058727..8058728 [GRCh38]
Chr10:8100690..8100691 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.681dup (p.Glu228fs) duplication not provided [RCV000316770] Chr10:8058741..8058742 [GRCh38]
Chr10:8100704..8100705 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1257G>A (p.Thr419=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000343699]|not provided [RCV002057407]|not specified [RCV000243568] Chr10:8073945 [GRCh38]
Chr10:8115908 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.606T>C (p.Arg202=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000373472]|not provided [RCV002057408]|not specified [RCV000249336] Chr10:8058669 [GRCh38]
Chr10:8100632 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.621C>T (p.Ala207=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000281804]|not provided [RCV002057409]|not specified [RCV000254316] Chr10:8058684 [GRCh38]
Chr10:8100647 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.216G>T (p.Val72=) single nucleotide variant GATA3-related condition [RCV003940139]|Hypoparathyroidism, deafness, renal disease syndrome [RCV000322130]|not provided [RCV001549549]|not specified [RCV001288970] Chr10:8055871 [GRCh38]
Chr10:8097834 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.1179C>T (p.Asn393=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000395824]|not provided [RCV000876221] Chr10:8073867 [GRCh38]
Chr10:8115830 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.480C>G (p.Asp160Glu) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000268412]|not provided [RCV001859788] Chr10:8058543 [GRCh38]
Chr10:8100506 [GRCh37]
Chr10:10p14
benign|likely benign|uncertain significance
NM_001002295.2(GATA3):c.*798G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000346135] Chr10:8074821 [GRCh38]
Chr10:8116784 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.-58C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000370152]|not provided [RCV000843609] Chr10:8055598 [GRCh38]
Chr10:8097561 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.573C>T (p.Pro191=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000323502]|not provided [RCV000870525]|not specified [RCV000602359] Chr10:8058636 [GRCh38]
Chr10:8100599 [GRCh37]
Chr10:10p14
benign|likely benign|conflicting interpretations of pathogenicity
NM_001002295.2(GATA3):c.-69G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000398979] Chr10:8055587 [GRCh38]
Chr10:8097550 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.*1066C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000305094] Chr10:8075089 [GRCh38]
Chr10:8117052 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.*1029C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000399611] Chr10:8075052 [GRCh38]
Chr10:8117015 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.-251G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000399797]|not provided [RCV001672433] Chr10:8055405 [GRCh38]
Chr10:8097368 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.72G>A (p.Pro24=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000271681] Chr10:8055727 [GRCh38]
Chr10:8097690 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1223C>T (p.Ser408Leu) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000288694]|not provided [RCV002522169] Chr10:8073911 [GRCh38]
Chr10:8115874 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*746C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000288951] Chr10:8074769 [GRCh38]
Chr10:8116732 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.*265dup duplication Hypoparathyroidism, deafness, renal disease syndrome [RCV000305598]|not provided [RCV001534739] Chr10:8074278..8074279 [GRCh38]
Chr10:8116241..8116242 [GRCh37]
Chr10:10p14
benign|uncertain significance
NM_001002295.2(GATA3):c.-370+28dup duplication Hypoparathyroidism, deafness, renal disease syndrome [RCV000327406] Chr10:8054906..8054907 [GRCh38]
Chr10:8096869..8096870 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-95G>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000350309] Chr10:8055561 [GRCh38]
Chr10:8097524 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.-413C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000272459] Chr10:8054848 [GRCh38]
Chr10:8096811 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-48G>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000306873]|not provided [RCV000832617] Chr10:8055608 [GRCh38]
Chr10:8097571 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.870C>T (p.Leu290=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000351762]|not provided [RCV002056144] Chr10:8064084 [GRCh38]
Chr10:8106047 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.*26C>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000308952] Chr10:8074049 [GRCh38]
Chr10:8116012 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.-351C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000378488] Chr10:8055305 [GRCh38]
Chr10:8097268 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.1266G>A (p.Pro422=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000401283] Chr10:8073954 [GRCh38]
Chr10:8115917 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.*575A>C single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000331409] Chr10:8074598 [GRCh38]
Chr10:8116561 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.-503_-502dup duplication Hypoparathyroidism, deafness, renal disease syndrome [RCV000380936] Chr10:8054743..8054744 [GRCh38]
Chr10:8096706..8096707 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.840G>C (p.Thr280=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000292370]|not provided [RCV000876658] Chr10:8064054 [GRCh38]
Chr10:8106017 [GRCh37]
Chr10:10p14
benign|likely benign|uncertain significance
NM_001002295.2(GATA3):c.*491A>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000356992] Chr10:8074514 [GRCh38]
Chr10:8116477 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.*664C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000333454]|not provided [RCV003417980] Chr10:8074687 [GRCh38]
Chr10:8116650 [GRCh37]
Chr10:10p14
benign|likely benign|uncertain significance
NM_001002295.2(GATA3):c.436G>A (p.Ala146Thr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000358251] Chr10:8058499 [GRCh38]
Chr10:8100462 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*647A>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000294894] Chr10:8074670 [GRCh38]
Chr10:8116633 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-264G>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000335318] Chr10:8055392 [GRCh38]
Chr10:8097355 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.*93C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000358999]|not provided [RCV001711901] Chr10:8074116 [GRCh38]
Chr10:8116079 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.*612G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000385965] Chr10:8074635 [GRCh38]
Chr10:8116598 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.*517A>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000262217] Chr10:8074540 [GRCh38]
Chr10:8116503 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.706C>G (p.Pro236Ala) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000386611]|not provided [RCV001859789] Chr10:8058769 [GRCh38]
Chr10:8100732 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.-60C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000315548]|not provided [RCV001642932] Chr10:8055596 [GRCh38]
Chr10:8097559 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.*952G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000340308] Chr10:8074975 [GRCh38]
Chr10:8116938 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.631G>A (p.Ala211Thr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000318200] Chr10:8058694 [GRCh38]
Chr10:8100657 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-359G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000342415]|not provided [RCV001550516] Chr10:8055297 [GRCh38]
Chr10:8097260 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.57C>T (p.Leu19=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000366165]|not provided [RCV003556316] Chr10:8055712 [GRCh38]
Chr10:8097675 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.-49C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000391765]|not specified [RCV000602004] Chr10:8055607 [GRCh38]
Chr10:8097570 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.-148A>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000281313] Chr10:8055508 [GRCh38]
Chr10:8097471 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*267G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000260951] Chr10:8074290 [GRCh38]
Chr10:8116253 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-369-11C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000282786] Chr10:8055276 [GRCh38]
Chr10:8097239 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*895T>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000283007] Chr10:8074918 [GRCh38]
Chr10:8116881 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*264_*265dup duplication Hypoparathyroidism, deafness, renal disease syndrome [RCV000360348]|not provided [RCV001582930] Chr10:8074278..8074279 [GRCh38]
Chr10:8116241..8116242 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.-287G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000279356] Chr10:8055369 [GRCh38]
