Rps6kb1 (ribosomal protein S6 kinase, polypeptide 1) - Rat Genome Database

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Gene: Rps6kb1 (ribosomal protein S6 kinase, polypeptide 1) Mus musculus
Analyze
Symbol: Rps6kb1
Name: ribosomal protein S6 kinase, polypeptide 1
RGD ID: 731645
MGI Page MGI
Description: Enables protein kinase activity. Involved in several processes, including cellular response to type II interferon; long-chain fatty acid import into cell; and negative regulation of apoptotic process. Acts upstream of or within several processes, including behavioral fear response; cellular response to hormone stimulus; and negative regulation of signal transduction. Located in mitochondrion. Is active in glutamatergic synapse. Is expressed in several structures, including central nervous system; early conceptus; leg muscle; reproductive system; and retina nuclear layer. Orthologous to human RPS6KB1 (ribosomal protein S6 kinase B1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2610318I15Rik; 4732464A07Rik; 70 kDa ribosomal protein S6 kinase 1; 70kDa; AA959758; AI256796; AI314060; p70 ribosomal S6 kinase alpha; p70 S6 kinase alpha; p70 S6K-alpha; p70 S6KA; p70-S6K 1; p70/85s; p70/85s6k; p70s; p70S6; p70s6k; P70S6K1; ribosomal protein S6 kinase beta-1; ribosomal protein S6 kinase I; ribosomal protein S6 kinase, 70kD, polypeptide 1; S6K; S6K-beta-1; S6K1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm21046  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391186,389,695 - 86,435,711 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1186,389,697 - 86,435,631 (-)EnsemblGRCm39 Ensembl
GRCm381186,498,869 - 86,544,885 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1186,498,871 - 86,544,805 (-)EnsemblGRCm38mm10GRCm38
MGSCv371186,312,511 - 86,358,309 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361186,330,178 - 86,360,969 (-)NCBIMGSCv36mm8
Celera1196,115,093 - 96,160,675 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1151.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(-)-gambogic acid  (ISO)
(S)-nicotine  (EXP,ISO)
1,1'-azobis(N,N-dimethylformamide)  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-[4,4-bis(4-fluorophenyl)butyl]-4-[4-chloro-3-(trifluoromethyl)phenyl]-4-piperidinol  (ISO)
1-octadec-9-enoylglycero-3-phosphate  (ISO)
14,15-EET  (ISO)
14-Deoxy-11,12-didehydroandrographolide  (EXP)
15-deoxy-Delta(12,14)-prostaglandin J2  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-deoxy-D-glucose  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5-triiodo-L-thyronine  (EXP)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (ISO)
3-bromopyruvic acid  (ISO)
3-chloropropane-1,2-diol  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3-methyladenine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4'-epidoxorubicin  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-nonylphenol  (ISO)
4-tert-Octylphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide  (EXP)
9-cis-retinoic acid  (EXP)
acadesine  (EXP)
acetaldehyde  (ISO)
acetylsalicylic acid  (EXP)
aconitine  (ISO)
acrolein  (ISO)
actinomycin D  (EXP,ISO)
adenosine  (ISO)
AICA ribonucleotide  (ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (EXP)
Alisol B  (ISO)
all-trans-retinoic acid  (ISO)
alpha,alpha-trehalose  (EXP)
alpha-(methylamino)isobutyric acid  (ISO)
Alpinetin  (EXP,ISO)
alternariol  (EXP)
amino acid  (EXP)
amiodarone  (ISO)
ammonium chloride  (EXP,ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP,ISO)
ANTIMYCIN  (ISO)
apigenin  (ISO)
arachidonic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (ISO)
atrazine  (ISO)
aucubin  (ISO)
avobenzone  (ISO)
azathioprine  (EXP,ISO)
bafilomycin A1  (EXP,ISO)
baicalein  (EXP)
BAPTA  (ISO)
Bardoxolone methyl  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzofurans  (ISO)
beta-D-glucosamine  (ISO)
beta-thujaplicin  (EXP)
bicalutamide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
BMS-754807  (ISO)
bortezomib  (ISO)
bromobenzene  (ISO)
bucladesine  (ISO)
butan-1-ol  (ISO)
butanal  (ISO)
Butylparaben  (ISO)
