PGR (progesterone receptor) - Rat Genome Database

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Gene: PGR (progesterone receptor) Homo sapiens
Analyze
Symbol: PGR
Name: progesterone receptor
RGD ID: 731081
HGNC Page HGNC:8910
Description: Enables several functions, including ATPase binding activity; DNA-binding transcription activator activity, RNA polymerase II-specific; and transcription coactivator binding activity. Involved in maintenance of protein location in nucleus; negative regulation of phosphorylation; and regulation of gene expression. Is active in plasma membrane. Implicated in endometriosis; hyperprolactinemia; and obesity. Biomarker of ductal carcinoma in situ.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: NR3C3; nuclear receptor subfamily 3 group C member 3; PR
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811101,029,624 - 101,129,813 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11101,029,624 - 101,129,813 (-)EnsemblGRCh38hg38GRCh38
GRCh3711100,900,355 - 101,000,544 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611100,414,313 - 100,506,465 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411100,414,312 - 100,506,465NCBI
Celera1198,069,715 - 98,169,894 (-)NCBICelera
Cytogenetic Map11q22.1NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBIHuRef
CHM1_111100,783,609 - 100,883,736 (-)NCBICHM1_1
T2T-CHM13v2.011101,039,187 - 101,139,328 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (EXP,ISO)
(20S)-ginsenoside Rh1  (EXP)
(25R)-cholest-5-ene-3beta,26-diol  (EXP)
(R)-camphor  (EXP)
(R)-linalyl acetate  (EXP)
(S)-naringenin  (EXP,ISO)
(S)-nicotine  (EXP)
1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane  (EXP,ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-(3-(trifluoromethyl)phenyl)piperazine  (EXP)
1-benzylpiperazine  (EXP)
1-Hydroxypyrene  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17alpha-hydroxyprogesterone  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,2-(2-Chlorophenyl-4'-chlorophenyl)-1,1-dichloroethene  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,3',4,4',5,5'-Heptachlorobiphenyl  (EXP)
2,3,4,5-Tetrachloro-4'-biphenylol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-Trimethylbenzaldehyde  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP,ISO)
2-hydroxybenzoic acid (3,3,5-trimethylcyclohexyl) ester  (EXP)
2-palmitoylglycerol  (EXP)
26-hydroxycholesterol  (EXP)
3',5'-cyclic AMP  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,10-heptadecafluoro-1-decanol  (EXP)
3,5-di-tert-Butyl-4-hydroxybenzaldehyde  (EXP)
3,6-diaminoacridine  (EXP)
3,7-dihydropurine-6-thione  (ISO)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (EXP)
3-methylcholanthrene  (EXP,ISO)
4'-epidoxorubicin  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxy-17beta-estradiol  (ISO)
4-nonylphenol  (EXP,ISO)
4-terpineol  (EXP)
4-tert-butylphenol  (EXP)
4-tert-Octylphenol  (EXP,ISO)
5-aza-2'-deoxycytidine  (EXP)
5-fluorouracil  (EXP)
6-oxocampestanol  (EXP)
8-Br-cAMP  (EXP)
adefovir pivoxil  (EXP)
afimoxifene  (EXP,ISO)
alachlor  (EXP)
aldicarb  (EXP)
aldrin  (EXP)
all-trans-retinoic acid  (EXP)
alpha-hexachlorocyclohexane  (EXP)
alpha-Methylstyrene  (EXP)
alpha-naphthoflavone  (EXP)
alpha-Zearalanol  (ISO)
alternariol  (EXP)
aminoglutethimide  (EXP)
amlodipine  (EXP)
ammonium sulfate  (EXP)
amsacrine  (EXP)
anastrozole  (EXP)
androgen antagonist  (ISO)
apigenin  (EXP)
aprepitant  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
artesunate  (EXP)
atrazine  (EXP,ISO)
bendiocarb  (EXP)
benzo[a]pyrene  (EXP)
beta-hexachlorocyclohexane  (EXP)
bexarotene  (EXP)
bicalutamide  (EXP)
bifenthrin  (EXP,ISO)
biochanin A  (EXP,ISO)
biphenyl-2-ol  (EXP)
biphenyl-4-ol  (EXP)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol A dimethacrylate  (EXP)
Bisphenol B  (EXP)
bisphenol F  (EXP)
bortezomib  (EXP)
budesonide  (EXP)
buta-1,3-diene  (ISO)
butylated hydroxyanisole  (EXP,ISO)