Chr10:8097332 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1201_1202del (p.Met401fs) deletion not provided [RCV000489658] Chr10:8073889..8073890 [GRCh38]
Chr10:8115852..8115853 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic
NM_001002295.2(GATA3):c.359C>T (p.Thr120Met) single nucleotide variant Hearing impairment [RCV001375342]|Hypoparathyroidism, deafness, renal disease syndrome [RCV002496880]|not provided [RCV000488087] Chr10:8058422 [GRCh38]
Chr10:8100385 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.242-1G>C single nucleotide variant not provided [RCV000490094] Chr10:8058304 [GRCh38]
Chr10:8100267 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.53T>G (p.Val18Gly) single nucleotide variant not provided [RCV000722481] Chr10:8055708 [GRCh38]
Chr10:8097671 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*714G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000381012] Chr10:8074737 [GRCh38]
Chr10:8116700 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*105A>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000399254] Chr10:8074128 [GRCh38]
Chr10:8116091 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*356G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000316129] Chr10:8074379 [GRCh38]
Chr10:8116342 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*857A>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000384423] Chr10:8074880 [GRCh38]
Chr10:8116843 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*1072C>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000334352] Chr10:8075095 [GRCh38]
Chr10:8117058 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-370+28del deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000377376] Chr10:8054907 [GRCh38]
Chr10:8096870 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.646dup (p.His216fs) duplication not provided [RCV000598816] Chr10:8058706..8058707 [GRCh38]
Chr10:8100669..8100670 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.260C>G (p.Pro87Arg) single nucleotide variant not provided [RCV000722510] Chr10:8058323 [GRCh38]
Chr10:8100286 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.591G>A (p.Glu197=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002501877]|not provided [RCV001545375] Chr10:8058654 [GRCh38]
Chr10:8100617 [GRCh37]
Chr10:10p14
likely benign
GRCh37/hg19 10p15.3-14(chr10:136361-8850609)x1 copy number loss See cases [RCV000446357] Chr10:136361..8850609 [GRCh37]
Chr10:10p15.3-14
pathogenic
GRCh37/hg19 10p15.3-11.23(chr10:100026-30278548)x3 copy number gain See cases [RCV000447131] Chr10:100026..30278548 [GRCh37]
Chr10:10p15.3-11.23
pathogenic
GRCh37/hg19 10p15.3-14(chr10:2116123-8856296)x3 copy number gain See cases [RCV000445989] Chr10:2116123..8856296 [GRCh37]
Chr10:10p15.3-14
uncertain significance
GRCh37/hg19 10p14(chr10:8056289-8118665)x3 copy number gain See cases [RCV000445717] Chr10:8056289..8118665 [GRCh37]
Chr10:10p14
likely pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3 copy number gain See cases [RCV000448750] Chr10:93297..135378918 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10p14(chr10:7377293-9129131)x1 copy number loss See cases [RCV000448295] Chr10:7377293..9129131 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.790T>C (p.Cys264Arg) single nucleotide variant not provided [RCV000485463] Chr10:8064004 [GRCh38]
Chr10:8105967 [GRCh37]
Chr10:10p14
likely pathogenic|conflicting interpretations of pathogenicity
NM_001002295.2(GATA3):c.742G>A (p.Gly248Arg) single nucleotide variant not provided [RCV001857101]|not specified [RCV000504285] Chr10:8058805 [GRCh38]
Chr10:8100768 [GRCh37]
Chr10:10p14
uncertain significance
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143) copy number gain See cases [RCV000511389] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic|uncertain significance
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3 copy number gain See cases [RCV000510861] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10p15.3-q11.23(chr10:100026-50961640)x3 copy number gain See cases [RCV000510893] Chr10:100026..50961640 [GRCh37]
Chr10:10p15.3-q11.23
pathogenic
NM_001002295.2(GATA3):c.1051-1G>C single nucleotide variant Stage 5 chronic kidney disease [RCV000494924] Chr10:8073738 [GRCh38]
Chr10:8115701 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic
NM_001002295.2(GATA3):c.730C>G (p.Pro244Ala) single nucleotide variant Inborn genetic diseases [RCV003249550] Chr10:8058793 [GRCh38]
Chr10:8100756 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.587del (p.Leu196fs) deletion Inborn genetic diseases [RCV000623135] Chr10:8058650 [GRCh38]
Chr10:8100613 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.213G>C (p.Thr71=) single nucleotide variant not specified [RCV000611537] Chr10:8055868 [GRCh38]
Chr10:8097831 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.332_333dup (p.Trp112fs) duplication Hypoparathyroidism, deafness, renal disease syndrome [RCV003238173] Chr10:8058391..8058392 [GRCh38]
Chr10:8100354..8100355 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.480C>T (p.Asp160=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002498938]|not provided [RCV001698017] Chr10:8058543 [GRCh38]
Chr10:8100506 [GRCh37]
Chr10:10p14
benign|likely benign
GRCh37/hg19 10p15.3-13(chr10:100026-12842179)x1 copy number loss See cases [RCV000512541] Chr10:100026..12842179 [GRCh37]
Chr10:10p15.3-13
pathogenic
NM_001002295.2(GATA3):c.1058G>C (p.Arg353Thr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000709930] Chr10:8073746 [GRCh38]
Chr10:8115709 [GRCh37]
Chr10:10p14
likely pathogenic|not provided
NM_001002295.2(GATA3):c.1055dup (p.Asn352fs) duplication not provided [RCV000722287] Chr10:8073741..8073742 [GRCh38]
Chr10:8115704..8115705 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.959A>G (p.Asn320Ser) single nucleotide variant not provided [RCV001531046] Chr10:8069507 [GRCh38]
Chr10:8111470 [GRCh37]
Chr10:10p14
likely pathogenic
Single allele deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000735901] Chr10:4689760..19120882 [GRCh37]
Chr10:10p15.1-12.31
pathogenic
NM_001002295.2(GATA3):c.951del (p.Cys318fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV001527691] Chr10:8069498 [GRCh38]
Chr10:8111461 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic
GRCh37/hg19 10p14(chr10:8098185-8102887)x1 copy number loss not provided [RCV000737010] Chr10:8098185..8102887 [GRCh37]
Chr10:10p14
benign
GRCh37/hg19 10p14(chr10:8098876-8102887)x1 copy number loss not provided [RCV000737011] Chr10:8098876..8102887 [GRCh37]
Chr10:10p14
benign
GRCh37/hg19 10p15.3-13(chr10:69083-12887271)x3 copy number gain not provided [RCV000749463] Chr10:69083..12887271 [GRCh37]
Chr10:10p15.3-13
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:73232-135524321)x3 copy number gain not provided [RCV000749464] Chr10:73232..135524321 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:98087-135477883)x3 copy number gain not provided [RCV000749465] Chr10:98087..135477883 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
NM_001002295.2(GATA3):c.483C>G (p.Val161=) single nucleotide variant GATA3-related condition [RCV003941013]|not provided [RCV001565261] Chr10:8058546 [GRCh38]
Chr10:8100509 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.732C>T (p.Pro244=) single nucleotide variant not provided [RCV000919546] Chr10:8058795 [GRCh38]
Chr10:8100758 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.*266dup duplication not provided [RCV001567331] Chr10:8074288..8074289 [GRCh38]
Chr10:8116251..8116252 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.701dup (p.Ser237fs) duplication not provided [RCV000761715] Chr10:8058762..8058763 [GRCh38]
Chr10:8100725..8100726 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic
NM_001002295.2(GATA3):c.924+159_924+168del deletion not provided [RCV001569175] Chr10:8064296..8064305 [GRCh38]
Chr10:8106259..8106268 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.330C>T (p.Ser110=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002495881]|not provided [RCV001550954] Chr10:8058393 [GRCh38]
Chr10:8100356 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.948G>A (p.Thr316=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002501362]|not provided [RCV000879309] Chr10:8069496 [GRCh38]
Chr10:8111459 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.705C>T (p.Pro235=) single nucleotide variant not provided [RCV000920771] Chr10:8058768 [GRCh38]
Chr10:8100731 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.900C>T (p.Pro300=) single nucleotide variant not provided [RCV000907837] Chr10:8064114 [GRCh38]
Chr10:8106077 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.89G>A (p.Gly30Asp) single nucleotide variant not provided [RCV000821101]|not specified [RCV002271590] Chr10:8055744 [GRCh38]
Chr10:8097707 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.569T>C (p.Leu190Pro) single nucleotide variant not provided [RCV000994348] Chr10:8058632 [GRCh38]
Chr10:8100595 [GRCh37]
Chr10:10p14
uncertain significance
GRCh37/hg19 10p15.3-13(chr10:100026-15273144)x3 copy number gain not provided [RCV000848062] Chr10:100026..15273144 [GRCh37]
Chr10:10p15.3-13
pathogenic
NM_001002295.2(GATA3):c.708del (p.Ser237fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV000988325]|not provided [RCV002508791] Chr10:8058765 [GRCh38]