C.I. Natural Red 20  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
calciol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
calyculin a  (ISO)
cannabidiol  (ISO)
cantharidin  (ISO)
capsaicin  (ISO)
carbachol  (ISO)
carbon disulfide  (ISO)
celastrol  (ISO)
chloroquine  (EXP,ISO)
cholesterol  (EXP)
chromium atom  (EXP)
chromium(6+)  (ISO)
chrysophanol  (ISO)
cisplatin  (EXP,ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (EXP)
copper(II) sulfate  (ISO)
cordycepin  (ISO)
Corynoxine B  (ISO)
coumarin  (ISO)
crocidolite asbestos  (ISO)
cucurbitacin E  (EXP,ISO)
curcumin  (EXP,ISO)
cycloheximide  (ISO)
cyfluthrin  (EXP,ISO)
cypermethrin  (EXP)
D-glucose  (EXP)
dactolisib  (ISO)
daunorubicin  (ISO)
deguelin  (ISO)
deoxynivalenol  (EXP)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP,ISO)
diarsenic trioxide  (ISO)
dibenziodolium  (ISO)
Dictamnine  (ISO)
dieckol  (ISO)
digitoxin  (ISO)
dihydrolipoic acid  (ISO)
Dihydrotanshinone I  (ISO)
dimercaprol  (ISO)
Dinitramine  (EXP)
dioscin  (ISO)
diosgenin  (ISO)
dioxygen  (ISO)
dodecanoic acid  (EXP)
dopamine  (ISO)
dorsomorphin  (EXP,ISO)
doxorubicin  (EXP,ISO)
enzacamene  (ISO)
erlotinib hydrochloride  (ISO)
ethanol  (EXP,ISO)
ethylene glycol bis(2-aminoethyl)tetraacetic acid  (EXP,ISO)
everolimus  (ISO)
fasudil  (ISO)
fingolimod hydrochloride  (ISO)
flavanones  (ISO)
flavokawain B  (ISO)
flavonoids  (ISO)
flufenoxuron  (EXP)
flutamide  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
frenolicin B  (ISO)
Fusaric acid  (EXP)
galangin  (ISO)
gefitinib  (ISO)
genistein  (EXP)
Gingerenone A  (EXP,ISO)
gingerol  (ISO)
ginsenoside Re  (EXP)
glucose  (EXP)
glutathione  (ISO)
glycerol 2-phosphate  (ISO)
glyphosate  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
gossypol  (ISO)
hexadecanoic acid  (ISO)
HU-308  (EXP)
hydrogen peroxide  (ISO)
hydrogen sulfide  (EXP)
IC-87114  (EXP)
indometacin  (ISO)
irinotecan  (ISO)
isoprenaline  (EXP,ISO)
ivermectin  (ISO)
KN-93  (ISO)
L-ascorbic acid 2-phosphate  (ISO)
lead diacetate  (ISO)
lead nitrate  (ISO)
Licochalcone A  (ISO)
Licochalcone B  (ISO)
lonidamine  (ISO)
LY294002  (EXP,ISO)
manganese atom  (EXP)
manganese(0)  (EXP)
manganese(II) chloride  (EXP,ISO)
medroxyprogesterone acetate  (ISO)
metformin  (EXP,ISO)
methamphetamine  (ISO)
methidathion  (EXP)
methotrexate  (ISO)
methoxyacetic acid  (ISO)
metoprolol  (ISO)
miconazole  (EXP)
microcystin-LR  (EXP,ISO)
MK-2206  (ISO)
ML-7  (ISO)
morin  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodimethylamine  (ISO)
naringin  (ISO)
neomycin  (EXP)
niclosamide  (ISO)
nicotine  (EXP,ISO)
nicotinic acid  (ISO)
nitric oxide  (ISO)
Nodularin  (ISO)
Nonylphenol  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
oligopeptide  (ISO)
omipalisib  (ISO)
orotic acid  (ISO)
ouabain  (ISO)
oxybenzone  (ISO)
ozone  (EXP)
p-tert-Amylphenol  (ISO)
paclitaxel  (ISO)
palbociclib  (ISO)
paraquat  (ISO)
Parthenin  (ISO)
PD173074  (ISO)
perfluorooctanoic acid  (ISO)
phenethyl isothiocyanate  (EXP,ISO)
phenobarbital  (ISO)
phenylarsine oxide  (ISO)
phenylephrine  (ISO)
phorbol 13-acetate 12-myristate  (EXP,ISO)
phosphatidic acid  (ISO)
pioglitazone  (ISO)
pirinixic acid  (EXP)
platycodin D  (ISO)
prazosin  (ISO)
progesterone  (ISO)
propranolol  (EXP)
puerarin  (ISO)
pyrvinium  (ISO)
quercetin  (EXP,ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP,ISO)
rotenone  (EXP,ISO)
rottlerin  (ISO)
roxarsone  (ISO)
rucaparib  (ISO)
Salidroside  (ISO)
SB 203580  (EXP)
SB 415286  (ISO)
serpentine asbestos  (ISO)
sertraline  (EXP,ISO)
Shikonin  (ISO)
silicon dioxide  (ISO)
simvastatin  (EXP)
sirolimus  (EXP,ISO)
sodium arsenite  (ISO)
sodium fluoride  (EXP,ISO)
Sodium salicylate  (EXP)
sorafenib  (ISO)
stilbenoid  (ISO)
succimer  (EXP)
sulfates  (ISO)
sunitinib  (ISO)
superoxide  (ISO)
swainsonine  (EXP)
tamibarotene  (ISO)
tamoxifen  (ISO)
Tautomycin  (ISO)
Temsirolimus  (EXP,ISO)
teriflunomide  (ISO)
testosterone  (EXP,ISO)
tetrathiomolybdate(2-)  (ISO)
theobromine  (ISO)
thioacetamide  (EXP)
Thiorphan  (ISO)
torin 1  (EXP,ISO)
trametinib  (ISO)
Tributyltin oxide  (EXP)
trichloroethene  (ISO)
trichostatin A  (EXP,ISO)