Butylbenzyl phthalate  (EXP,ISO)
Butylparaben  (EXP,ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
camphor  (EXP)
camptothecin  (EXP)
carbaryl  (EXP)
carbon nanotube  (ISO)
carfilzomib  (EXP)
chlordecone  (EXP,ISO)
chlorogenic acid  (EXP)
chlorpyrifos  (EXP,ISO)
Chorionic gonadotropin  (EXP)
chrysen-6-ol  (EXP)
Ciclesonide  (EXP)
ciclopirox  (EXP)
clomiphene  (EXP)
cobalt dichloride  (EXP)
cocaine  (ISO)
colforsin daropate hydrochloride  (ISO)
copper(II) chloride  (EXP)
coumestrol  (EXP,ISO)
Cuprizon  (ISO)
cyclohexanone  (EXP)
cyfluthrin  (EXP)
cyhalothrin  (EXP)
cypermethrin  (EXP,ISO)
cyproterone acetate  (EXP)
daidzein  (EXP)
daidzein 7-O-beta-D-glucoside  (EXP)
danazol  (EXP)
DDD  (EXP)
DDE  (EXP,ISO)
DDT  (EXP,ISO)
delta-hexachlorocyclohexane  (EXP)
deoxynivalenol  (EXP)
desogestrel  (EXP)
diarylheptanoid  (EXP,ISO)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (ISO)
dieldrin  (EXP,ISO)
diethyl phthalate  (EXP,ISO)
diethylstilbestrol  (EXP,ISO)
difenoconazole  (EXP)
digitoxin  (EXP)
diisobutyl phthalate  (EXP,ISO)
diisononyl phthalate  (EXP,ISO)
dioxygen  (ISO)
disodium selenite  (EXP)
doxorubicin  (EXP)
dronedarone  (EXP)
drospirenone  (EXP)
dydrogesterone  (EXP)
elcometrine  (EXP)
emetine  (EXP)
endosulfan  (EXP,ISO)
endrin  (EXP)
enzacamene  (EXP,ISO)
epoxiconazole  (ISO)
erucamide  (EXP)
Estradiol dipropionate  (ISO)
estriol  (EXP)
estrogen  (ISO)
estrone  (EXP)
ethanol  (ISO)
ethyl myristate  (EXP)
ethylparaben  (EXP,ISO)
etonogestrel  (EXP)
etoposide phosphate  (EXP)
exemestane  (EXP)
ezetimibe  (EXP)
fenhexamid  (EXP)
fenpyroximate  (EXP)
fenvalerate  (EXP)
fludioxonil  (EXP)
flumethrin  (EXP)
flunisolide  (EXP)
fluoxastrobin  (EXP)
flutamide  (EXP,ISO)
fluticasone  (EXP)
flutolanil  (EXP)
fulvestrant  (EXP,ISO)
galaxolide  (EXP)
gamma-hexachlorocyclohexane  (EXP)
gamma-terpinene  (EXP)
geldanamycin  (EXP)
gemcitabine  (EXP)
genistein  (EXP,ISO)
gentamycin  (ISO)
geraniol  (ISO)
gestodene  (EXP)
ginsenoside Rb1  (EXP)
ginsenoside Re  (EXP)
ginsenoside Rg1  (EXP)
glutathione  (ISO)
glyceollin  (EXP)
glyphosate  (EXP,ISO)
Goserelin  (EXP)
heptachlor  (EXP,ISO)
Heptachlor epoxide  (EXP)
herbicide  (EXP)
hexachlorobenzene  (EXP)
hexestrol  (EXP)
hydrogen peroxide  (ISO)
icariin  (EXP)
Icaritin  (EXP)
ICI-164384  (EXP)
imidacloprid  (EXP)
Indeno[1,2,3-cd]pyrene  (EXP)
irilone  (EXP)
Isobavachin  (EXP)
Isobutylparaben  (ISO)
isoflavones  (ISO)
isophorone  (EXP)
Isopropylparaben  (ISO)
isoprothiolane  (EXP)
kaempferol  (EXP)
ketoconazole  (EXP)
kresoxim-methyl  (EXP)
lasofoxifene  (ISO)
Laurolactam  (EXP)
lead(II) chloride  (EXP)
letrozole  (EXP)
levonorgestrel  (EXP)
limonene  (EXP)
linalool  (EXP)
linalyl acetate  (EXP)
linuron  (ISO)
loteprednol etabonate  (EXP)
medroxyprogesterone  (EXP)
medroxyprogesterone acetate  (EXP,ISO)
megestrol acetate  (EXP)
melatonin  (EXP,ISO)
mercaptopurine  (ISO)
mercury dichloride  (EXP)
mestranol  (EXP)
methimazole  (ISO)
methomyl  (EXP)
methotrexate  (EXP)
methoxyacetic acid  (EXP,ISO)
methoxychlor  (EXP,ISO)
methyl laurate  (EXP)
methylmercury chloride  (ISO)
methylparaben  (EXP)
methylseleninic acid  (EXP)
methyltestosterone  (ISO)
mifepristone  (EXP,ISO)
Mitotane  (EXP)
mometasone furoate  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
Monobutylphthalate  (ISO)
mycophenolic acid  (EXP)
mycotoxin  (EXP)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
nandrolone  (EXP)
nebivolol  (EXP)
nickel atom  (EXP)
nickel dichloride  (EXP)
niclosamide  (EXP)
nicotine  (EXP)
nonane  (EXP)
Nonylphenol  (EXP,ISO)
norethisterone  (EXP)
Norethynodrel  (EXP)
norgestimate  (EXP)
okadaic acid  (EXP)
onapristone  (EXP)
ormeloxifene  (ISO)
Osajin  (EXP)
oseltamivir  (EXP)
oxaliplatin  (EXP)
oxamyl  (EXP)
oxybenzone  (EXP,ISO)
oxymetholone  (EXP)
ozone  (ISO)
p-tert-Amylphenol  (EXP,ISO)
p-tolualdehyde  (EXP)
paracetamol  (ISO)
pazopanib  (EXP)
PCB138  (ISO)
pentachlorophenol  (EXP)