Chr10:8100728 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1050+60C>T single nucleotide variant not provided [RCV000842933] Chr10:8069658 [GRCh38]
Chr10:8111621 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.421T>C (p.Leu141=) single nucleotide variant not provided [RCV000841786] Chr10:8058484 [GRCh38]
Chr10:8100447 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1276C>T (p.Pro426Ser) single nucleotide variant not provided [RCV003239153] Chr10:8073964 [GRCh38]
Chr10:8115927 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.375C>T (p.Gly125=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002502768]|not provided [RCV000916006] Chr10:8058438 [GRCh38]
Chr10:8100401 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1055del (p.Asn352fs) deletion not provided [RCV001008631] Chr10:8073742 [GRCh38]
Chr10:8115705 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.540G>A (p.Glu180=) single nucleotide variant not provided [RCV000976083] Chr10:8058603 [GRCh38]
Chr10:8100566 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1130_1139dup (p.His380fs) microsatellite not provided [RCV001009020] Chr10:8073807..8073808 [GRCh38]
Chr10:8115770..8115771 [GRCh37]
Chr10:10p14
likely pathogenic
GRCh37/hg19 10p14(chr10:8011156-9996086)x1 copy number loss not provided [RCV000846807] Chr10:8011156..9996086 [GRCh37]
Chr10:10p14
pathogenic
GRCh37/hg19 10p15.3-13(chr10:100026-15273144)x3 copy number gain not provided [RCV000848090] Chr10:100026..15273144 [GRCh37]
Chr10:10p15.3-13
pathogenic
NM_001002295.2(GATA3):c.1058G>A (p.Arg353Lys) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV000988326] Chr10:8073746 [GRCh38]
Chr10:8115709 [GRCh37]
Chr10:10p14
uncertain significance
GRCh37/hg19 10p14(chr10:8075029-8407665)x3 copy number gain not provided [RCV000846676] Chr10:8075029..8407665 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*598G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001105275] Chr10:8074621 [GRCh38]
Chr10:8116584 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.-561G>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106224] Chr10:8054700 [GRCh38]
Chr10:8096663 [GRCh37]
Chr10:10p14
uncertain significance
NC_000010.10:g.(?_8111416)_(8111581_?)del deletion not provided [RCV003105392] Chr10:8111416..8111581 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.435C>T (p.His145=) single nucleotide variant not provided [RCV003104920] Chr10:8058498 [GRCh38]
Chr10:8100461 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.1050+300_1050+301del deletion not provided [RCV001568288] Chr10:8069888..8069889 [GRCh38]
Chr10:8111851..8111852 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1051-221C>T single nucleotide variant not provided [RCV001552387] Chr10:8073518 [GRCh38]
Chr10:8115481 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.254G>A (p.Cys85Tyr) single nucleotide variant not provided [RCV003106696] Chr10:8058317 [GRCh38]
Chr10:8100280 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.778+33C>T single nucleotide variant not provided [RCV001575883] Chr10:8058874 [GRCh38]
Chr10:8100837 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.924+142_924+143dup duplication not provided [RCV001612346] Chr10:8064268..8064269 [GRCh38]
Chr10:8106231..8106232 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.924+190del deletion not provided [RCV001561249] Chr10:8064312 [GRCh38]
Chr10:8106275 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.242-220C>T single nucleotide variant not provided [RCV001561825] Chr10:8058085 [GRCh38]
Chr10:8100048 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1050+301del deletion not provided [RCV001657395] Chr10:8069888 [GRCh38]
Chr10:8111851 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.924+143dup duplication not provided [RCV001594111] Chr10:8064268..8064269 [GRCh38]
Chr10:8106231..8106232 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.373_375dup (p.Gly125dup) duplication GATA3-related condition [RCV003980696]|Hypoparathyroidism, deafness, renal disease syndrome [RCV002501902]|not provided [RCV001557544] Chr10:8058434..8058435 [GRCh38]
Chr10:8100397..8100398 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.924+49T>C single nucleotide variant not provided [RCV001575301] Chr10:8064187 [GRCh38]
Chr10:8106150 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.273T>A (p.His91Gln) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001580338] Chr10:8058336 [GRCh38]
Chr10:8100299 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1161C>T (p.Pro387=) single nucleotide variant not provided [RCV000927296] Chr10:8073849 [GRCh38]
Chr10:8115812 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.294C>T (p.Asp98=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002505383]|not provided [RCV000932287] Chr10:8058357 [GRCh38]
Chr10:8100320 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.681C>G (p.Pro227=) single nucleotide variant not provided [RCV000898655] Chr10:8058744 [GRCh38]
Chr10:8100707 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.210C>G (p.Ala70=) single nucleotide variant not provided [RCV000887987] Chr10:8055865 [GRCh38]
Chr10:8097828 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.915G>A (p.Lys305=) single nucleotide variant not provided [RCV000916664] Chr10:8064129 [GRCh38]
Chr10:8106092 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.-495G>C single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106225] Chr10:8054766 [GRCh38]
Chr10:8096729 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.708C>A (p.Pro236=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106311] Chr10:8058771 [GRCh38]
Chr10:8100734 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.990G>A (p.Arg330=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106313] Chr10:8069538 [GRCh38]
Chr10:8111501 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.431dup (p.His145fs) duplication GATA3-related condition [RCV003892163]|Hypoparathyroidism, deafness, renal disease syndrome [RCV001089964]|not provided [RCV001862666] Chr10:8058488..8058489 [GRCh38]
Chr10:8100451..8100452 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.324del (p.Ala109fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV001078192] Chr10:8058386 [GRCh38]
Chr10:8100349 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.489G>A (p.Pro163=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001105183] Chr10:8058552 [GRCh38]
Chr10:8100515 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.492C>T (p.Asp164=) single nucleotide variant GATA3-related condition [RCV003938451]|Hypoparathyroidism, deafness, renal disease syndrome [RCV001105184] Chr10:8058555 [GRCh38]
Chr10:8100518 [GRCh37]
Chr10:10p14
likely benign|uncertain significance
NM_001002295.2(GATA3):c.681C>T (p.Pro227=) single nucleotide variant not provided [RCV000912702] Chr10:8058744 [GRCh38]
Chr10:8100707 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.924+34A>G single nucleotide variant not provided [RCV001540977] Chr10:8064172 [GRCh38]
Chr10:8106135 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.924+110G>A single nucleotide variant not provided [RCV001539643] Chr10:8064248 [GRCh38]
Chr10:8106211 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.241+29C>T single nucleotide variant not provided [RCV001541229] Chr10:8055925 [GRCh38]
Chr10:8097888 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.925-268C>T single nucleotide variant not provided [RCV001598177] Chr10:8069205 [GRCh38]
Chr10:8111168 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.613A>T (p.Met205Leu) single nucleotide variant not provided [RCV003231741] Chr10:8058676 [GRCh38]
Chr10:8100639 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.925-78dup duplication not provided [RCV001664981] Chr10:8069382..8069383 [GRCh38]
Chr10:8111345..8111346 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.924+173del deletion not provided [RCV001641394] Chr10:8064311 [GRCh38]
Chr10:8106274 [GRCh37]
Chr10:10p14
benign
GRCh37/hg19 10p15.3-13(chr10:100027-12648149)x3 copy number gain not provided [RCV002472393] Chr10:100027..12648149 [GRCh37]
Chr10:10p15.3-13
uncertain significance
NM_001002295.2(GATA3):c.924+170_924+173del deletion not provided [RCV001560750] Chr10:8064308..8064311 [GRCh38]
Chr10:8106271..8106274 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1051-16dup duplication not provided [RCV001556018] Chr10:8073705..8073706 [GRCh38]
Chr10:8115668..8115669 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.242-143A>G single nucleotide variant not provided [RCV001657501] Chr10:8058162 [GRCh38]
Chr10:8100125 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.925-78del deletion not provided [RCV001655360] Chr10:8069383 [GRCh38]
Chr10:8111346 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.242-139_242-138del deletion not provided [RCV001619035] Chr10:8058166..8058167 [GRCh38]
Chr10:8100129..8100130 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.826C>T (p.Arg276Trp) single nucleotide variant not provided [RCV001590713] Chr10:8064040 [GRCh38]
Chr10:8106003 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.779-211G>A single nucleotide variant not provided [RCV001614136] Chr10:8063782 [GRCh38]
Chr10:8105745 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.779-1748C>A single nucleotide variant not provided [RCV001596311] Chr10:8062245 [GRCh38]
