TNNI1 (troponin I1, slow skeletal type) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: TNNI1 (troponin I1, slow skeletal type) Homo sapiens
Analyze
Symbol: TNNI1
Name: troponin I1, slow skeletal type
RGD ID: 732918
HGNC Page HGNC:11945
Description: Predicted to enable actin binding activity. Predicted to be involved in cardiac muscle contraction and skeletal muscle contraction. Predicted to act upstream of or within transition between fast and slow fiber and ventricular cardiac muscle tissue morphogenesis. Predicted to be located in cytosol. Predicted to be part of troponin complex.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DKFZp451O223; SSTNI; TNN1; troponin I type 1 (skeletal, slow); troponin i, slow isoform; troponin I, slow skeletal muscle; troponin I, slow-twitch isoform
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381201,403,784 - 201,421,730 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1201,403,784 - 201,429,866 (-)EnsemblGRCh38hg38GRCh38
GRCh371201,372,912 - 201,390,858 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361199,639,518 - 199,657,497 (-)NCBINCBI36Build 36hg18NCBI36
Build 341198,104,552 - 198,122,531NCBI
Celera1174,496,762 - 174,514,748 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1172,538,919 - 172,556,905 (-)NCBIHuRef
CHM1_11202,795,059 - 202,813,037 (-)NCBICHM1_1
T2T-CHM13v2.01200,661,585 - 200,679,520 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (TAS)
troponin complex  (IBA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (EXP)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (EXP)
amiodarone pharmacodynamics pathway  (EXP)
amlodipine pharmacodynamics pathway  (EXP)
atenolol pharmacodynamics pathway  (EXP)
betaxolol pharmacodynamics pathway  (EXP)
bisoprolol pharmacodynamics pathway  (EXP)
bupranolol drug pathway  (EXP)
bupranolol pharmacodynamics pathway  (EXP)
carvedilol pharmacodynamics pathway  (EXP)
diltiazem pharmacodynamics pathway  (EXP)
disopyramide pharmacodynamics pathway  (EXP)
dobutamine pharmacodynamics pathway  (EXP)
esmolol pharmacodynamics pathway  (EXP)
flecainde pharmacodynamics pathway  (EXP)
fosphenytoin pharmacodynamics pathway  (EXP)
ibutilide pharmacodynamics pathway  (EXP)
isoprenaline pharmacodynamics pathway  (EXP)
isradipine pharmacodynamics pathway  (EXP)
levobunolol pharmacodynamics pathway  (EXP)
lidocaine pharmacodynamics pathway  (EXP)
metoprolol pharmacodynamics pathway  (EXP)
mexiletine pharmacodynamics pathway  (EXP)
nadolol pharmacodynamics pathway  (EXP)
nebivolol pharmacodynamics pathway  (EXP)
nifedipine pharmacodynamics pathway  (EXP)
nimodipine pharmacodynamics pathway  (EXP)
nisoldipine pharmacodynamics pathway  (EXP)
nitrendipine pharmacodynamics pathway  (EXP)
penbutolol pharmacodynamics pathway  (EXP)
phenytoin pharmacodynamics pathway  (EXP)
pindolol pharmacodynamics pathway  (EXP)
procainamide pharmacodynamics pathway  (EXP)
propranolol pharmacodynamics pathway  (EXP)
quinidine pharmacodynamics pathway  (EXP)
sotalol pharmacodynamics pathway  (EXP)
timolol pharmacodynamics pathway  (EXP)
verapamil pharmacodynamics pathway  (EXP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1934363   PMID:1959627   PMID:2341402   PMID:2365354   PMID:8125298   PMID:8144655   PMID:9016781   PMID:9724539   PMID:11076863   PMID:11230166   PMID:12044157   PMID:12477932  
PMID:12809519   PMID:12815045   PMID:12857748   PMID:14702039   PMID:15289369   PMID:15489334   PMID:15489336   PMID:15542288   PMID:16005017   PMID:16189514   PMID:16381901   PMID:17051347  
PMID:17099250   PMID:18092822   PMID:18157088   PMID:19811558   PMID:20817590   PMID:21873635   PMID:21988832   PMID:22323298   PMID:22374183   PMID:25416956   PMID:25996354   PMID:26334851  
PMID:26344197   PMID:26972631   PMID:27524214   PMID:28585121   PMID:28718245   PMID:29872149   PMID:30453890   PMID:32296183   PMID:32539541   PMID:33158499   PMID:33683712   PMID:38569017  


Genomics

Comparative Map Data
TNNI1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381201,403,784 - 201,421,730 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1201,403,784 - 201,429,866 (-)EnsemblGRCh38hg38GRCh38
GRCh371201,372,912 - 201,390,858 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361199,639,518 - 199,657,497 (-)NCBINCBI36Build 36hg18NCBI36
Build 341198,104,552 - 198,122,531NCBI