pentobarbital  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
phenanthrene  (EXP)
phenol red  (EXP)
PhIP  (EXP,ISO)
phorbol 13-acetate 12-myristate  (EXP)
phthalic acid  (EXP)
phytoestrogen  (EXP)
picene  (EXP)
picoxystrobin  (EXP)
plumbagin  (ISO)
Pomiferin  (EXP)
potassium chloride  (EXP)
prochloraz  (ISO)
procymidone  (ISO)
progesterone  (EXP,ISO)
promegestone  (EXP,ISO)
propoxur  (EXP)
propylparaben  (EXP,ISO)
pterostilbene  (EXP)
puerarin  (EXP,ISO)
purine-6-thiol  (ISO)
pyrene  (EXP)
pyridaben  (EXP)
quercetin  (EXP)
radicicol  (EXP)
raloxifene  (EXP,ISO)
resveratrol  (EXP,ISO)
Rosavin  (EXP)
rotenone  (EXP)
RU 58668  (EXP)
rubitecan  (EXP)
S-methyl methanethiosulfonate  (EXP)
Se-methyl-L-selenocysteine  (EXP)
Se-methylselenocysteine  (EXP)
silicon dioxide  (ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
simazine  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (EXP)
sodium fluoride  (ISO)
sophoraflavanone B  (EXP,ISO)
Sophoricoside  (ISO)
staurosporine  (EXP)
stilben-4-ol  (EXP)
stilbene-4,4'-diol  (EXP)
sulindac sulfide  (EXP)
sulindac sulfone  (EXP)
sunitinib  (EXP)
T-2 toxin  (EXP)
tamoxifen  (EXP,ISO)
tanespimycin  (ISO)
tea tree oil  (EXP)
tegaserod  (EXP)
Temsirolimus  (EXP)
teniposide  (EXP)
testosterone  (EXP)
Testosterone propionate  (ISO)
Tetrachlorobisphenol A  (EXP)
tetraphene  (EXP)
tibolone  (EXP)
ticlopidine  (EXP)
tolcapone  (EXP)
toxaphene  (EXP,ISO)
TRAM-34  (EXP)
trans-stilbene-4,4'-diol  (EXP)
triamcinolone  (EXP)
trichostatin A  (EXP,ISO)
trifloxystrobin  (EXP)
trimegestone  (EXP)
triphenyl phosphate  (EXP)
triptonide  (ISO)
tris(2-butoxyethyl) phosphate  (EXP)
ursodeoxycholic acid  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (EXP,ISO)
vorinostat  (EXP)
wortmannin  (ISO)
XL147  (ISO)
zearalenone  (EXP)
zidovudine  (EXP)
zinc oxide  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cell-cell signaling  (TAS)
cellular response to estrogen stimulus  (ISO)
cellular response to follicle-stimulating hormone stimulus  (ISO)
cellular response to gonadotropin stimulus  (ISO)
cellular response to luteinizing hormone stimulus  (ISO)
cellular response to wortmannin  (ISO)
diterpenoid metabolic process  (ISO)
epithelial cell maturation  (IEA,ISO)
estrous cycle  (ISO)
female mating behavior  (ISO)
G protein-coupled receptor signaling pathway  (IEA)
glandular epithelial cell maturation  (IEA,ISO)
intracellular steroid hormone receptor signaling pathway  (IBA,IEA)
lung alveolus development  (IEA,ISO)
luteinization  (ISO)
maintenance of protein location in nucleus  (IMP)
mammary gland development  (IEA,ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of DNA-templated transcription  (ISO)
negative regulation of gene expression  (IEP)
negative regulation of granulosa cell apoptotic process  (ISO)
negative regulation of phosphorylation  (IEP)
ovulation from ovarian follicle  (IEA,ISO)
paracrine signaling  (IEA,ISO)
positive regulation of cell population proliferation  (ISO)
positive regulation of DNA-templated transcription  (ISO)
positive regulation of gene expression  (NAS)
positive regulation of smooth muscle cell migration  (ISO)
positive regulation of transcription by RNA polymerase II  (IDA)
progesterone receptor signaling pathway  (IC,IEA,ISO)
regulation of DNA-templated transcription  (EXP,IEA,ISO)
regulation of epithelial cell proliferation  (IEA,ISO)
regulation of transcription by RNA polymerase II  (IBA)
response to cocaine  (ISO)
response to estrogen  (ISO)
response to progesterone  (ISO)
signal transduction  (TAS)
smooth muscle relaxation of the bladder outlet  (ISO)
steroid hormone mediated signaling pathway  (IEA)
tertiary branching involved in mammary gland duct morphogenesis  (IEA,ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. PROGINS Alu sequence insertion is associated with hyperprolactinaemia but not leiomyoma susceptibility. Hsieh YY, etal., Clin Endocrinol (Oxf). 2005 Apr;62(4):492-7.