Chr10:8104208 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.925-147A>T single nucleotide variant not provided [RCV001594356] Chr10:8069326 [GRCh38]
Chr10:8111289 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.242-137_242-136insTT insertion not provided [RCV001654665] Chr10:8058168..8058169 [GRCh38]
Chr10:8100131..8100132 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.*383T>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001103360] Chr10:8074406 [GRCh38]
Chr10:8116369 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*320T>C single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001103359] Chr10:8074343 [GRCh38]
Chr10:8116306 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.605G>A (p.Arg202His) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001254605]|not provided [RCV003770326] Chr10:8058668 [GRCh38]
Chr10:8100631 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.327C>T (p.Ala109=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001105182] Chr10:8058390 [GRCh38]
Chr10:8100353 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*588C>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001105273] Chr10:8074611 [GRCh38]
Chr10:8116574 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*592G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001105274] Chr10:8074615 [GRCh38]
Chr10:8116578 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*656G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001105276] Chr10:8074679 [GRCh38]
Chr10:8116642 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*863T>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106408] Chr10:8074886 [GRCh38]
Chr10:8116849 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*987T>G single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106409] Chr10:8075010 [GRCh38]
Chr10:8116973 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.832G>A (p.Asp278Asn) single nucleotide variant Dominant congenital non-syndromic sensorineural hearing loss [RCV001004795] Chr10:8064046 [GRCh38]
Chr10:8106009 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.-80C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001108444] Chr10:8055576 [GRCh38]
Chr10:8097539 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1173G>A (p.Ser391=) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001108531] Chr10:8073861 [GRCh38]
Chr10:8115824 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*22G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001108533] Chr10:8074045 [GRCh38]
Chr10:8116008 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.924+143del deletion not provided [RCV001707075] Chr10:8064269 [GRCh38]
Chr10:8106232 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.241+326A>G single nucleotide variant not provided [RCV001670893] Chr10:8056222 [GRCh38]
Chr10:8098185 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.924+173_924+177del deletion not provided [RCV001614270] Chr10:8064309..8064313 [GRCh38]
Chr10:8106272..8106276 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.864C>G (p.Cys288Trp) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001527690] Chr10:8064078 [GRCh38]
Chr10:8106041 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.924+252G>A single nucleotide variant not provided [RCV001611239] Chr10:8064390 [GRCh38]
Chr10:8106353 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.961T>A (p.Cys321Ser) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001089562] Chr10:8069509 [GRCh38]
Chr10:8111472 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.925-27C>T single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001702938]|not provided [RCV001620491] Chr10:8069446 [GRCh38]
Chr10:8111409 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.924+148TTTC[2] microsatellite not provided [RCV001666480] Chr10:8064286..8064289 [GRCh38]
Chr10:8106249..8106252 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.1050+301dup duplication not provided [RCV001611844] Chr10:8069887..8069888 [GRCh38]
Chr10:8111850..8111851 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.-40G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001103266] Chr10:8055616 [GRCh38]
Chr10:8097579 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.706C>A (p.Pro236Thr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106310]|not provided [RCV003413918] Chr10:8058769 [GRCh38]
Chr10:8100732 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.*747G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001106407] Chr10:8074770 [GRCh38]
Chr10:8116733 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.241+8C>T single nucleotide variant GATA3-related condition [RCV003898093]|Hypoparathyroidism, deafness, renal disease syndrome [RCV001103267] Chr10:8055904 [GRCh38]
Chr10:8097867 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.733delinsCC (p.Thr245fs) indel Hypoparathyroidism, deafness, renal disease syndrome [RCV001197241] Chr10:8058796 [GRCh38]
Chr10:8100759 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1262C>T (p.Thr421Met) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001251020] Chr10:8073950 [GRCh38]
Chr10:8115913 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.708dup (p.Ser237fs) duplication Hypoparathyroidism, deafness, renal disease syndrome [RCV001254692]|not provided [RCV002570570] Chr10:8058764..8058765 [GRCh38]
Chr10:8100727..8100728 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.790T>A (p.Cys264Ser) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001251506] Chr10:8064004 [GRCh38]
Chr10:8105967 [GRCh37]
Chr10:10p14
pathogenic|uncertain significance
NM_001002295.2(GATA3):c.724G>A (p.Gly242Ser) single nucleotide variant GATA3-related condition [RCV003956227]|Hypoparathyroidism, deafness, renal disease syndrome [RCV002506652]|not provided [RCV001539378] Chr10:8058787 [GRCh38]
Chr10:8100750 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.778+65C>T single nucleotide variant not provided [RCV001536760] Chr10:8058906 [GRCh38]
Chr10:8100869 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.389del (p.Leu130fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV001375869] Chr10:8058452 [GRCh38]
Chr10:8100415 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1306C>G (p.Pro436Ala) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001533196]|Neurodevelopmental disorder [RCV001374962] Chr10:8073994 [GRCh38]
Chr10:8115957 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.71C>T (p.Pro24Leu) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001337038]|not provided [RCV001871895] Chr10:8055726 [GRCh38]
Chr10:8097689 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1050+2T>A single nucleotide variant Congenital anomaly of kidney and urinary tract [RCV001328306] Chr10:8069600 [GRCh38]
Chr10:8111563 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.257G>A (p.Arg86His) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001290432] Chr10:8058320 [GRCh38]
Chr10:8100283 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.153dup (p.Asn52Ter) duplication Hearing impairment [RCV001375170] Chr10:8055803..8055804 [GRCh38]
Chr10:8097766..8097767 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.924+173C>T single nucleotide variant not provided [RCV001716005] Chr10:8064311 [GRCh38]
Chr10:8106274 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.1050+19G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002501952]|not provided [RCV001585571] Chr10:8069617 [GRCh38]
Chr10:8111580 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.381_388del (p.Gly128fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV002250007] Chr10:8058440..8058447 [GRCh38]
Chr10:8100403..8100410 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.925-3_925-2del deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV002250008] Chr10:8069470..8069471 [GRCh38]
Chr10:8111433..8111434 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.896G>T (p.Arg299Leu) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002273238]|not provided [RCV003565510] Chr10:8064110 [GRCh38]
Chr10:8106073 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic|uncertain significance
NM_001002295.2(GATA3):c.779-1G>C single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001783345] Chr10:8063992 [GRCh38]
Chr10:8105955 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.778+1G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001799520] Chr10:8058842 [GRCh38]
Chr10:8100805 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1013T>C (p.Val338Ala) single nucleotide variant not provided [RCV001752717] Chr10:8069561 [GRCh38]
Chr10:8111524 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.706C>T (p.Pro236Ser) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002506778]|not provided [RCV001767531] Chr10:8058769 [GRCh38]
Chr10:8100732 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1184C>T (p.Ala395Val) single nucleotide variant not provided [RCV001769353] Chr10:8073872 [GRCh38]
Chr10:8115835 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.724G>C (p.Gly242Arg) single nucleotide variant not provided [RCV001752812] Chr10:8058787 [GRCh38]
Chr10:8100750 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.209C>A (p.Ala70Asp) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002506839]|not provided [RCV001806531] Chr10:8055864 [GRCh38]
Chr10:8097827 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.675C>A (p.Tyr225Ter) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV001822880] Chr10:8058738 [GRCh38]