trifluoperazine  (EXP,ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (EXP)
ursolic acid  (ISO)
usnic acid  (ISO)
valproic acid  (ISO)
vanadium atom  (EXP)
vanadium(0)  (EXP)
warfarin  (ISO)
wortmannin  (EXP,ISO)
zearalenone  (EXP)
zotarolimus  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA)
behavioral fear response  (IGI)
cell migration  (ISO)
cellular response to dexamethasone stimulus  (IDA)
cellular response to growth factor stimulus  (ISO)
cellular response to hormone stimulus  (ISO)
cellular response to insulin stimulus  (IBA,IGI)
cellular response to nutrient  (ISO)
cellular response to organic cyclic compound  (IDA)
cellular response to type II interferon  (IMP)
G1/S transition of mitotic cell cycle  (ISO)
germ cell development  (IDA)
long-chain fatty acid import into cell  (IMP)
long-term memory  (ISO)
modulation of chemical synaptic transmission  (IDA,IMP)
negative regulation of apoptotic process  (IMP,ISO)
negative regulation of extrinsic apoptotic signaling pathway  (IMP)
negative regulation of insulin receptor signaling pathway  (IGI,ISO)
positive regulation of mitotic cell cycle  (ISO)
positive regulation of skeletal muscle tissue growth  (ISO)
positive regulation of smooth muscle cell migration  (ISO)
positive regulation of smooth muscle cell proliferation  (ISO)
positive regulation of TORC1 signaling  (ISO)
positive regulation of translation  (ISO)
positive regulation of translational initiation  (ISO)
protein phosphorylation  (ISO)
regulation of glucose import  (ISO)
regulation of translation  (IEA)
response to amino acid  (ISO)
response to electrical stimulus involved in regulation of muscle adaptation  (ISO)
response to ethanol  (ISO)
response to glucagon  (ISO)
response to glucocorticoid  (ISO)
response to glucose  (ISO)
response to insulin  (ISO)
response to L-leucine  (ISO)
response to lipopolysaccharide  (ISO)
response to mechanical stimulus  (ISO)
response to nutrient  (ISO)
response to nutrient levels  (ISO)
response to organic cyclic compound  (ISO)
response to organic substance  (ISO)
response to organonitrogen compound  (ISO)
response to peptide hormone  (ISO)
response to testosterone  (ISO)
response to toxic substance  (ISO)
response to tumor necrosis factor  (ISO)
response to xenobiotic stimulus  (ISO)
signal transduction  (IEA)
skeletal muscle atrophy  (ISO)
skeletal muscle contraction  (ISO)
TOR signaling  (ISO)
TORC1 signaling  (ISO)

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal blood circulation  (IAGP)
abnormal cellular respiration  (IAGP)
abnormal heart morphology  (IAGP)
abnormal lipid level  (IAGP)
abnormal mitochondrial morphology  (IAGP)
abnormal muscle physiology  (IAGP)
abnormal muscle regeneration  (IAGP)
abnormal pancreatic beta cell morphology  (IAGP)
abnormal pancreatic beta cell physiology  (IAGP)
abnormal skeletal muscle morphology  (IAGP)
abnormal tibialis anterior morphology  (IAGP)
cyanosis  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased circulating glucose level  (IAGP)
decreased circulating insulin level  (IAGP)
decreased embryo size  (IAGP)
decreased epididymal fat pad weight  (IAGP)
decreased inguinal fat pad weight  (IAGP)
decreased insulin secretion  (IAGP)
decreased interscapular fat pad weight  (IAGP)
decreased litter size  (IAGP)
decreased mesenteric fat pad weight  (IAGP)
decreased pancreatic beta cell mass  (IAGP)
decreased retroperitoneal fat pad weight  (IAGP)
decreased skeletal muscle fiber diameter  (IAGP)
decreased skeletal muscle weight  (IAGP)
enlarged spleen  (IAGP)
enlarged thymus  (IAGP)
extended life span  (IAGP)
hemorrhage  (IAGP)
hyperglycemia  (IAGP)
hypoxia  (IAGP)
impaired glucose tolerance  (IAGP)
increased acute lymphoblastic leukemia incidence  (IAGP)
increased carbon dioxide production  (IAGP)
increased fatty acid beta-oxidation  (IAGP)
increased insulin sensitivity  (IAGP)
increased oxygen consumption  (IAGP)
increased skeletal muscle glycogen level  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