3. Estrogen-induced activation of hypoxia-inducible factor-1alpha, vascular endothelial growth factor expression, and edema in the uterus are mediated by the phosphatidylinositol 3-kinase/Akt pathway. Kazi AA and Koos RD, Endocrinology. 2007 May;148(5):2363-74. doi: 10.1210/en.2006-1394. Epub 2007 Feb 1.
4. Distribution of membrane progesterone receptor alpha in the male mouse and rat brain and its regulation after traumatic brain injury. Meffre D, etal., Neuroscience. 2013 Feb 12;231:111-24. doi: 10.1016/j.neuroscience.2012.11.039. Epub 2012 Dec 2.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Biological markers that predict clinical recurrence in ductal carcinoma in situ of the breast. Provenzano E, etal., Eur J Cancer. 2003 Mar;39(5):622-30.
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
9. Association between polymorphisms in the progesterone receptor gene and endometriosis. Treloar SA, etal., Mol Hum Reprod. 2005 Sep;11(9):641-7. Epub 2005 Aug 26.
10. Correlates of obesity in postmenopausal women with breast cancer: comparison of genetic, demographic, disease-related, life history and dietary factors. Wasserman L, etal., Int J Obes Relat Metab Disord. 2004 Jan;28(1):49-56.
11. [The changes of estrogen receptor (ER) and progesterone receptor (PR) mRNAs in endometrium with endometriosis]. Zheng H, etal., Zhongguo Ying Yong Sheng Li Xue Za Zhi. 2004 May;20(2):194-6.
12. Disruption in the expression and immunolocalisation of steroid receptors and steroidogenic enzymes in letrozole-induced polycystic ovaries in rat. Zurvarra FM, etal., Reprod Fertil Dev. 2009;21(7):827-39.
Additional References at PubMed
PMID:1517211   PMID:1557371   PMID:2328727   PMID:2736623   PMID:3551956   PMID:6849751   PMID:7481822   PMID:7983041   PMID:7989520   PMID:8626413   PMID:8671234   PMID:9115274  
PMID:9223281   PMID:9305541   PMID:9598870   PMID:9620806   PMID:9671457   PMID:9710597   PMID:9891052   PMID:10338464   PMID:10480874   PMID:10684807   PMID:10722692   PMID:10750018  
PMID:10757795   PMID:10819762   PMID:10840043   PMID:10903152   PMID:11110801   PMID:11117526   PMID:11117529   PMID:11323389   PMID:11326686   PMID:11545730   PMID:11668223   PMID:11668524  
PMID:11677150   PMID:11689696   PMID:11717311   PMID:11809754   PMID:11821088   PMID:11918216   PMID:11948021   PMID:12009358   PMID:12010857   PMID:12011095   PMID:12021276   PMID:12021930  
PMID:12038703   PMID:12039952   PMID:12048256   PMID:12058073   PMID:12088866   PMID:12090595   PMID:12101239   PMID:12113882   PMID:12114521   PMID:12149147   PMID:12174912   PMID:12218173  
PMID:12297552   PMID:12402980   PMID:12414909   PMID:12446585   PMID:12466272   PMID:12511607   PMID:12517594   PMID:12529333   PMID:12538866   PMID:12554765   PMID:12554776   PMID:12556966  
PMID:12574227   PMID:12579263   PMID:12594000   PMID:12612073   PMID:12644308   PMID:12650698   PMID:12650714   PMID:12672823   PMID:12673676   PMID:12699057   PMID:12748280   PMID:12759236  
PMID:12771131   PMID:12861133   PMID:12874288   PMID:12899921   PMID:12917342   PMID:12943706   PMID:14500352   PMID:14519645   PMID:14551264   PMID:14586360   PMID:14617569   PMID:14634838  
PMID:14667966   PMID:14667967   PMID:14684847   PMID:14764828   PMID:14769635   PMID:14978266   PMID:15001645   PMID:15019994   PMID:15036714   PMID:15084343   PMID:15084345   PMID:15102680  
PMID:15171716   PMID:15184270   PMID:15219637   PMID:15272913   PMID:15272917   PMID:15282304   PMID:15282324   PMID:15308690   PMID:15330195   PMID:15381922   PMID:15509639   PMID:15535845  
PMID:15555905   PMID:15562029   PMID:15563544   PMID:15572421   PMID:15579801   PMID:15598772   PMID:15601848   PMID:15607534   PMID:15613410   PMID:15632380   PMID:15654614   PMID:15694343  
PMID:15694360   PMID:15698546   PMID:15718480   PMID:15728178   PMID:15743833   PMID:15797250   PMID:15798179   PMID:15863956   PMID:15866121   PMID:15937332   PMID:15996107   PMID:16109739  
PMID:16168103   PMID:16244490   PMID:16323958   PMID:16331541   PMID:16339279   PMID:16339776   PMID:16352595   PMID:16360811   PMID:16384861   PMID:16439457   PMID:16477637   PMID:16478993  
PMID:16481409   PMID:16484338   PMID:16524927   PMID:16537702   PMID:16614108   PMID:16646051   PMID:16647340   PMID:16728408   PMID:16740656   PMID:16759928   PMID:16762974   PMID:16772530  