Chr10:8100701 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1024T>G (p.Cys342Gly) single nucleotide variant not provided [RCV002008508] Chr10:8069572 [GRCh38]
Chr10:8111535 [GRCh37]
Chr10:10p14
uncertain significance
GRCh37/hg19 10p15.3-q11.22(chr10:135655-47688677)x4 copy number gain Mosaic supernumerary isodicentric chromosome 10 [RCV001825164] Chr10:135655..47688677 [GRCh37]
Chr10:10p15.3-q11.22
not provided
NM_001002295.2(GATA3):c.774dup (p.Thr259fs) duplication not provided [RCV001929763] Chr10:8058836..8058837 [GRCh38]
Chr10:8100799..8100800 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.895C>T (p.Arg299Trp) single nucleotide variant Inborn genetic diseases [RCV002657701]|not provided [RCV002045465] Chr10:8064109 [GRCh38]
Chr10:8106072 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.169G>A (p.Gly57Ser) single nucleotide variant not provided [RCV001969384] Chr10:8055824 [GRCh38]
Chr10:8097787 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.464C>T (p.Pro155Leu) single nucleotide variant not provided [RCV001895799] Chr10:8058527 [GRCh38]
Chr10:8100490 [GRCh37]
Chr10:10p14
uncertain significance
GRCh37/hg19 10p14(chr10:8046788-9979612) copy number loss not specified [RCV002052865] Chr10:8046788..9979612 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.530G>A (p.Arg177Gln) single nucleotide variant not provided [RCV001969851] Chr10:8058593 [GRCh38]
Chr10:8100556 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.404del (p.Pro135fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV002051993]|not provided [RCV001999809] Chr10:8058462 [GRCh38]
Chr10:8100425 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.219G>C (p.Gln73His) single nucleotide variant not provided [RCV001969188] Chr10:8055874 [GRCh38]
Chr10:8097837 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.352_353del (p.Ser118fs) microsatellite Hypoparathyroidism, deafness, renal disease syndrome [RCV001823288] Chr10:8058413..8058414 [GRCh38]
Chr10:8100376..8100377 [GRCh37]
Chr10:10p14
pathogenic
GRCh37/hg19 10p15.3-14(chr10:2116123-8856296) copy number gain not specified [RCV002052861] Chr10:2116123..8856296 [GRCh37]
Chr10:10p15.3-14
uncertain significance
GRCh37/hg19 10p14(chr10:7943586-8120292) copy number loss not specified [RCV002052864] Chr10:7943586..8120292 [GRCh37]
Chr10:10p14
pathogenic
GRCh37/hg19 10p15.1-11.21(chr10:6273934-34732521) copy number gain not specified [RCV002052863] Chr10:6273934..34732521 [GRCh37]
Chr10:10p15.1-11.21
pathogenic
NM_001002295.2(GATA3):c.836del (p.Gly279fs) deletion not provided [RCV001944809] Chr10:8064049 [GRCh38]
Chr10:8106012 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1050+2T>C single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV003155447]|not provided [RCV001950897] Chr10:8069600 [GRCh38]
Chr10:8111563 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1135G>A (p.Val379Met) single nucleotide variant not provided [RCV001902084] Chr10:8073823 [GRCh38]
Chr10:8115786 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.858C>A (p.Asn286Lys) single nucleotide variant not provided [RCV001977533] Chr10:8064072 [GRCh38]
Chr10:8106035 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.451_454del (p.Phe151fs) deletion not provided [RCV001953437] Chr10:8058514..8058517 [GRCh38]
Chr10:8100477..8100480 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.493C>T (p.Pro165Ser) single nucleotide variant not provided [RCV002027300] Chr10:8058556 [GRCh38]
Chr10:8100519 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.233C>A (p.Thr78Asn) single nucleotide variant not provided [RCV001931981] Chr10:8055888 [GRCh38]
Chr10:8097851 [GRCh37]
Chr10:10p14
uncertain significance
NC_000010.10:g.(?_8097619)_(8739580_?)del deletion not provided [RCV001906943] Chr10:8097619..8739580 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.916C>T (p.Arg306Ter) single nucleotide variant not provided [RCV002226126] Chr10:8064130 [GRCh38]
Chr10:8106093 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.33G>C (p.Val11=) single nucleotide variant not provided [RCV002085428] Chr10:8055688 [GRCh38]
Chr10:8097651 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.324C>T (p.Thr108=) single nucleotide variant not provided [RCV002087360] Chr10:8058387 [GRCh38]
Chr10:8100350 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.81C>T (p.His27=) single nucleotide variant not provided [RCV002076968] Chr10:8055736 [GRCh38]
Chr10:8097699 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.141G>C (p.Val47=) single nucleotide variant not provided [RCV002152984] Chr10:8055796 [GRCh38]
Chr10:8097759 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.51C>G (p.Ala17=) single nucleotide variant not provided [RCV002098146] Chr10:8055706 [GRCh38]
Chr10:8097669 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.864C>T (p.Cys288=) single nucleotide variant not provided [RCV002176908] Chr10:8064078 [GRCh38]
Chr10:8106041 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.779-8G>C single nucleotide variant not provided [RCV002184282] Chr10:8063985 [GRCh38]
Chr10:8105948 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.45C>T (p.His15=) single nucleotide variant not provided [RCV002220033] Chr10:8055700 [GRCh38]
Chr10:8097663 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.82C>A (p.His28Asn) single nucleotide variant GATA3-related condition [RCV003396896]|not provided [RCV003118771] Chr10:8055737 [GRCh38]
Chr10:8097700 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.260del (p.Pro87fs) deletion See cases [RCV003156182] Chr10:8058321 [GRCh38]
Chr10:8100284 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.473C>T (p.Pro158Leu) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV003130991] Chr10:8058536 [GRCh38]
Chr10:8100499 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.815C>T (p.Thr272Ile) single nucleotide variant not provided [RCV002251659] Chr10:8064029 [GRCh38]
Chr10:8105992 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.843A>G (p.Gly281=) single nucleotide variant not provided [RCV003852779] Chr10:8064057 [GRCh38]
Chr10:8106020 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1256C>T (p.Thr419Met) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002294548]|not provided [RCV003097844] Chr10:8073944 [GRCh38]
Chr10:8115907 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.872A>G (p.Tyr291Cys) single nucleotide variant not provided [RCV002297371] Chr10:8064086 [GRCh38]
Chr10:8106049 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1203G>A (p.Met401Ile) single nucleotide variant not provided [RCV002681711] Chr10:8073891 [GRCh38]
Chr10:8115854 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.924+1G>A single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV002471647]|not provided [RCV002573613] Chr10:8064139 [GRCh38]
Chr10:8106102 [GRCh37]
Chr10:10p14
pathogenic|likely pathogenic
NM_001002295.2(GATA3):c.910C>A (p.Pro304Thr) single nucleotide variant not provided [RCV002298007] Chr10:8064124 [GRCh38]
Chr10:8106087 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.242-13C>T single nucleotide variant not provided [RCV002613370] Chr10:8058292 [GRCh38]
Chr10:8100255 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1185C>T (p.Ala395=) single nucleotide variant not provided [RCV002771055] Chr10:8073873 [GRCh38]
Chr10:8115836 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.127C>T (p.Leu43=) single nucleotide variant not provided [RCV003035212] Chr10:8055782 [GRCh38]
Chr10:8097745 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.608_609del (p.Gly203fs) deletion not provided [RCV002862225] Chr10:8058671..8058672 [GRCh38]
Chr10:8100634..8100635 [GRCh37]
Chr10:10p14
pathogenic
GRCh37/hg19 10p14(chr10:7636590-11590970)x3 copy number gain not provided [RCV002475712] Chr10:7636590..11590970 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.148C>T (p.Leu50Phe) single nucleotide variant Inborn genetic diseases [RCV002793861] Chr10:8055803 [GRCh38]
Chr10:8097766 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1265C>T (p.Pro422Leu) single nucleotide variant not provided [RCV003016937] Chr10:8073953 [GRCh38]
Chr10:8115916 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.295G>A (p.Gly99Ser) single nucleotide variant Inborn genetic diseases [RCV002859154] Chr10:8058358 [GRCh38]
Chr10:8100321 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.241+9G>T single nucleotide variant not provided [RCV002572049] Chr10:8055905 [GRCh38]
Chr10:8097868 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1029G>T (p.Gly343=) single nucleotide variant not provided [RCV002572158] Chr10:8069577 [GRCh38]
Chr10:8111540 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.662C>T (p.Thr221Ile) single nucleotide variant not provided [RCV003020384] Chr10:8058725 [GRCh38]
Chr10:8100688 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1051-15T>A single nucleotide variant not provided [RCV002636559] Chr10:8073724 [GRCh38]
Chr10:8115687 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.149_156del (p.Leu50fs) deletion not provided [RCV002913727] Chr10:8055803..8055810 [GRCh38]
Chr10:8097766..8097773 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.342C>T (p.Leu114=) single nucleotide variant not provided [RCV003055150] Chr10:8058405 [GRCh38]