Celera1174,496,762 - 174,514,748 (-)NCBICelera
Cytogenetic Map1q32.1NCBI
HuRef1172,538,919 - 172,556,905 (-)NCBIHuRef
CHM1_11202,795,059 - 202,813,037 (-)NCBICHM1_1
T2T-CHM13v2.01200,661,585 - 200,679,520 (-)NCBIT2T-CHM13v2.0
Tnni1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391135,709,252 - 135,738,727 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1135,707,172 - 135,738,727 (+)EnsemblGRCm39 Ensembl
GRCm381135,783,033 - 135,810,989 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1135,779,434 - 135,810,989 (+)EnsemblGRCm38mm10GRCm38
MGSCv371137,695,998 - 137,707,566 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361137,616,244 - 137,627,387 (+)NCBIMGSCv36mm8
Celera1138,433,849 - 138,445,388 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map159.28NCBI
Tnni1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81349,781,529 - 49,793,385 (+)NCBIGRCr8
mRatBN7.21347,229,217 - 47,241,640 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1347,229,216 - 47,241,644 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1349,837,958 - 49,848,647 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01351,126,025 - 51,136,714 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01348,389,874 - 48,400,620 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01352,624,856 - 52,637,297 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1352,624,878 - 52,637,297 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01357,672,816 - 57,685,255 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41348,830,442 - 48,841,258 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11348,844,484 - 48,855,301 (+)NCBI
Celera1347,546,945 - 47,557,674 (+)NCBICelera
Cytogenetic Map13q13NCBI
Tnni1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540637,534,453 - 37,554,868 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540637,535,397 - 37,554,868 (-)NCBIChiLan1.0ChiLan1.0
TNNI1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2147,962,860 - 47,974,464 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1147,924,558 - 47,937,485 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01177,006,262 - 177,054,525 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11181,308,154 - 181,329,486 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1181,309,609 - 181,314,889 (-)Ensemblpanpan1.1panPan2
TNNI1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.171,647,138 - 1,658,648 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl71,647,377 - 1,658,724 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha71,521,941 - 1,533,380 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.071,478,422 - 1,490,139 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl71,482,036 - 1,489,861 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.171,466,030 - 1,477,462 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.071,545,747 - 1,585,433 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.071,598,424 - 1,609,860 (+)NCBIUU_Cfam_GSD_1.0
Tnni1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934473,761,666 - 73,790,461 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365673,013,342 - 3,025,171 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365673,013,359 - 3,025,137 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNNI1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1023,788,279 - 23,804,119 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11023,788,279 - 23,800,554 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21028,197,736 - 28,209,608 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TNNI1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12527,989,743 - 28,009,234 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2527,997,709 - 28,002,646 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605528,788,564 - 28,801,513 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tnni1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248079,294,951 - 9,308,446 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248079,295,121 - 9,306,368 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TNNI1
5 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q32.1(chr1:201226425-202014204)x3 copy number gain See cases [RCV000051558] Chr1:201226425..202014204 [GRCh38]
Chr1:201195553..201983332 [GRCh37]
Chr1:199462176..200249955 [NCBI36]