PMID:16799708   PMID:16901007   PMID:16920727   PMID:16973758   PMID:16985250   PMID:16999816   PMID:17006756   PMID:17015480   PMID:17018785   PMID:17021053   PMID:17081988   PMID:17224149  
PMID:17259978   PMID:17277083   PMID:17291258   PMID:17293450   PMID:17316413   PMID:17347654   PMID:17413977   PMID:17484509   PMID:17512111   PMID:17522428   PMID:17592773   PMID:17599361  
PMID:17609436   PMID:17609999   PMID:17646097   PMID:17717077   PMID:17727850   PMID:17785366   PMID:17805208   PMID:17845055   PMID:17847935   PMID:17885486   PMID:17896177   PMID:17914494  
PMID:17919323   PMID:17950525   PMID:17951080   PMID:17958742   PMID:17965625   PMID:17992477   PMID:18029348   PMID:18042733   PMID:18048499   PMID:18096667   PMID:18184269   PMID:18189290  
PMID:18197009   PMID:18202149   PMID:18215457   PMID:18219286   PMID:18249378   PMID:18276950   PMID:18281038   PMID:18313072   PMID:18316616   PMID:18321550   PMID:18375150   PMID:18378698  
PMID:18384825   PMID:18386458   PMID:18391223   PMID:18392676   PMID:18394649   PMID:18421469   PMID:18481002   PMID:18483177   PMID:18483761   PMID:18508999   PMID:18510611   PMID:18511503  
PMID:18557990   PMID:18617611   PMID:18620420   PMID:18628428   PMID:18629635   PMID:18631401   PMID:18636124   PMID:18645713   PMID:18665217   PMID:18668363   PMID:18676680   PMID:18681990  
PMID:18683043   PMID:18686353   PMID:18691687   PMID:18722616   PMID:18776045   PMID:18798271   PMID:18801410   PMID:18818748   PMID:18819936   PMID:18835831   PMID:18850387   PMID:18980792  
PMID:19019335   PMID:19031960   PMID:19056530   PMID:19061285   PMID:19064572   PMID:19093516   PMID:19094228   PMID:19095059   PMID:19106225   PMID:19124506   PMID:19147544   PMID:19147702  
PMID:19152063   PMID:19154258   PMID:19170196   PMID:19175383   PMID:19196877   PMID:19205874   PMID:19205877   PMID:19208263   PMID:19208313   PMID:19211567   PMID:19217090   PMID:19220894  
PMID:19258476   PMID:19267271   PMID:19274049   PMID:19284643   PMID:19296948   PMID:19299443   PMID:19309393   PMID:19330259   PMID:19336370   PMID:19339282   PMID:19357364   PMID:19367380  
PMID:19372234   PMID:19382201   PMID:19383545   PMID:19389812   PMID:19415745   PMID:19419938   PMID:19423537   PMID:19423654   PMID:19436038   PMID:19458022   PMID:19462450   PMID:19476621  
PMID:19497994   PMID:19499404   PMID:19527514   PMID:19551860   PMID:19553667   PMID:19555469   PMID:19574343   PMID:19574486   PMID:19604497   PMID:19609353   PMID:19625176   PMID:19636371  
PMID:19657752   PMID:19673915   PMID:19676041   PMID:19692168   PMID:19696694   PMID:19701771   PMID:19706513   PMID:19715581   PMID:19720911   PMID:19739075   PMID:19762712   PMID:19782484  
PMID:19809499   PMID:19820388   PMID:19835506   PMID:19838027   PMID:19846565   PMID:19852793   PMID:19887485   PMID:19913121   PMID:19940123   PMID:19940364   PMID:19952285   PMID:19952937  
PMID:19961842   PMID:19996313   PMID:20000807   PMID:20019164   PMID:20026682   PMID:20063045   PMID:20076999   PMID:20082859   PMID:20082875   PMID:20087430   PMID:20087433   PMID:20090851  
PMID:20096719   PMID:20097334   PMID:20123965   PMID:20124487   PMID:20140262   PMID:20148360   PMID:20167054   PMID:20228224   PMID:20299092   PMID:20305341   PMID:20308044   PMID:20308837  
PMID:20335148   PMID:20337826   PMID:20374701   PMID:20379614   PMID:20381444   PMID:20392877   PMID:20400074   PMID:20404095   PMID:20436503   PMID:20453000   PMID:20484415   PMID:20547493  
PMID:20550710   PMID:20557310   PMID:20586553   PMID:20592363   PMID:20628086   PMID:20634197   PMID:20646629   PMID:20661446   PMID:20690804   PMID:20713855   PMID:20716560   PMID:20719308  
PMID:20734064   PMID:20814185   PMID:20829392   PMID:20844986   PMID:20861224   PMID:20872186   PMID:20873988   PMID:20876300   PMID:20890067   PMID:20920367   PMID:20946440   PMID:20956022  
PMID:20959426   PMID:20960162   PMID:20962507   PMID:21029696   PMID:21062926   PMID:21085752   PMID:21086036   PMID:21093858   PMID:21095220   PMID:21119048   PMID:21141441   PMID:21145845  
PMID:21148628   PMID:21152100   PMID:21152841   PMID:21184272   PMID:21184768   PMID:21243274   PMID:21269613   PMID:21271213   PMID:21273440   PMID:21340479   PMID:21397694   PMID:21422407  
PMID:21432776   PMID:21437249   PMID:21444077   PMID:21447625   PMID:21459801   PMID:21464042   PMID:21491087   PMID:21518957   PMID:21544804   PMID:21600232   PMID:21619605   PMID:21655654  