Chr10:8100368 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.45C>A (p.His15Gln) single nucleotide variant Inborn genetic diseases [RCV002870157]|not provided [RCV003777897] Chr10:8055700 [GRCh38]
Chr10:8097663 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.837C>T (p.Gly279=) single nucleotide variant not provided [RCV002765557] Chr10:8064051 [GRCh38]
Chr10:8106014 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.925-1G>A single nucleotide variant not provided [RCV002894412] Chr10:8069472 [GRCh38]
Chr10:8111435 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.1043T>C (p.Leu348Pro) single nucleotide variant not provided [RCV002508482] Chr10:8069591 [GRCh38]
Chr10:8111554 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.411G>C (p.Ser137=) single nucleotide variant not provided [RCV002594946] Chr10:8058474 [GRCh38]
Chr10:8100437 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.69C>T (p.His23=) single nucleotide variant GATA3-related condition [RCV003916518]|not provided [RCV002710678] Chr10:8055724 [GRCh38]
Chr10:8097687 [GRCh37]
Chr10:10p14
benign|likely benign
NM_001002295.2(GATA3):c.404dup (p.Ala136fs) duplication not provided [RCV003058242] Chr10:8058461..8058462 [GRCh38]
Chr10:8100424..8100425 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.703C>A (p.Pro235Thr) single nucleotide variant not provided [RCV002642711] Chr10:8058766 [GRCh38]
Chr10:8100729 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.205A>G (p.Arg69Gly) single nucleotide variant not provided [RCV002576175] Chr10:8055860 [GRCh38]
Chr10:8097823 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.470C>T (p.Pro157Leu) single nucleotide variant Inborn genetic diseases [RCV002708771] Chr10:8058533 [GRCh38]
Chr10:8100496 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.695G>C (p.Gly232Ala) single nucleotide variant Inborn genetic diseases [RCV002742726] Chr10:8058758 [GRCh38]
Chr10:8100721 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.766C>T (p.Arg256Trp) single nucleotide variant not provided [RCV003039877] Chr10:8058829 [GRCh38]
Chr10:8100792 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.122A>C (p.Tyr41Ser) single nucleotide variant not provided [RCV002851378] Chr10:8055777 [GRCh38]
Chr10:8097740 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.426G>T (p.Ser142=) single nucleotide variant not provided [RCV003029642] Chr10:8058489 [GRCh38]
Chr10:8100452 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1182G>A (p.Pro394=) single nucleotide variant not provided [RCV003009414] Chr10:8073870 [GRCh38]
Chr10:8115833 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.638C>A (p.Ser213Ter) single nucleotide variant not provided [RCV002856118] Chr10:8058701 [GRCh38]
Chr10:8100664 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.896G>A (p.Arg299Gln) single nucleotide variant not provided [RCV003062246] Chr10:8064110 [GRCh38]
Chr10:8106073 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.1113C>A (p.Ser371Arg) single nucleotide variant not provided [RCV003029769] Chr10:8073801 [GRCh38]
Chr10:8115764 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.849C>T (p.Tyr283=) single nucleotide variant GATA3-related condition [RCV003898596]|not provided [RCV002921953] Chr10:8064063 [GRCh38]
Chr10:8106026 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.572C>T (p.Pro191Leu) single nucleotide variant Inborn genetic diseases [RCV002748030] Chr10:8058635 [GRCh38]
Chr10:8100598 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.537C>G (p.Asp179Glu) single nucleotide variant Inborn genetic diseases [RCV002724181] Chr10:8058600 [GRCh38]
Chr10:8100563 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.524C>T (p.Ser175Leu) single nucleotide variant not provided [RCV002634480] Chr10:8058587 [GRCh38]
Chr10:8100550 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.859G>A (p.Ala287Thr) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV003153004] Chr10:8064073 [GRCh38]
Chr10:8106036 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.18C>T (p.Asp6=) single nucleotide variant not provided [RCV002654014] Chr10:8055673 [GRCh38]
Chr10:8097636 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.393dup (p.Val132fs) duplication Deafness, autosomal dominant [RCV003155569] Chr10:8058454..8058455 [GRCh38]
Chr10:8100417..8100418 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.526G>A (p.Ala176Thr) single nucleotide variant Inborn genetic diseases [RCV003213565] Chr10:8058589 [GRCh38]
Chr10:8100552 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.649C>G (p.His217Asp) single nucleotide variant GATA3-related condition [RCV003973777]|Inborn genetic diseases [RCV003190950] Chr10:8058712 [GRCh38]
Chr10:8100675 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.394G>C (p.Val132Leu) single nucleotide variant Inborn genetic diseases [RCV003186269] Chr10:8058457 [GRCh38]
Chr10:8100420 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.454A>C (p.Thr152Pro) single nucleotide variant Inborn genetic diseases [RCV003212226]|not provided [RCV003730468] Chr10:8058517 [GRCh38]
Chr10:8100480 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.827G>T (p.Arg276Leu) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV003142550] Chr10:8064041 [GRCh38]
Chr10:8106004 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.647_681dup (p.Glu228fs) duplication not provided [RCV003222667] Chr10:8058706..8058707 [GRCh38]
Chr10:8100669..8100670 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.10A>G (p.Thr4Ala) single nucleotide variant not provided [RCV003218927] Chr10:8055665 [GRCh38]
Chr10:8097628 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.604C>T (p.Arg202Cys) single nucleotide variant not provided [RCV003326787] Chr10:8058667 [GRCh38]
Chr10:8100630 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.924+3_924+6del deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV003340972] Chr10:8064139..8064142 [GRCh38]
Chr10:8106102..8106105 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.639_648del (p.Ser214fs) deletion Hypoparathyroidism, deafness, renal disease syndrome [RCV003333552] Chr10:8058701..8058710 [GRCh38]
Chr10:8100664..8100673 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.431G>A (p.Gly144Asp) single nucleotide variant not provided [RCV003875376] Chr10:8058494 [GRCh38]
Chr10:8100457 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.52G>A (p.Val18Met) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV003447909] Chr10:8055707 [GRCh38]
Chr10:8097670 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.629G>A (p.Gly210Glu) single nucleotide variant GATA3-related condition [RCV003412321] Chr10:8058692 [GRCh38]
Chr10:8100655 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1083C>T (p.Gly361=) single nucleotide variant GATA3-related condition [RCV003427965] Chr10:8073771 [GRCh38]
Chr10:8115734 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.112G>C (p.Ala38Pro) single nucleotide variant not provided [RCV003417209] Chr10:8055767 [GRCh38]
Chr10:8097730 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.838A>G (p.Thr280Ala) single nucleotide variant not provided [RCV003417210] Chr10:8064052 [GRCh38]
Chr10:8106015 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.568dup (p.Leu190fs) duplication not provided [RCV003579482] Chr10:8058627..8058628 [GRCh38]
Chr10:8100590..8100591 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.925-9del deletion not provided [RCV003825193] Chr10:8069461 [GRCh38]
Chr10:8111424 [GRCh37]
Chr10:10p14
benign
NM_001002295.2(GATA3):c.825G>A (p.Trp275Ter) single nucleotide variant not provided [RCV003577297] Chr10:8064039 [GRCh38]
Chr10:8106002 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.877A>G (p.Lys293Glu) single nucleotide variant not provided [RCV003695477] Chr10:8064091 [GRCh38]
Chr10:8106054 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.778+13T>C single nucleotide variant not provided [RCV003716435] Chr10:8058854 [GRCh38]
Chr10:8100817 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.527C>T (p.Ala176Val) single nucleotide variant not provided [RCV003830306] Chr10:8058590 [GRCh38]
Chr10:8100553 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1051-14del deletion not provided [RCV003659766] Chr10:8073724 [GRCh38]
Chr10:8115687 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.732C>G (p.Pro244=) single nucleotide variant not provided [RCV003660273] Chr10:8058795 [GRCh38]
Chr10:8100758 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.691T>C (p.Ser231Pro) single nucleotide variant not provided [RCV003666295] Chr10:8058754 [GRCh38]
Chr10:8100717 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.322A>G (p.Thr108Ala) single nucleotide variant not provided [RCV003664032] Chr10:8058385 [GRCh38]
Chr10:8100348 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.778+5G>T single nucleotide variant not provided [RCV003697811] Chr10:8058846 [GRCh38]
Chr10:8100809 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1240A>G (p.Ser414Gly) single nucleotide variant not provided [RCV003724676] Chr10:8073928 [GRCh38]
Chr10:8115891 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.147G>A (p.Val49=) single nucleotide variant not provided [RCV003726334] Chr10:8055802 [GRCh38]
Chr10:8097765 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.163G>A (p.Gly55Ser) single nucleotide variant not provided [RCV003851213] Chr10:8055818 [GRCh38]