small pancreatic islets  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Molecular mechanisms of mTOR-mediated translational control. Ma XM and Blenis J, Nat Rev Mol Cell Biol. 2009 May;10(5):307-18. Epub 2009 Apr 2.
3. Role of insulin, adipocyte hormones, and nutrient-sensing pathways in regulating fuel metabolism and energy homeostasis: a nutritional perspective of diabetes, obesity, and cancer. Marshall S Sci STKE. 2006 Aug 1;2006(346):re7.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Oncopreventive effects of theanine and theobromine on dimethylhydrazine-induced colon cancer model. Shojaei-Zarghani S, etal., Biomed Pharmacother. 2021 Feb;134:111140. doi: 10.1016/j.biopha.2020.111140. Epub 2020 Dec 24.
11. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8524831   PMID:8889548   PMID:9560223   PMID:9822608   PMID:9927325   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11140689   PMID:11279232  
PMID:11493700   PMID:11544199   PMID:11707573   PMID:12032842   PMID:12140361   PMID:12477932   PMID:12520002   PMID:12740386   PMID:12783884   PMID:12842876   PMID:14610273   PMID:14612424  
PMID:14729612   PMID:14993219   PMID:15059936   PMID:15060135   PMID:15149849   PMID:15226426   PMID:15226823   PMID:15249583   PMID:15306821   PMID:15485887   PMID:15489334   PMID:15723049  
PMID:15782199   PMID:15895362   PMID:15963500   PMID:15988001   PMID:15998744   PMID:16141072   PMID:16141073   PMID:16183639   PMID:16329156   PMID:16452250   PMID:16602821   PMID:16777079  
PMID:16914728   PMID:16962829   PMID:17052453   PMID:17082189   PMID:17229738   PMID:17244624   PMID:17386266   PMID:17475776   PMID:17550782   PMID:17556672   PMID:17616691   PMID:17825298  
PMID:17974583   PMID:18006852   PMID:18174371   PMID:18287559   PMID:18316404   PMID:18317950   PMID:18372239   PMID:18398001   PMID:18468454   PMID:18474609   PMID:18591393   PMID:18599786  
PMID:18614690   PMID:18758466   PMID:18767117   PMID:18773906   PMID:18776140   PMID:18799693   PMID:18846252   PMID:18851840   PMID:18948408   PMID:18952604   PMID:19141683   PMID:19289497  
PMID:19389373   PMID:19433583   PMID:19474189   PMID:19535330   PMID:19574549   PMID:19634141   PMID:19720745   PMID:19794149   PMID:19797661   PMID:19841136   PMID:19850877   PMID:19874695  
PMID:19877273   PMID:19879324   PMID:19884655   PMID:19935711   PMID:19995915   PMID:20040596   PMID:20041152   PMID:20080710   PMID:20085809   PMID:20126553   PMID:20203102   PMID:20429048  
PMID:20457809   PMID:20466004   PMID:20493810   PMID:20507574   PMID:20516213   PMID:20622121   PMID:20657550   PMID:20717955   PMID:21093473   PMID:21200439   PMID:21224254   PMID:21262837  
PMID:21339731   PMID:21444676   PMID:21501832   PMID:21548202   PMID:21633171   PMID:21814187   PMID:21873635   PMID:21945076   PMID:22053050   PMID:22087027   PMID:22139847   PMID:22337810  
PMID:22412899   PMID:22493495   PMID:22586265   PMID:22711699   PMID:22727014   PMID:22787141   PMID:22797923   PMID:22798074   PMID:22837693   PMID:22844243   PMID:22846606   PMID:22848534  
PMID:22851690   PMID:22928666   PMID:22931089   PMID:22984591   PMID:23063798   PMID:23083736   PMID:23105104   PMID:23129808   PMID:23184952   PMID:23273915   PMID:23295457   PMID:23318442  
PMID:23342106   PMID:23454693   PMID:23616120   PMID:23695213   PMID:23818585   PMID:23824960   PMID:23839034   PMID:24058693   PMID:24248465   PMID:24275123   PMID:24277938   PMID:24349514  
PMID:24445950   PMID:24463367   PMID:24548427   PMID:24650522   PMID:24661902   PMID:24733831   PMID:24801387   PMID:24806451   PMID:24931163   PMID:24948799   PMID:24967341   PMID:24990923  
PMID:25179606   PMID:25193855   PMID:25273085   PMID:25304210   PMID:25382660   PMID:25412313   PMID:25512366   PMID:25555806   PMID:25617592   PMID:25635535   PMID:25646773   PMID:25680463  
PMID:25762659   PMID:25776557   PMID:25843685   PMID:25846498   PMID:25865886   PMID:25934838   PMID:25981667   PMID:26075820   PMID:26166573   PMID:26220974   PMID:26240281   PMID:26268630  
PMID:26297427   PMID:26299309   PMID:26468204   PMID:26514620   PMID:26563389   PMID:26566903   PMID:26583091   PMID:26595272   PMID:26633882   PMID:26905199   PMID:26950191   PMID:27043414  