PMID:21695196   PMID:21700456   PMID:21730049   PMID:21736840   PMID:21749714   PMID:21751163   PMID:21762477   PMID:21764500   PMID:21815951   PMID:21816898   PMID:21840784   PMID:21840910  
PMID:21873635   PMID:21877015   PMID:21901395   PMID:21980607   PMID:22004841   PMID:22022496   PMID:22031296   PMID:22047608   PMID:22057681   PMID:22092403   PMID:22093824   PMID:22102068  
PMID:22105149   PMID:22107784   PMID:22119825   PMID:22199306   PMID:22201220   PMID:22203942   PMID:22217299   PMID:22281037   PMID:22290394   PMID:22329840   PMID:22369759   PMID:22394363  
PMID:22396492   PMID:22414972   PMID:22419721   PMID:22466340   PMID:22492871   PMID:22496908   PMID:22509838   PMID:22529366   PMID:22535964   PMID:22545144   PMID:22564243   PMID:22580007  
PMID:22590818   PMID:22613790   PMID:22633539   PMID:22697792   PMID:22722322   PMID:22727345   PMID:22808109   PMID:22891251   PMID:22972951   PMID:23018797   PMID:23022996   PMID:23029355  
PMID:23060300   PMID:23177737   PMID:23199240   PMID:23209664   PMID:23222299   PMID:23307470   PMID:23339407   PMID:23349706   PMID:23397283   PMID:23474171   PMID:23485561   PMID:23490124  
PMID:23506845   PMID:23518922   PMID:23558572   PMID:23570281   PMID:23574718   PMID:23603247   PMID:23666965   PMID:23668054   PMID:23687977   PMID:23699411   PMID:23706170   PMID:23723333  
PMID:23757214   PMID:23764995   PMID:23810009   PMID:23812730   PMID:23818346   PMID:23818347   PMID:23818363   PMID:23859042   PMID:23873108   PMID:23880761   PMID:23881388   PMID:23907837  
PMID:23934021   PMID:23970345   PMID:23977306   PMID:23995840   PMID:24021827   PMID:24036907   PMID:24051696   PMID:24057181   PMID:24114857   PMID:24162264   PMID:24197980   PMID:24225150  
PMID:24245695   PMID:24269135   PMID:24276461   PMID:24300977   PMID:24302725   PMID:24322014   PMID:24398991   PMID:24401087   PMID:24415758   PMID:24423317   PMID:24442343   PMID:24469035  
PMID:24481237   PMID:24531693   PMID:24549642   PMID:24570392   PMID:24606123   PMID:24664419   PMID:24667714   PMID:24684970   PMID:24753260   PMID:24785095   PMID:24815444   PMID:24851606  
PMID:24894997   PMID:24909783   PMID:24943061   PMID:24945100   PMID:24992175   PMID:25015900   PMID:25037596   PMID:25076292   PMID:25155819   PMID:25170613   PMID:25216078   PMID:25217304  
PMID:25228088   PMID:25231870   PMID:25261374   PMID:25281525   PMID:25337220   PMID:25338681   PMID:25353185   PMID:25385317   PMID:25439299   PMID:25494303   PMID:25584414   PMID:25595111  
PMID:25600243   PMID:25603724   PMID:25723513   PMID:25778292   PMID:25778295   PMID:25802405   PMID:25833156   PMID:25845386   PMID:25875046   PMID:25894978   PMID:25908555   PMID:26006736  
PMID:26036714   PMID:26037298   PMID:26045548   PMID:26053183   PMID:26153859   PMID:26160085   PMID:26161666   PMID:26252518   PMID:26260940   PMID:26261614   PMID:26286601   PMID:26304264  
PMID:26340407   PMID:26387168   PMID:26403396   PMID:26428028   PMID:26458823   PMID:26517007   PMID:26550991   PMID:26577046   PMID:26579819   PMID:26693071   PMID:26715264   PMID:26742937  
PMID:26820652   PMID:26829108   PMID:26881523   PMID:26892043   PMID:26916548   PMID:26996671   PMID:27022068   PMID:27069179   PMID:27080304   PMID:27163153   PMID:27171541   PMID:27220952  
PMID:27233474   PMID:27323100   PMID:27323161   PMID:27377889   PMID:27449817   PMID:27462784   PMID:27466487   PMID:27479811   PMID:27593876   PMID:27632388   PMID:27634883   PMID:27653036  
PMID:27663075   PMID:27664517   PMID:27690341   PMID:27717886   PMID:27728856   PMID:27886516   PMID:27960568   PMID:28248726   PMID:28320297   PMID:28333280   PMID:28365834   PMID:28376177  
PMID:28416639   PMID:28490348   PMID:28522317   PMID:28540297   PMID:28576827   PMID:28614857   PMID:28671036   PMID:28692043   PMID:28713912   PMID:28736153   PMID:28832070   PMID:28870906  
PMID:28912152   PMID:28929346   PMID:28935174   PMID:28972310   PMID:28975433   PMID:29081408   PMID:29084518   PMID:29126102   PMID:29162724   PMID:29202468   PMID:29208958   PMID:29217458  
PMID:29285885   PMID:29353001   PMID:29353824   PMID:29368311   PMID:29370776   PMID:29383962   PMID:29409530   PMID:29417738   PMID:29491078   PMID:29629944   PMID:29630404   PMID:29729689  
PMID:29762972   PMID:29894708   PMID:29916276   PMID:30054508   PMID:30117066   PMID:30250632   PMID:30443761   PMID:30452456   PMID:30534815   PMID:30553188   PMID:30734405   PMID:30782101  