Chr10:8097781 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.55C>T (p.Leu19Phe) single nucleotide variant not provided [RCV003672539] Chr10:8055710 [GRCh38]
Chr10:8097673 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.383G>A (p.Gly128Glu) single nucleotide variant not provided [RCV003832757] Chr10:8058446 [GRCh38]
Chr10:8100409 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.399C>T (p.Tyr133=) single nucleotide variant not provided [RCV003836802] Chr10:8058462 [GRCh38]
Chr10:8100425 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.373G>A (p.Gly125Ser) single nucleotide variant not provided [RCV003700990] Chr10:8058436 [GRCh38]
Chr10:8100399 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.333del (p.Trp112fs) deletion not provided [RCV003700088] Chr10:8058392 [GRCh38]
Chr10:8100355 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.948G>T (p.Thr316=) single nucleotide variant not provided [RCV003710147] Chr10:8069496 [GRCh38]
Chr10:8111459 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.188A>G (p.Tyr63Cys) single nucleotide variant not provided [RCV003731086] Chr10:8055843 [GRCh38]
Chr10:8097806 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.279_289del (p.Leu94fs) deletion not provided [RCV003711788] Chr10:8058341..8058351 [GRCh38]
Chr10:8100304..8100314 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.800G>C (p.Cys267Ser) single nucleotide variant not provided [RCV003683021] Chr10:8064014 [GRCh38]
Chr10:8105977 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1272C>T (p.His424=) single nucleotide variant not provided [RCV003843504] Chr10:8073960 [GRCh38]
Chr10:8115923 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.84C>T (p.His28=) single nucleotide variant not provided [RCV003554424] Chr10:8055739 [GRCh38]
Chr10:8097702 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1275G>A (p.Pro425=) single nucleotide variant not provided [RCV003738022] Chr10:8073963 [GRCh38]
Chr10:8115926 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.885C>T (p.Asn295=) single nucleotide variant not provided [RCV003842999] Chr10:8064099 [GRCh38]
Chr10:8106062 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.78G>T (p.Thr26=) single nucleotide variant not provided [RCV003868341] Chr10:8055733 [GRCh38]
Chr10:8097696 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.241+12C>T single nucleotide variant not provided [RCV003865267] Chr10:8055908 [GRCh38]
Chr10:8097871 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.280C>T (p.Leu94=) single nucleotide variant not provided [RCV003737464] Chr10:8058343 [GRCh38]
Chr10:8100306 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1092C>T (p.Thr364=) single nucleotide variant not provided [RCV003677286] Chr10:8073780 [GRCh38]
Chr10:8115743 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.791G>A (p.Cys264Tyr) single nucleotide variant not provided [RCV003719633] Chr10:8064005 [GRCh38]
Chr10:8105968 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.562G>C (p.Val188Leu) single nucleotide variant not provided [RCV003730879] Chr10:8058625 [GRCh38]
Chr10:8100588 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.1199A>G (p.His400Arg) single nucleotide variant not provided [RCV003566187] Chr10:8073887 [GRCh38]
Chr10:8115850 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.384del (p.Leu130fs) deletion not provided [RCV003552191] Chr10:8058444 [GRCh38]
Chr10:8100407 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.849C>A (p.Tyr283Ter) single nucleotide variant not provided [RCV003564227] Chr10:8064063 [GRCh38]
Chr10:8106026 [GRCh37]
Chr10:10p14
pathogenic
NM_001002295.2(GATA3):c.307C>G (p.Leu103Val) single nucleotide variant not provided [RCV003734490] Chr10:8058370 [GRCh38]
Chr10:8100333 [GRCh37]
Chr10:10p14
uncertain significance
NM_001002295.2(GATA3):c.430_431delinsT (p.Gly144fs) indel GATA3-related condition [RCV003982547] Chr10:8058493..8058494 [GRCh38]
Chr10:8100456..8100457 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.821T>C (p.Leu274Pro) single nucleotide variant Hypoparathyroidism, deafness, renal disease syndrome [RCV003985126] Chr10:8064035 [GRCh38]
Chr10:8105998 [GRCh37]
Chr10:10p14
likely pathogenic
NM_001002295.2(GATA3):c.723C>G (p.Gly241=) single nucleotide variant GATA3-related condition [RCV003894641] Chr10:8058786 [GRCh38]
Chr10:8100749 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1134A>G (p.Lys378=) single nucleotide variant GATA3-related condition [RCV003983465] Chr10:8073822 [GRCh38]
Chr10:8115785 [GRCh37]
Chr10:10p14
likely benign
NM_001002295.2(GATA3):c.1019A>G (p.Asn340Ser) single nucleotide variant GATA3-related condition [RCV003899127] Chr10:8069567 [GRCh38]
Chr10:8111530 [GRCh37]
Chr10:10p14
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1188
Count of miRNA genes:666
Interacting mature miRNAs:730
Transcripts:ENST00000346208, ENST00000379328, ENST00000461472, ENST00000481743
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH78856  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,116,609 - 8,116,794UniSTSGRCh37
Build 36108,156,615 - 8,156,800RGDNCBI36
Celera108,041,984 - 8,042,169RGD
Cytogenetic Map10p15UniSTS
HuRef108,034,916 - 8,035,101UniSTS
GeneMap99-GB4 RH Map1071.55UniSTS
NCBI RH Map10171.8UniSTS
D10S2148  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,116,027 - 8,116,124UniSTSGRCh37
Build 36108,156,033 - 8,156,130RGDNCBI36
Celera108,041,401 - 8,041,498RGD
Cytogenetic Map10p15UniSTS
HuRef108,034,333 - 8,034,430UniSTS
Stanford-G3 RH Map10454.0UniSTS
NCBI RH Map10182.9UniSTS
GeneMap99-G3 RH Map10454.0UniSTS
G20258  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,116,286 - 8,116,395UniSTSGRCh37
Build 36108,156,292 - 8,156,401RGDNCBI36
Celera108,041,661 - 8,041,770RGD
Cytogenetic Map10p15UniSTS
HuRef108,034,593 - 8,034,702UniSTS
A005A11  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,116,286 - 8,116,395UniSTSGRCh37
Build 36108,156,292 - 8,156,401RGDNCBI36
Celera108,041,661 - 8,041,770RGD
Cytogenetic Map10p15UniSTS
HuRef108,034,593 - 8,034,702UniSTS
GeneMap99-GB4 RH Map1060.51UniSTS
NCBI RH Map10173.9UniSTS
GATA3_1519  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,115,702 - 8,116,589UniSTSGRCh37
Build 36108,155,708 - 8,156,595RGDNCBI36
Celera108,041,076 - 8,041,964RGD
HuRef108,034,008 - 8,034,896UniSTS
SHGC-34122  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,116,989 - 8,117,116UniSTSGRCh37
Build 36108,156,995 - 8,157,122RGDNCBI36
Celera108,042,364 - 8,042,491RGD
Cytogenetic Map10p15UniSTS
HuRef108,035,296 - 8,035,423UniSTS
GeneMap99-GB4 RH Map1071.94UniSTS
Whitehead-RH Map1063.1UniSTS
GeneMap99-G3 RH Map10412.0UniSTS
RH17471  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37108,116,990 - 8,117,116UniSTSGRCh37
Build 36108,156,996 - 8,157,122RGDNCBI36
Celera108,042,365 - 8,042,491RGD
Cytogenetic Map10p15UniSTS
HuRef108,035,297 - 8,035,423UniSTS
GeneMap99-GB4 RH Map1060.51UniSTS
NCBI RH Map10172.9UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 2
Medium 39 115 214 71 404 10 1381 15 155 220 378 245 67 68 707 5
Low 1613 2162 1395 438 1361 346 2196 1764 907 162 617 1291 96 1 1136 1402 2
Below cutoff 765 699 110 109 122 103 754 411 2400 31 453 45 9 672

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_015859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001002295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_002051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047425044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047425045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054365532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI024501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI686327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL390294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY497006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG287052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM152193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FB571433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FB571435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI179114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI179116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JC009146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT583933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC461691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M69106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X55037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X55122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X58072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X73519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000346208   ⟹   ENSP00000341619
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl108,054,810 - 8,074,890 (+)Ensembl
RefSeq Acc Id: ENST00000379328   ⟹   ENSP00000368632
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl108,054,688 - 8,075,198 (+)Ensembl
RefSeq Acc Id: ENST00000461472
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl108,058,399 - 8,074,064 (+)Ensembl
RefSeq Acc Id: ENST00000481743   ⟹   ENSP00000493486
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl108,053,604 - 8,058,494 (+)Ensembl
RefSeq Acc Id: ENST00000643001   ⟹   ENSP00000494284
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl108,045,378 - 8,055,896 (+)Ensembl
RefSeq Acc Id: NM_001002295   ⟹   NP_001002295