PMID:27119228   PMID:27151441   PMID:27294524   PMID:27325676   PMID:27438654   PMID:27464336   PMID:27553280   PMID:27604858   PMID:27644329   PMID:27705797   PMID:27798115   PMID:27807348  
PMID:27965359   PMID:27993979   PMID:28137967   PMID:28178239   PMID:28242756   PMID:28320871   PMID:28341829   PMID:28542142   PMID:28626016   PMID:28671696   PMID:28783046   PMID:28798047  
PMID:28974734   PMID:29107291   PMID:29403037   PMID:29665055   PMID:29673648   PMID:29738527   PMID:29975682   PMID:30008325   PMID:30116740   PMID:30442943   PMID:30612880   PMID:30704899  
PMID:30898653   PMID:31064784   PMID:31607856   PMID:31695068   PMID:31915252   PMID:32127537   PMID:32416155   PMID:32439763   PMID:32581239   PMID:32601203   PMID:32686868   PMID:32744119  
PMID:32747435   PMID:32866472   PMID:33052068   PMID:33100228   PMID:33361822   PMID:33514739   PMID:33906942   PMID:33920542   PMID:34052210   PMID:34242585   PMID:34355805   PMID:34367237  
PMID:34395439   PMID:34537439   PMID:34553752   PMID:34793600   PMID:35022234   PMID:35338256   PMID:35608036   PMID:35645731   PMID:35733999   PMID:36198274   PMID:36398408   PMID:36526657  
PMID:36528027   PMID:37037996   PMID:37169038   PMID:37640003   PMID:37812701   PMID:37863347  


Genomics

Comparative Map Data
Rps6kb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391186,389,695 - 86,435,711 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1186,389,697 - 86,435,631 (-)EnsemblGRCm39 Ensembl
GRCm381186,498,869 - 86,544,885 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1186,498,871 - 86,544,805 (-)EnsemblGRCm38mm10GRCm38
MGSCv371186,312,511 - 86,358,309 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361186,330,178 - 86,360,969 (-)NCBIMGSCv36mm8
Celera1196,115,093 - 96,160,675 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1151.82NCBI
RPS6KB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381759,893,121 - 59,950,574 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1759,893,046 - 59,950,574 (+)EnsemblGRCh38hg38GRCh38
GRCh371757,970,482 - 58,027,935 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361755,325,225 - 55,382,569 (+)NCBINCBI36Build 36hg18NCBI36
Build 341755,325,224 - 55,382,566NCBI
Celera1754,433,949 - 54,491,301 (+)NCBICelera
Cytogenetic Map17q23.1NCBI
HuRef1753,342,941 - 53,400,248 (+)NCBIHuRef
CHM1_11758,034,428 - 58,091,804 (+)NCBICHM1_1
T2T-CHM13v2.01760,761,869 - 60,819,318 (+)NCBIT2T-CHM13v2.0
Rps6kb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81071,817,794 - 71,865,211 (-)NCBIGRCr8
mRatBN7.21071,323,777 - 71,367,908 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1071,323,777 - 71,367,908 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1075,946,721 - 75,987,672 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01075,451,529 - 75,492,547 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01070,916,142 - 70,957,095 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01073,824,200 - 73,865,503 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1073,824,202 - 73,865,364 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01076,234,192 - 76,278,394 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41076,657,024 - 76,698,088 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11076,671,395 - 76,712,458 (-)NCBI
Celera1070,248,523 - 70,289,589 (-)NCBICelera
Cytogenetic Map10q26NCBI
Rps6kb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554513,181,085 - 3,225,610 (-)NCBIChiLan1.0ChiLan1.0
RPS6KB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21976,055,147 - 76,111,993 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11780,866,830 - 80,922,483 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01753,958,807 - 54,014,752 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11758,798,930 - 58,856,480 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1758,799,069 - 58,853,653 (+)Ensemblpanpan1.1panPan2