Chr1:1q32.1		 uncertain significance
GRCh38/hg38 1q31.1-42.11(chr1:187143981-224299417)x3 copy number gain See cases [RCV000051857] Chr1:187143981..224299417 [GRCh38]
Chr1:187113113..224487119 [GRCh37]
Chr1:185379736..222553742 [NCBI36]
Chr1:1q31.1-42.11		 pathogenic
GRCh38/hg38 1q32.1(chr1:200144603-203112078)x1 copy number loss See cases [RCV000133625] Chr1:200144603..203112078 [GRCh38]
Chr1:200113731..203081206 [GRCh37]
Chr1:198380354..201347829 [NCBI36]
Chr1:1q32.1		 pathogenic
GRCh37/hg19 1q31.3-42.13(chr1:197811907-228997888)x3 copy number gain See cases [RCV000240137] Chr1:197811907..228997888 [GRCh37]
Chr1:1q31.3-42.13		 pathogenic
GRCh37/hg19 1q31.3-44(chr1:195483439-249213000)x3 copy number gain See cases [RCV000449172] Chr1:195483439..249213000 [GRCh37]
Chr1:1q31.3-44		 pathogenic
GRCh37/hg19 1q25.2-32.1(chr1:179413479-201764737)x1 copy number loss See cases [RCV000445748] Chr1:179413479..201764737 [GRCh37]
Chr1:1q25.2-32.1		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q32.1(chr1:200873507-201947585)x3 copy number gain not provided [RCV000684686] Chr1:200873507..201947585 [GRCh37]
Chr1:1q32.1		 uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q25.3-41(chr1:185644663-221698833)x3 copy number gain not provided [RCV000749265] Chr1:185644663..221698833 [GRCh37]
Chr1:1q25.3-41		 pathogenic
GRCh37/hg19 1q25.3-44(chr1:182388773-249111240)x3 copy number gain not provided [RCV000845852] Chr1:182388773..249111240 [GRCh37]
Chr1:1q25.3-44		 pathogenic
GRCh37/hg19 1q31.3-32.2(chr1:194356425-210988710)x3 copy number gain not provided [RCV001249273] Chr1:194356425..210988710 [GRCh37]
Chr1:1q31.3-32.2		 not provided
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44		 uncertain significance
GRCh37/hg19 1q25.2-32.1(chr1:179413479-201764737) copy number loss not specified [RCV002053780] Chr1:179413479..201764737 [GRCh37]
Chr1:1q25.2-32.1		 pathogenic
NC_000001.10:g.(?_200522516)_(206945780_?)dup duplication Epilepsy, familial adult myoclonic, 5 [RCV003116306] Chr1:200522516..206945780 [GRCh37]
Chr1:1q32.1		 uncertain significance
NC_000001.10:g.(?_200522516)_(208391267_?)dup duplication Hypokalemic periodic paralysis, type 1 [RCV003119239]|not provided [RCV003119240] Chr1:200522516..208391267 [GRCh37]
Chr1:1q32.1-32.2		 uncertain significance|no classifications from unflagged records
GRCh37/hg19 1q31.3-44(chr1:197867914-249224684)x3 copy number gain See cases [RCV002287837] Chr1:197867914..249224684 [GRCh37]
Chr1:1q31.3-44		 pathogenic
NM_003281.4(TNNI1):c.142C>T (p.Arg48Cys) single nucleotide variant Inborn genetic diseases [RCV002771981] Chr1:201414565 [GRCh38]
Chr1:201383693 [GRCh37]
Chr1:1q32.1		 uncertain significance
GRCh37/hg19 1q25.3-32.3(chr1:181453460-213107248)x3 copy number gain not provided [RCV002475637] Chr1:181453460..213107248 [GRCh37]
Chr1:1q25.3-32.3		 pathogenic
NM_003281.4(TNNI1):c.13G>A (p.Glu5Lys) single nucleotide variant Inborn genetic diseases [RCV002682672] Chr1:201417118 [GRCh38]
Chr1:201386246 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_003281.4(TNNI1):c.248T>C (p.Ile83Thr) single nucleotide variant Inborn genetic diseases [RCV002835616] Chr1:201413063 [GRCh38]
Chr1:201382191 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_003281.4(TNNI1):c.143G>A (p.Arg48His) single nucleotide variant Inborn genetic diseases [RCV002724820] Chr1:201414564 [GRCh38]
Chr1:201383692 [GRCh37]
Chr1:1q32.1		 uncertain significance
NM_003281.4(TNNI1):c.40C>T (p.Arg14Cys) single nucleotide variant TNNI1-related congenital myopathy [RCV003333902] Chr1:201415230 [GRCh38]
Chr1:201384358 [GRCh37]
Chr1:1q32.1		 uncertain significance
GRCh37/hg19 1q31.3-32.1(chr1:197216705-203683110)x1 copy number loss not specified [RCV003986384] Chr1:197216705..203683110 [GRCh37]
Chr1:1q31.3-32.1		 likely pathogenic
GRCh37/hg19 1q32.1(chr1:199373229-204335027)x3 copy number gain not specified [RCV003986684] Chr1:199373229..204335027 [GRCh37]
Chr1:1q32.1		 likely pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4478
Count of miRNA genes:1222
Interacting mature miRNAs:1573
Transcripts:ENST00000336092, ENST00000361379, ENST00000367312, ENST00000555340, ENST00000555948, ENST00000556362
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D1S1723  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,390,888 - 201,391,058UniSTSGRCh37
Build 361199,657,511 - 199,657,681RGDNCBI36
