Scnn1g (sodium channel, nonvoltage-gated 1 gamma) - Rat Genome Database

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Gene: Scnn1g (sodium channel, nonvoltage-gated 1 gamma) Mus musculus
Analyze
Symbol: Scnn1g
Name: sodium channel, nonvoltage-gated 1 gamma
RGD ID: 732848
MGI Page MGI
Description: Enables WW domain binding activity and ligand-gated sodium channel activity. Contributes to sodium channel activity. Involved in intracellular sodium ion homeostasis and sodium ion import across plasma membrane. Acts upstream of or within cellular response to aldosterone and sodium ion transmembrane transport. Located in external side of plasma membrane. Part of sodium channel complex. Is expressed in several structures, including bladder fundus; lung; metanephros; pharyngo-tympanic tube; and ureter. Used to study autosomal recessive pseudohypoaldosteronism type 1. Human ortholog(s) of this gene implicated in Liddle syndrome; bronchiectasis 3; and pseudohypoaldosteronism. Orthologous to human SCNN1G (sodium channel epithelial 1 subunit gamma).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: [g]ENaC; amiloride-sensitive sodium channel subunit gamma; ENaC gamma; epithelial Na(+) channel subunit gamma; gamma-ENaC; gamma-NaCH; nonvoltage-gated sodium channel 1 subunit gamma; SCNEG
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397121,333,643 - 121,367,705 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7121,333,702 - 121,367,698 (+)EnsemblGRCm39 Ensembl
GRCm387121,734,420 - 121,768,482 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7121,734,479 - 121,768,475 (+)EnsemblGRCm38mm10GRCm38
MGSCv377128,878,021 - 128,911,991 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367121,525,655 - 121,559,625 (+)NCBIMGSCv36mm8
Celera7121,627,304 - 121,655,746 (+)NCBICelera
Cytogenetic Map7F2NCBI
cM Map765.07NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
17beta-estradiol  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (ISO)
8-(4-chlorophenylthio)-cAMP  (ISO)
8-(4-chlorophenylthio)-cGMP  (ISO)
acetylleucyl-leucyl-norleucinal  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
aldosterone  (ISO)
all-trans-retinoic acid  (ISO)
amiloride  (EXP,ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
brefeldin A  (ISO)
CGP 52608  (ISO)
cisplatin  (ISO)
cortisol  (ISO)
crocidolite asbestos  (EXP)
desmopressin  (ISO)
dexamethasone  (ISO)
dichloroacetic acid  (EXP)
dioxygen  (ISO)
dobutamine  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
fulvestrant  (ISO)
gentamycin  (ISO)
iodide salt  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
manganese(II) chloride  (ISO)
mercury dichloride  (ISO)
methimazole  (ISO)
methoxychlor  (ISO)
N-ethyl-N-nitrosourea  (EXP)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
nitrates  (ISO)
nitrofen  (ISO)
ozone  (ISO)
panobinostat  (ISO)
paraquat  (ISO)
perfluorohexanesulfonic acid  (EXP)
phenethyl caffeate  (ISO)
pioglitazone  (EXP)
pirinixic acid  (EXP,ISO)
potassium atom  (ISO)
progesterone  (ISO)
quercetin  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium atom  (EXP,ISO)
sodium chloride  (EXP)
sodium fluoride  (EXP)
sulfadimethoxine  (ISO)
terbutaline  (ISO)
testosterone  (EXP)
tetrachloromethane  (ISO)
thiourea  (ISO)
titanium dioxide  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Hypertension caused by a truncated epithelial sodium channel gamma subunit: genetic heterogeneity of Liddle syndrome. Hansson JH, etal., Nat Genet 1995 Sep;11(1):76-82.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Mouse chromosomal location of three epithelial sodium channel subunit genes and an apical sodium chloride cotransporter gene. Pathak BG, etal., Genomics 1996 Apr 1;33(1):124-7.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. A novel splice-site mutation in the gamma subunit of the epithelial sodium channel gene in three pseudohypoaldosteronism type 1 families. Strautnieks SS, etal., Nat Genet. 1996 Jun;13(2):248-50.
Additional References at PubMed
PMID:8107805   PMID:8575777   PMID:8589728   PMID:9788978   PMID:9990093   PMID:10212229   PMID:10232677   PMID:10349636   PMID:10405217   PMID:10409305   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:11244092   PMID:11773602   PMID:12118100   PMID:12176733   PMID:12393794   PMID:12424229   PMID:12477932   PMID:12576470   PMID:12770839   PMID:12876281   PMID:12897071  
PMID:15007064   PMID:15007080   PMID:15096495   PMID:15123669   PMID:15166222   PMID:15261163   PMID:15489334   PMID:15747579   PMID:15914781   PMID:16007095   PMID:16141072   PMID:16141073  
PMID:16319116   PMID:16407190   PMID:16602821   PMID:16849693   PMID:16941024   PMID:16985003   PMID:17199078   PMID:17438133   PMID:17510235   PMID:17513453   PMID:17522058   PMID:17715136  
PMID:17967898   PMID:18006588   PMID:18086683   PMID:18385268   PMID:18981174   PMID:18981175   PMID:18981180   PMID:19036848   PMID:19144862   PMID:19158091   PMID:19322198   PMID:20427473  
PMID:20453031   PMID:20504903   PMID:21267068   PMID:21413931   PMID:21624334   PMID:21677750   PMID:21873635   PMID:21993886   PMID:21997487   PMID:22096492   PMID:22357920   PMID:22647633  
PMID:22916088   PMID:22952456   PMID:22983350   PMID:23029554   PMID:23144453   PMID:23264685   PMID:23558339   PMID:23684652   PMID:23741519   PMID:24107424   PMID:24179170   PMID:24419567  
PMID:24721652   PMID:25164814   PMID:25209858   PMID:27076431   PMID:28137758   PMID:28365586   PMID:28527294   PMID:28877879   PMID:29021227   PMID:29187368   PMID:29212953   PMID:29371419  
PMID:29672221   PMID:30628684   PMID:32079677   PMID:32245797   PMID:32325033   PMID:33065235   PMID:33153107   PMID:34499620   PMID:34632813   PMID:34681576   PMID:36237181  