RPS6KB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1934,387,084 - 34,590,603 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl934,387,091 - 34,425,292 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha933,618,891 - 33,820,779 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0935,197,993 - 35,401,137 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl935,198,048 - 35,253,131 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1933,981,681 - 34,184,055 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0934,266,735 - 34,469,058 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0934,353,112 - 34,555,827 (+)NCBIUU_Cfam_GSD_1.0
Rps6kb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560233,582,174 - 33,634,004 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364903,441,055 - 3,492,917 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364903,441,046 - 3,492,917 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS6KB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1236,111,653 - 36,160,376 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11236,111,584 - 36,159,287 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21237,386,770 - 37,434,407 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RPS6KB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11633,498,098 - 33,556,553 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1633,497,392 - 33,556,453 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660774,283,812 - 4,342,844 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rps6kb1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248711,667,291 - 1,702,783 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248711,667,292 - 1,705,550 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rps6kb1
1346 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2585
Count of miRNA genes:853
Interacting mature miRNAs:1141
Transcripts:ENSMUST00000020824, ENSMUST00000058286, ENSMUST00000131194, ENSMUST00000138810, ENSMUST00000149392, ENSMUST00000151748, ENSMUST00000154617
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117757387399377820Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179813759104502698Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
15092049Wsigrme3_mweek six growth rate, maternal effect 3 (mouse)118487732496629512Mouse
15092057Lgrme3_mlate growth rate, maternal effect 3 (mouse)118487732496629512Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse

Markers in Region
RH136097  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381186,502,578 - 86,502,746UniSTSGRCm38
MGSCv371186,316,080 - 86,316,248UniSTSGRCm37
Celera1196,118,667 - 96,118,835UniSTS
Cytogenetic Map11CUniSTS
AA959758  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381186,499,174 - 86,499,258UniSTSGRCm38
MGSCv371186,312,676 - 86,312,760UniSTSGRCm37
Celera1196,115,258 - 96,115,342UniSTS
Cytogenetic Map11CUniSTS
Whitehead/MRC_RH111114.75UniSTS
UniSTS:236687  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381186,515,231 - 86,515,430UniSTSGRCm38
MGSCv371186,328,733 - 86,328,932UniSTSGRCm37
Celera1196,131,322 - 96,131,521UniSTS
Cytogenetic Map11CUniSTS
AV007605  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381186,496,184 - 86,496,294UniSTSGRCm38
MGSCv371186,309,686 - 86,309,796UniSTSGRCm37
Celera1196,112,066 - 96,112,176UniSTS
Cytogenetic Map11CUniSTS
Whitehead/MRC_RH111110.65UniSTS
AI314060  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381186,515,388 - 86,515,479UniSTSGRCm38
MGSCv371186,328,890 - 86,328,981UniSTSGRCm37
Celera1196,131,479 - 96,131,570UniSTS
Cytogenetic Map11CUniSTS
Whitehead/MRC_RH111114.75UniSTS
Rps6kb1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381186,514,602 - 86,514,852UniSTSGRCm38
MGSCv371186,328,104 - 86,328,354UniSTSGRCm37
Celera1196,130,694 - 96,130,944UniSTS
Cytogenetic Map11CUniSTS
cM Map11 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001114334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004937048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB015197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ000654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL604063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JC006896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000020824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,392,859 - 86,435,631 (-)Ensembl