Celera1174,514,762 - 174,514,932RGD
Cytogenetic Map1q31.3UniSTS
HuRef1172,556,919 - 172,557,092UniSTS
Marshfield Genetic Map1215.17RGD
Marshfield Genetic Map1215.17UniSTS
Genethon Genetic Map1219.2UniSTS
TNG Radiation Hybrid Map198459.0UniSTS
Whitehead-YAC Contig Map1 UniSTS
RH41799  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,373,648 - 201,373,792UniSTSGRCh37
Build 361199,640,271 - 199,640,415RGDNCBI36
Celera1174,497,515 - 174,497,659RGD
Cytogenetic Map1q31.3UniSTS
HuRef1172,539,672 - 172,539,816UniSTS
GeneMap99-GB4 RH Map1665.31UniSTS
NCBI RH Map11662.0UniSTS
D1S2034E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,378,014 - 201,378,250UniSTSGRCh37
Build 361199,644,637 - 199,644,873RGDNCBI36
Celera1174,501,881 - 174,502,117RGD
Cytogenetic Map1q31.3UniSTS
HuRef1172,544,038 - 172,544,274UniSTS
TNG Radiation Hybrid Map198473.0UniSTS
GeneMap99-GB4 RH Map1667.12UniSTS
GeneMap99-GB4 RH Map1667.19UniSTS
NCBI RH Map11686.4UniSTS
NCBI RH Map11687.7UniSTS
SHGC-52392  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,373,754 - 201,373,861UniSTSGRCh37
Build 361199,640,377 - 199,640,484RGDNCBI36
Celera1174,497,621 - 174,497,728RGD
Cytogenetic Map1q31.3UniSTS
HuRef1172,539,778 - 172,539,885UniSTS
TNG Radiation Hybrid Map198469.0UniSTS
GeneMap99-G3 RH Map17708.0UniSTS
RH64709  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,374,573 - 201,374,652UniSTSGRCh37
Build 361199,641,196 - 199,641,275RGDNCBI36
Celera1174,498,440 - 174,498,519RGD
Cytogenetic Map1q31.3UniSTS
HuRef1172,540,597 - 172,540,676UniSTS
GeneMap99-GB4 RH Map1665.11UniSTS
NCBI RH Map11662.0UniSTS
SHGC-76130  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,379,158 - 201,379,293UniSTSGRCh37
Build 361199,645,781 - 199,645,916RGDNCBI36
Celera1174,503,025 - 174,503,160RGD
Cytogenetic Map1q31.3UniSTS
HuRef1172,545,182 - 172,545,317UniSTS
TNG Radiation Hybrid Map198473.0UniSTS
GeneMap99-GB4 RH Map1666.41UniSTS
NCBI RH Map11679.7UniSTS
TNNI1_3874  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,378,888 - 201,379,419UniSTSGRCh37
Build 361199,645,511 - 199,646,042RGDNCBI36
Celera1174,502,755 - 174,503,286RGD
HuRef1172,544,912 - 172,545,443UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS
TNNI1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371201,379,523 - 201,380,651UniSTSGRCh37
Celera1174,503,390 - 174,504,518UniSTS
HuRef1172,545,547 - 172,546,675UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High 1 269 274 269
Medium 10 288 7 28 29 1 549 564 10 22 43 8 27 4 544
Low 851 806 716 441 392 340 2057 374 695 210 583 812 109 134 1279
Below cutoff 1507 1797 915 113 1177 79 1407 927 2722 100 780 707 37 1 1041 695 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_016649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC096677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ315823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK123965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL831820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL831975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL832006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI825503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX510903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR450301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR541996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR542030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J04760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000336092   ⟹   ENSP00000337022
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,408,864 - 201,429,866 (-)Ensembl
RefSeq Acc Id: ENST00000361379   ⟹   ENSP00000354488
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,403,784 - 201,421,730 (-)Ensembl
RefSeq Acc Id: ENST00000367312   ⟹   ENSP00000356281
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,409,857 - 201,421,718 (-)Ensembl
RefSeq Acc Id: ENST00000555340   ⟹   ENSP00000451660
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,411,357 - 201,421,726 (-)Ensembl
RefSeq Acc Id: ENST00000555948   ⟹   ENSP00000451307
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,409,067 - 201,422,021 (-)Ensembl
RefSeq Acc Id: ENST00000556362   ⟹   ENSP00000451776
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,411,402 - 201,422,167 (-)Ensembl
RefSeq Acc Id: ENST00000622580   ⟹   ENSP00000477578