PMID:30829727   PMID:30926428   PMID:30936295   PMID:31100306   PMID:31262976   PMID:31373033   PMID:31583246   PMID:31598691   PMID:31763970   PMID:31805393   PMID:32004675   PMID:32102520  
PMID:32108623   PMID:32210727   PMID:32317515   PMID:32335672   PMID:32437964   PMID:32493230   PMID:32733932   PMID:32777541   PMID:32795492   PMID:32800344   PMID:33112958   PMID:33219367  
PMID:33230916   PMID:33316142   PMID:33335078   PMID:33592140   PMID:33687664   PMID:33706098   PMID:33711637   PMID:33841333   PMID:33903732   PMID:33916643   PMID:33961781   PMID:34061327  
PMID:34144151   PMID:34388365   PMID:34626148   PMID:34664251   PMID:34709177   PMID:34794738   PMID:35123491   PMID:35143942   PMID:35178856   PMID:35226658   PMID:35244538   PMID:35839271  
PMID:35871353   PMID:35894492   PMID:35931328   PMID:36076907   PMID:36109631   PMID:36191723   PMID:36208382   PMID:36279628   PMID:36334291   PMID:36402315   PMID:36455835   PMID:36572643  
PMID:36884100   PMID:37012401   PMID:37061938   PMID:37130271   PMID:37169743   PMID:37199804   PMID:37346158   PMID:37786383   PMID:37890652   PMID:38263257  


Genomics

Comparative Map Data
PGR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811101,029,624 - 101,129,813 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11101,029,624 - 101,129,813 (-)EnsemblGRCh38hg38GRCh38
GRCh3711100,900,355 - 101,000,544 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611100,414,313 - 100,506,465 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411100,414,312 - 100,506,465NCBI
Celera1198,069,715 - 98,169,894 (-)NCBICelera
Cytogenetic Map11q22.1NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBIHuRef
CHM1_111100,783,609 - 100,883,736 (-)NCBICHM1_1
T2T-CHM13v2.011101,039,187 - 101,139,328 (-)NCBIT2T-CHM13v2.0
Pgr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3998,890,017 - 8,968,612 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl98,899,834 - 8,968,612 (+)EnsemblGRCm39 Ensembl
GRCm3898,898,900 - 8,968,611 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl98,899,833 - 8,968,611 (+)EnsemblGRCm38mm10GRCm38
MGSCv3798,899,833 - 8,968,611 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3698,862,303 - 8,926,995 (+)NCBIMGSCv36mm8
Celera96,279,529 - 6,348,253 (+)NCBICelera
Cytogenetic Map9A1NCBI
cM Map92.46NCBI
Pgr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8814,354,398 - 14,413,271 (+)NCBIGRCr8
mRatBN7.286,072,673 - 6,131,552 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl86,072,673 - 6,131,344 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx810,003,167 - 10,062,099 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.088,300,792 - 8,359,726 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.086,329,892 - 6,388,768 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.087,128,656 - 7,187,796 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl87,128,656 - 7,187,796 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.087,113,895 - 7,172,761 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.485,784,717 - 5,845,901 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.185,784,716 - 5,845,901 (+)NCBI
Celera87,609,728 - 7,668,047 (+)NCBICelera
Cytogenetic Map8q11NCBI
Pgr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554124,643,839 - 4,693,478 (-)NCBIChiLan1.0ChiLan1.0
PGR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29101,848,679 - 101,939,634 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111102,925,904 - 103,028,120 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01195,997,677 - 96,098,866 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11199,508,571 - 99,598,020 (-)NCBIpanpan1.1PanPan1.1panPan2
PGR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.121447,197 - 552,511 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl21447,319 - 552,511 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha21461,376 - 566,187 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.021609,104 - 717,242 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl21609,104 - 742,638 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.121392,996 - 497,928 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.021478,480 - 583,792 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.021532,736 - 637,643 (+)NCBIUU_Cfam_GSD_1.0