GRCm38.p6 Ensembl1186,502,033 - 86,544,805 (-)Ensembl
RefSeq Acc Id: ENSMUST00000058286   ⟹   ENSMUSP00000053188
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,404,809 - 86,435,600 (-)Ensembl
GRCm38.p6 Ensembl1186,513,983 - 86,544,774 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131194
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,404,444 - 86,410,865 (-)Ensembl
GRCm38.p6 Ensembl1186,513,618 - 86,520,039 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138810   ⟹   ENSMUSP00000122756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,423,598 - 86,435,591 (-)Ensembl
GRCm38.p6 Ensembl1186,532,772 - 86,544,765 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149392
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,393,425 - 86,402,471 (-)Ensembl
GRCm38.p6 Ensembl1186,502,599 - 86,511,645 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,410,470 - 86,423,666 (-)Ensembl
GRCm38.p6 Ensembl1186,519,644 - 86,532,840 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154617   ⟹   ENSMUSP00000119715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1186,389,697 - 86,435,631 (-)Ensembl
GRCm38.p6 Ensembl1186,498,871 - 86,544,805 (-)Ensembl
RefSeq Acc Id: NM_001114334   ⟹   NP_001107806
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,389,695 - 86,435,633 (-)NCBI
GRCm381186,498,869 - 86,544,807 (-)NCBI
MGSCv371186,312,511 - 86,358,309 (-)RGD
Celera1196,115,093 - 96,160,675 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001363162   ⟹   NP_001350091
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,389,695 - 86,435,633 (-)NCBI
GRCm381186,498,869 - 86,544,807 (-)NCBI
Sequence:
RefSeq Acc Id: NM_028259   ⟹   NP_082535
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,404,809 - 86,435,633 (-)NCBI
GRCm381186,513,983 - 86,544,807 (-)NCBI
MGSCv371186,312,511 - 86,358,309 (-)RGD
Celera1196,115,093 - 96,160,675 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006534315   ⟹   XP_006534378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,392,321 - 86,435,596 (-)NCBI
GRCm381186,501,565 - 86,544,773 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249275   ⟹   XP_011247577
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,829 - 86,435,711 (-)NCBI
GRCm381186,499,016 - 86,544,885 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249276   ⟹   XP_011247578
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,395,223 - 86,435,711 (-)NCBI
GRCm381186,504,394 - 86,544,885 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157014   ⟹   XP_036012907
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,389,835 - 86,435,591 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157015   ⟹   XP_036012908
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,548 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157016   ⟹   XP_036012909
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,389,835 - 86,435,567 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157017   ⟹   XP_036012910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,389,835 - 86,424,904 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036157018   ⟹   XP_036012911
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,389,835 - 86,435,596 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780060
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,711 (-)NCBI
GRCm381186,499,016 - 86,544,885 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949511
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,711 (-)NCBI
GRCm381186,504,345 - 86,544,885 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949513
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,711 (-)NCBI
GRCm381186,499,972 - 86,544,885 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937042
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,392,391 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937043
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,392,391 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937044