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1201,403,768 - 201,421,746 (-)Ensembl
RefSeq Acc Id: NM_003281   ⟹   NP_003272
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381201,403,784 - 201,421,730 (-)NCBI
GRCh371201,372,895 - 201,390,874 (-)ENTREZGENE
Build 361199,639,518 - 199,657,497 (-)NCBI Archive
HuRef1172,538,919 - 172,556,905 (-)ENTREZGENE
CHM1_11202,795,059 - 202,813,037 (-)NCBI
T2T-CHM13v2.01200,661,585 - 200,679,520 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_003272   ⟸   NM_003281
- UniProtKB: Q86T57 (UniProtKB/Swiss-Prot),   Q6ICU2 (UniProtKB/Swiss-Prot),   Q6FGW1 (UniProtKB/Swiss-Prot),   Q6FGS7 (UniProtKB/Swiss-Prot),   Q659A5 (UniProtKB/Swiss-Prot),   A8MSJ0 (UniProtKB/Swiss-Prot),   A6NEH3 (UniProtKB/Swiss-Prot),   Q96DT9 (UniProtKB/Swiss-Prot),   P19237 (UniProtKB/Swiss-Prot),   B3KW26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000451307   ⟸   ENST00000555948
RefSeq Acc Id: ENSP00000451660   ⟸   ENST00000555340
RefSeq Acc Id: ENSP00000451776   ⟸   ENST00000556362
RefSeq Acc Id: ENSP00000477578   ⟸   ENST00000622580
RefSeq Acc Id: ENSP00000354488   ⟸   ENST00000361379
RefSeq Acc Id: ENSP00000337022   ⟸   ENST00000336092
RefSeq Acc Id: ENSP00000356281   ⟸   ENST00000367312

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P19237-F1-model_v2 AlphaFold P19237 1-187 view protein structure

Promoters
RGD ID:6849482
Promoter ID:EP48007
Type:multiple initiation site
Name:HS_TNNI1
Description:Troponin I.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Nuclease protection; Sequencing of a full-length cDNA; Primer extension with homologous sequence ladder; NEDO full length human cDNA sequencing project.; Oligo-capping
Regulation:sk (repressed by or weakly expressed in) m.(slow twitch fib.), fetal card (repressed by or weakly expressed in) m.
Position:
Human AssemblyChrPosition (strand)Source
Build 361199,657,481 - 199,657,541EPD
RGD ID:6858538
Promoter ID:EPDNEW_H2434
Type:initiation region
Name:TNNI1_1
Description:troponin I1, slow skeletal type
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2436  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381201,421,730 - 201,421,790EPDNEW
RGD ID:6858542
Promoter ID:EPDNEW_H2436
Type:initiation region
Name:TNNI1_2
Description:troponin I1, slow skeletal type
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2434  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381201,429,866 - 201,429,926EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:11945 AgrOrtholog
COSMIC TNNI1 COSMIC
Ensembl Genes ENSG00000159173 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000336092.8 UniProtKB/Swiss-Prot
  ENST00000361379 ENTREZGENE
  ENST00000361379.9 UniProtKB/Swiss-Prot
  ENST00000367312.5 UniProtKB/Swiss-Prot
  ENST00000555340.6 UniProtKB/TrEMBL
  ENST00000555948.5 UniProtKB/TrEMBL
  ENST00000556362.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.250.180 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000159173 GTEx
HGNC ID HGNC:11945 ENTREZGENE
Human Proteome Map TNNI1 Human Proteome Map
InterPro Troponin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Troponin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:7135 UniProtKB/Swiss-Prot
NCBI Gene 7135 ENTREZGENE
OMIM 191042 OMIM
PANTHER TROPONIN I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TROPONIN I, SLOW SKELETAL MUSCLE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Troponin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA36634 PharmGKB
Superfamily-SCOP SSF90250 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6NEH3 ENTREZGENE
  A8MSJ0 ENTREZGENE
  B3KW26 ENTREZGENE, UniProtKB/TrEMBL
  G3V3L5_HUMAN UniProtKB/TrEMBL
  G3V489_HUMAN UniProtKB/TrEMBL
  G3V4F8_HUMAN UniProtKB/TrEMBL
  P19237 ENTREZGENE
  Q659A5 ENTREZGENE
  Q6FGS7 ENTREZGENE
  Q6FGW1 ENTREZGENE
  Q6ICU2 ENTREZGENE
  Q86T57 ENTREZGENE
  Q96DT9 ENTREZGENE
  TNNI1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A6NEH3 UniProtKB/Swiss-Prot
  A8MSJ0 UniProtKB/Swiss-Prot
  Q659A5 UniProtKB/Swiss-Prot
  Q6FGS7 UniProtKB/Swiss-Prot
  Q6FGW1 UniProtKB/Swiss-Prot
  Q6ICU2 UniProtKB/Swiss-Prot
  Q86T57 UniProtKB/Swiss-Prot
  Q96DT9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-23 TNNI1  troponin I1, slow skeletal type  TNNI1  troponin I type 1 (skeletal, slow)  Symbol and/or name change 5135510 APPROVED