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,054,688 - 8,075,198 (+)NCBI
GRCh37108,087,294 - 8,117,164 (+)NCBI
Build 36108,136,673 - 8,157,170 (+)NCBI Archive
HuRef108,015,002 - 8,035,471 (+)ENTREZGENE
CHM1_1108,096,969 - 8,117,441 (+)NCBI
T2T-CHM13v2.0108,055,568 - 8,076,094 (+)NCBI
Sequence:
RefSeq Acc Id: NM_002051   ⟹   NP_002042
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,054,688 - 8,075,198 (+)NCBI
GRCh37108,087,294 - 8,117,164 (+)NCBI
Build 36108,136,673 - 8,157,170 (+)NCBI Archive
HuRef108,015,002 - 8,035,471 (+)ENTREZGENE
CHM1_1108,096,969 - 8,117,441 (+)NCBI
T2T-CHM13v2.0108,055,568 - 8,076,094 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252442   ⟹   XP_005252499
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,051,236 - 8,075,198 (+)NCBI
GRCh37108,087,294 - 8,117,164 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252443   ⟹   XP_005252500
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,045,333 - 8,075,198 (+)NCBI
GRCh37108,087,294 - 8,117,164 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047425044   ⟹   XP_047281000
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,051,236 - 8,075,198 (+)NCBI
RefSeq Acc Id: XM_047425045   ⟹   XP_047281001
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,045,333 - 8,075,198 (+)NCBI
RefSeq Acc Id: XM_054365528   ⟹   XP_054221503
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0108,046,417 - 8,076,094 (+)NCBI
RefSeq Acc Id: XM_054365529   ⟹   XP_054221504
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0108,054,458 - 8,076,094 (+)NCBI
RefSeq Acc Id: XM_054365530   ⟹   XP_054221505
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0108,046,006 - 8,076,094 (+)NCBI
RefSeq Acc Id: XM_054365531   ⟹   XP_054221506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0108,054,458 - 8,076,094 (+)NCBI
RefSeq Acc Id: XM_054365532   ⟹   XP_054221507
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0108,046,004 - 8,076,094 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001002295 (Get FASTA)   NCBI Sequence Viewer  
  NP_002042 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252499 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252500 (Get FASTA)   NCBI Sequence Viewer  
  XP_047281000 (Get FASTA)   NCBI Sequence Viewer  
  XP_047281001 (Get FASTA)   NCBI Sequence Viewer  
  XP_054221503 (Get FASTA)   NCBI Sequence Viewer  
  XP_054221504 (Get FASTA)   NCBI Sequence Viewer  
  XP_054221505 (Get FASTA)   NCBI Sequence Viewer  
  XP_054221506 (Get FASTA)   NCBI Sequence Viewer  
  XP_054221507 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA35870 (Get FASTA)   NCBI Sequence Viewer  
  AAH03070 (Get FASTA)   NCBI Sequence Viewer  
  AAH06793 (Get FASTA)   NCBI Sequence Viewer  
  AAR32096 (Get FASTA)   NCBI Sequence Viewer  
  BAG60483 (Get FASTA)   NCBI Sequence Viewer  
  CAA38877 (Get FASTA)   NCBI Sequence Viewer  
  CAA38916 (Get FASTA)   NCBI Sequence Viewer  
  CAA41102 (Get FASTA)   NCBI Sequence Viewer  
  CAR95134 (Get FASTA)   NCBI Sequence Viewer  
  CAR95135 (Get FASTA)   NCBI Sequence Viewer  
  CBX53865 (Get FASTA)   NCBI Sequence Viewer  
  CBX53866 (Get FASTA)   NCBI Sequence Viewer  
  CDL93507 (Get FASTA)   NCBI Sequence Viewer  
  EAW86367 (Get FASTA)   NCBI Sequence Viewer  
  EAW86368 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000341619
  ENSP00000341619.3
  ENSP00000368632
  ENSP00000368632.3
  ENSP00000493486.1
  ENSP00000494284.1
  ENSP00000515407.1
GenBank Protein P23771 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001002295   ⟸   NM_001002295
- Peptide Label: isoform 1
- UniProtKB: P23771 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_002042   ⟸   NM_002051
- Peptide Label: isoform 2
- UniProtKB: Q5VWG8 (UniProtKB/Swiss-Prot),   Q5VWG7 (UniProtKB/Swiss-Prot),   Q96J16 (UniProtKB/Swiss-Prot),   P23771 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005252500   ⟸   XM_005252443
- Peptide Label: isoform X1
- UniProtKB: P23771 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005252499   ⟸   XM_005252442
- Peptide Label: isoform X1
- UniProtKB: P23771 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000341619   ⟸   ENST00000346208
RefSeq Acc Id: ENSP00000493486   ⟸   ENST00000481743
RefSeq Acc Id: ENSP00000368632   ⟸   ENST00000379328
RefSeq Acc Id: ENSP00000494284   ⟸   ENST00000643001
RefSeq Acc Id: XP_047281001   ⟸   XM_047425045
- Peptide Label: isoform X2
- UniProtKB: Q5VWG8 (UniProtKB/Swiss-Prot),   Q5VWG7 (UniProtKB/Swiss-Prot),   P23771 (UniProtKB/Swiss-Prot),   Q96J16 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047281000   ⟸   XM_047425044
- Peptide Label: isoform X2
- UniProtKB: Q5VWG8 (UniProtKB/Swiss-Prot),   Q5VWG7 (UniProtKB/Swiss-Prot),   P23771 (UniProtKB/Swiss-Prot),   Q96J16 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054221507   ⟸   XM_054365532
- Peptide Label: isoform X2
- UniProtKB: Q96J16 (UniProtKB/Swiss-Prot),   Q5VWG8 (UniProtKB/Swiss-Prot),   Q5VWG7 (UniProtKB/Swiss-Prot),   P23771 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054221505   ⟸   XM_054365530
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054221503   ⟸   XM_054365528
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054221504   ⟸   XM_054365529
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054221506   ⟸   XM_054365531
- Peptide Label: isoform X2
- UniProtKB: Q96J16 (UniProtKB/Swiss-Prot),   Q5VWG8 (UniProtKB/Swiss-Prot),   Q5VWG7 (UniProtKB/Swiss-Prot),   P23771 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P23771-F1-model_v2 AlphaFold P23771 1-443 view protein structure

Promoters
RGD ID:7216955
Promoter ID:EPDNEW_H14223
Type:initiation region
Name:GATA3_3
Description:GATA binding protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14224  EPDNEW_H14225  EPDNEW_H14226  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,045,333 - 8,045,393EPDNEW
RGD ID:7216957
Promoter ID:EPDNEW_H14224
Type:initiation region
Name:GATA3_1
Description:GATA binding protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14223  EPDNEW_H14225  EPDNEW_H14226  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,054,688 - 8,054,748EPDNEW
RGD ID:7216959
Promoter ID:EPDNEW_H14225
Type:initiation region
Name:GATA3_2
Description:GATA binding protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14223  EPDNEW_H14224  EPDNEW_H14226  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,054,817 - 8,054,877EPDNEW
RGD ID:7216961
Promoter ID:EPDNEW_H14226
Type:initiation region
Name:GATA3_4
Description:GATA binding protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14223  EPDNEW_H14224  EPDNEW_H14225  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38108,055,366 - 8,055,426EPDNEW
RGD ID:6787734
Promoter ID:HG_KWN:8540
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   Lymphoblastoid
Transcripts:NR_024255,   NR_024256,   OTTHUMT00000046720,   OTTHUMT00000046722,   OTTHUMT00000046723,   OTTHUMT00000346865,   OTTHUMT00000346866
Position:
Human AssemblyChrPosition (strand)Source
Build 36108,133,916 - 8,135,747 (-)MPROMDB
RGD ID:6787721
Promoter ID:HG_KWN:8541
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   Jurkat,   Lymphoblastoid
Transcripts:NM_002051,   OTTHUMT00000046718
Position:
Human AssemblyChrPosition (strand)Source
Build 36108,135,781 - 8,137,122 (+)MPROMDB
RGD ID:6814487
Promoter ID:HG_XEF:835
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Lymphoblastoid
Transcripts:NM_001004967,   NM_001008444,   NM_001044567,   NM_001076804,   NM_001090866,   NM_001104718,   NM_001171800,   NM_131211,   NM_133293
Position:
Human AssemblyChrPosition (strand)Source
Build 36108,137,171 - 8,137,857 (+)MPROMDB
RGD ID:6787722
Promoter ID:HG_KWN:8542
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:OTTHUMT00000046721
Position:
Human AssemblyChrPosition (strand)Source
Build 36108,140,196 - 8,140,696 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:4172 AgrOrtholog
COSMIC GATA3 COSMIC
Ensembl Genes ENSG00000107485 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000346208 ENTREZGENE
  ENST00000346208.4 UniProtKB/Swiss-Prot
  ENST00000379328 ENTREZGENE
  ENST00000379328.9 UniProtKB/Swiss-Prot
  ENST00000461472.1 UniProtKB/TrEMBL
  ENST00000481743.2 UniProtKB/TrEMBL
  ENST00000643001.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.50.10 UniProtKB/Swiss-Prot
GTEx ENSG00000107485 GTEx
HGNC ID HGNC:4172 ENTREZGENE
Human Proteome Map GATA3 Human Proteome Map
InterPro TF_GATA-2/3 UniProtKB/Swiss-Prot
  Transcription_factor_GATA UniProtKB/Swiss-Prot
  Znf_GATA UniProtKB/Swiss-Prot
  Znf_NHR/GATA UniProtKB/Swiss-Prot
KEGG Report hsa:2625 UniProtKB/Swiss-Prot
NCBI Gene 2625 ENTREZGENE
OMIM 131320 OMIM
PANTHER PTHR10071 UniProtKB/Swiss-Prot
  PTHR10071:SF106 UniProtKB/Swiss-Prot
Pfam GATA UniProtKB/Swiss-Prot
PharmGKB PA28586 PharmGKB
PIRSF TF_GATA-1/2/3 UniProtKB/Swiss-Prot
PRINTS GATAZNFINGER UniProtKB/Swiss-Prot
PROSITE GATA_ZN_FINGER_1 UniProtKB/Swiss-Prot
  GATA_ZN_FINGER_2 UniProtKB/Swiss-Prot
SMART ZnF_GATA UniProtKB/Swiss-Prot
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot
UniProt A0A2R8Y2A9_HUMAN UniProtKB/TrEMBL
  A0A2R8Y4T2_HUMAN UniProtKB/TrEMBL
  A0A994J6H6_HUMAN UniProtKB/TrEMBL
  GATA3_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q5VWG7 ENTREZGENE
  Q5VWG8 ENTREZGENE
  Q96J16 ENTREZGENE
UniProt Secondary Q5VWG7 UniProtKB/Swiss-Prot
  Q5VWG8 UniProtKB/Swiss-Prot
  Q96J16 UniProtKB/Swiss-Prot