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,392,391 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937045
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,402,664 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937046
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937047
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004937048
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,390,798 - 86,435,711 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879743
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391186,392,391 - 86,435,711 (-)NCBI
GRCm381186,499,972 - 86,544,885 (-)NCBI
Sequence:
RefSeq Acc Id: NP_082535   ⟸   NM_028259
- Peptide Label: isoform 2
- UniProtKB: Q8C3J7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001107806   ⟸   NM_001114334
- Peptide Label: isoform 1
- UniProtKB: Q5SWG1 (UniProtKB/Swiss-Prot),   Q8CHX0 (UniProtKB/Swiss-Prot),   Q8BSK8 (UniProtKB/Swiss-Prot),   Q3UXD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006534378   ⟸   XM_006534315
- Peptide Label: isoform X2
- UniProtKB: Q3UXD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247577   ⟸   XM_011249275
- Peptide Label: isoform X1
- UniProtKB: Q3UXD8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247578   ⟸   XM_011249276
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001350091   ⟸   NM_001363162
- Peptide Label: isoform 3
- UniProtKB: Q3UXD8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000122756   ⟸   ENSMUST00000138810
RefSeq Acc Id: ENSMUSP00000119715   ⟸   ENSMUST00000154617
RefSeq Acc Id: ENSMUSP00000053188   ⟸   ENSMUST00000058286
RefSeq Acc Id: XP_036012911   ⟸   XM_036157018
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036012907   ⟸   XM_036157014
- Peptide Label: isoform X4
- UniProtKB: Q9CST0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012909   ⟸   XM_036157016
- Peptide Label: isoform X4
- UniProtKB: Q9CST0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012910   ⟸   XM_036157017
- Peptide Label: isoform X4
- UniProtKB: Q9CST0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012908   ⟸   XM_036157015
- Peptide Label: isoform X4
- UniProtKB: Q9CST0 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BSK8-F1-model_v2 AlphaFold Q8BSK8 1-525 view protein structure

Promoters
RGD ID:6822012
Promoter ID:MM_KWN:9018
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000020821,   ENSMUST00000108034,   NM_028259,   OTTMUST00000002379,   OTTMUST00000002382,   OTTMUST00000002383,   OTTMUST00000002390,   OTTMUST00000002392,   UC007KSP.1,   UC007KSS.1,   UC007KST.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361186,358,186 - 86,358,686 (-)MPROMDB
RGD ID:8676016
Promoter ID:EPDNEW_M16039
Type:multiple initiation site
Name:Rps6kb1_1
Description:Mus musculus ribosomal protein S6 kinase, polypeptide 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381186,544,770 - 86,544,830EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1270849 AgrOrtholog
Ensembl Genes ENSMUSG00000020516 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000058286 ENTREZGENE
  ENSMUST00000058286.9 UniProtKB/TrEMBL
  ENSMUST00000138810.3 UniProtKB/TrEMBL
  ENSMUST00000154617 ENTREZGENE
  ENSMUST00000154617.8 UniProtKB/Swiss-Prot
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_S6_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1270849 ENTREZGENE
NCBI Gene 72508 ENTREZGENE
PANTHER RIBOSOMAL PROTEIN S6 KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN S6 KINASE BETA-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rps6kb1 PhenoGen
PIRSF Ribsml_S6_kin_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE AGC_KINASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TK_X UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt KS6B1_MOUSE UniProtKB/Swiss-Prot
  Q3UXD8 ENTREZGENE, UniProtKB/TrEMBL
  Q5SWG1 ENTREZGENE
  Q5SWG2_MOUSE UniProtKB/TrEMBL
  Q6IQZ7_MOUSE UniProtKB/TrEMBL
  Q8BSK8 ENTREZGENE
  Q8C3J7 ENTREZGENE, UniProtKB/TrEMBL
  Q8CHX0 ENTREZGENE
  Q9CST0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q5SWG1 UniProtKB/Swiss-Prot
  Q8CHX0 UniProtKB/Swiss-Prot