Genomics

Comparative Map Data
Scnn1g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397121,333,643 - 121,367,705 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7121,333,702 - 121,367,698 (+)EnsemblGRCm39 Ensembl
GRCm387121,734,420 - 121,768,482 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7121,734,479 - 121,768,475 (+)EnsemblGRCm38mm10GRCm38
MGSCv377128,878,021 - 128,911,991 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367121,525,655 - 121,559,625 (+)NCBIMGSCv36mm8
Celera7121,627,304 - 121,655,746 (+)NCBICelera
Cytogenetic Map7F2NCBI
cM Map765.07NCBI
SCNN1G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381623,182,745 - 23,216,883 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1623,182,745 - 23,216,883 (+)EnsemblGRCh38hg38GRCh38
GRCh371623,194,066 - 23,228,204 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361623,101,541 - 23,135,701 (+)NCBINCBI36Build 36hg18NCBI36
Build 341623,101,540 - 23,135,701NCBI
Celera1621,971,795 - 22,005,983 (+)NCBICelera
Cytogenetic Map16p12.2NCBI
HuRef1621,283,200 - 21,317,389 (+)NCBIHuRef
CHM1_11624,204,072 - 24,239,947 (+)NCBICHM1_1
T2T-CHM13v2.01623,458,746 - 23,492,881 (+)NCBIT2T-CHM13v2.0
Scnn1g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81185,736,225 - 185,770,099 (+)NCBIGRCr8
mRatBN7.21176,304,942 - 176,338,816 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1176,304,942 - 176,338,816 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1184,638,693 - 184,672,499 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01191,824,639 - 191,858,441 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01184,509,747 - 184,543,391 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01191,704,397 - 191,738,271 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1191,704,311 - 191,738,268 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01198,620,974 - 198,655,013 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41180,555,660 - 180,589,534 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11180,695,574 - 180,729,447 (+)NCBI
Celera1174,023,130 - 174,057,000 (+)NCBICelera
Cytogenetic Map1q36NCBI
Scnn1g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554931,784,885 - 1,813,205 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554931,787,693 - 1,813,085 (+)NCBIChiLan1.0ChiLan1.0
SCNN1G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21824,587,647 - 24,628,257 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11629,115,419 - 29,149,991 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01614,893,631 - 14,928,402 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11623,435,793 - 23,469,969 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1623,435,793 - 23,469,969 (+)Ensemblpanpan1.1panPan2
SCNN1G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1622,566,568 - 22,593,479 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl622,567,711 - 22,593,503 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha624,133,974 - 24,160,890 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0622,710,568 - 22,737,530 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl622,710,570 - 22,737,607 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1622,514,929 - 22,541,871 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0622,418,178 - 22,445,130 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0622,812,745 - 22,839,705 (-)NCBIUU_Cfam_GSD_1.0
Scnn1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344119,830,809 - 119,861,302 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365017,932,703 - 7,958,204 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365017,932,729 - 7,958,146 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCNN1G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl322,977,947 - 23,013,384 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1322,977,940 - 23,013,384 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2323,444,625 - 23,480,163 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SCNN1G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1520,860,062 - 20,924,628 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl520,891,416 - 20,924,819 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660688,937,927 - 8,971,502 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Scnn1g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247828,424,270 - 8,452,824 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247828,424,192 - 8,452,686 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Scnn1g
961 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:437
Count of miRNA genes:305
Interacting mature miRNAs:351
Transcripts:ENSMUST00000000221
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7115699235128501724Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7117750722127967336Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
1558745Tsiq1_mT-cell secretion of IL-4 QTL 1 (mouse)Not determined7119485219125141349Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000000221   ⟹   ENSMUSP00000000221
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7121,333,702 - 121,367,698 (+)Ensembl
GRCm38.p6 Ensembl7121,734,479 - 121,768,475 (+)Ensembl
RefSeq Acc Id: NM_011326   ⟹   NP_035456
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397121,333,702 - 121,367,705 (+)NCBI
GRCm387121,734,479 - 121,768,482 (+)NCBI
MGSCv377128,878,021 - 128,911,991 (+)RGD
Celera7121,627,304 - 121,655,746 (+)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507477   ⟹   XP_006507540
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397121,333,643 - 121,367,701 (+)NCBI
GRCm387121,734,420 - 121,768,478 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_035456 (Get FASTA)   NCBI Sequence Viewer  
  XP_006507540 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD21246 (Get FASTA)   NCBI Sequence Viewer  
  AAH21338 (Get FASTA)   NCBI Sequence Viewer  
  BAE25654 (Get FASTA)   NCBI Sequence Viewer  
  EDL17252 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000000221
  ENSMUSP00000000221.6
GenBank Protein Q9WU39 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_035456   ⟸   NM_011326
- UniProtKB: Q9WU39 (UniProtKB/Swiss-Prot),   Q3UNU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006507540   ⟸   XM_006507477
- Peptide Label: isoform X1
- UniProtKB: Q3UNU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000000221   ⟸   ENSMUST00000000221

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WU39-F1-model_v2 AlphaFold Q9WU39 1-655 view protein structure

Promoters
RGD ID:8665449
Promoter ID:EPDNEW_M10756
Type:initiation region
Name:Scnn1g_1
Description:Mus musculus sodium channel, nonvoltage-gated 1 gamma , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387121,734,503 - 121,734,563EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104695 AgrOrtholog
Ensembl Genes ENSMUSG00000000216 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000000221 ENTREZGENE
  ENSMUST00000000221.6 UniProtKB/Swiss-Prot
Gene3D-CATH Acid-sensing ion channels like domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  YojJ-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ENaC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENaC_chordates UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENaC_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20278 UniProtKB/Swiss-Prot
MGD MGI:104695 ENTREZGENE
NCBI Gene 20278 ENTREZGENE
PANTHER AMILORIDE-SENSITIVE SODIUM CHANNEL SUBUNIT GAMMA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11690 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ASC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB SCNN1G RGD
PhenoGen Scnn1g PhenoGen
PRINTS AMINACHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ASC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q3UNU3 ENTREZGENE, UniProtKB/TrEMBL
  Q9WU39 ENTREZGENE, UniProtKB/Swiss-Prot