Pgr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494784,948,508 - 85,038,416 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365516,498,553 - 6,573,222 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365516,498,553 - 6,573,212 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PGR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl932,035,684 - 32,129,221 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1932,035,684 - 32,129,776 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2936,044,789 - 36,138,540 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap9p13-p11NCBI
PGR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1192,420,970 - 92,519,128 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl192,430,453 - 92,517,296 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604333,353,079 - 33,447,583 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pgr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248781,714,559 - 1,762,421 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248781,714,196 - 1,769,302 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PGR
51 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11q14.1-22.3(chr11:78232836-106779420)x1 copy number loss See cases [RCV000052710] Chr11:78232836..106779420 [GRCh38]
Chr11:77943882..106650146 [GRCh37]
Chr11:77621530..106155356 [NCBI36]
Chr11:11q14.1-22.3
pathogenic
GRCh38/hg38 11q14.1-22.2(chr11:85242847-102920097)x1 copy number loss See cases [RCV000052711] Chr11:85242847..102920097 [GRCh38]
Chr11:84953891..102738968 [GRCh37]
Chr11:84631539..102296037 [NCBI36]
Chr11:11q14.1-22.2
pathogenic
GRCh38/hg38 11q22.1-25(chr11:100348599-135040246)x3 copy number gain See cases [RCV000053638] Chr11:100348599..135040246 [GRCh38]
Chr11:100219331..134910140 [GRCh37]
Chr11:99724541..134415350 [NCBI36]
Chr11:11q22.1-25
pathogenic
GRCh38/hg38 11q22.1-22.3(chr11:98357901-106059146)x1 copy number loss See cases [RCV000136574] Chr11:98357901..106059146 [GRCh38]
Chr11:98228629..105929873 [GRCh37]
Chr11:97733839..105435083 [NCBI36]
Chr11:11q22.1-22.3
pathogenic
GRCh38/hg38 11q14.3-22.3(chr11:91086659-109595582)x1 copy number loss See cases [RCV000138038] Chr11:91086659..109595582 [GRCh38]
Chr11:90819827..109466308 [GRCh37]
Chr11:90459475..108971518 [NCBI36]
Chr11:11q14.3-22.3
pathogenic
GRCh37/hg19 11q14.2-22.3(chr11:88152458-109414650)x1 copy number loss See cases [RCV000510457] Chr11:88152458..109414650 [GRCh37]
Chr11:11q14.2-22.3
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11q22.1-22.3(chr11:98515900-104970876)x1 copy number loss See cases [RCV000511844] Chr11:98515900..104970876 [GRCh37]
Chr11:11q22.1-22.3
likely pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11q13.4-23.3(chr11:71588805-116680918)x3 copy number gain not provided [RCV000683374] Chr11:71588805..116680918 [GRCh37]
Chr11:11q13.4-23.3
pathogenic
GRCh37/hg19 11q22.1(chr11:100507403-101123672)x3 copy number gain not provided [RCV000683343] Chr11:100507403..101123672 [GRCh37]
Chr11:11q22.1
likely benign
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11q14.1-23.2(chr11:80053454-113316236)x1 copy number loss not provided [RCV000737595] Chr11:80053454..113316236 [GRCh37]
Chr11:11q14.1-23.2
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
NM_000926.4(PGR):c.1575C>T (p.Tyr525=) single nucleotide variant not provided [RCV000914161] Chr11:101127496 [GRCh38]
Chr11:100998227 [GRCh37]
Chr11:11q22.1
likely benign
NM_000926.4(PGR):c.1323C>G (p.Ala441=) single nucleotide variant not provided [RCV000881637] Chr11:101127748 [GRCh38]
Chr11:100998479 [GRCh37]
Chr11:11q22.1
likely benign
NM_000926.4(PGR):c.223C>A (p.Gln75Lys) single nucleotide variant not provided [RCV000881915] Chr11:101128848 [GRCh38]
Chr11:100999579 [GRCh37]
Chr11:11q22.1
likely benign
NM_000926.4(PGR):c.2604G>A (p.Gln868=) single nucleotide variant not provided [RCV000948873] Chr11:101041987 [GRCh38]
Chr11:100912718 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.359C>T (p.Ala120Val) single nucleotide variant not provided [RCV000880422] Chr11:101128712 [GRCh38]
Chr11:100999443 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.789A>G (p.Gly263=) single nucleotide variant not provided [RCV000947376] Chr11:101128282 [GRCh38]
Chr11:100999013 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.1789+8C>T single nucleotide variant not provided [RCV000967860] Chr11:101125999 [GRCh38]
Chr11:100996730 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.152T>C (p.Ile51Thr) single nucleotide variant not provided [RCV000967235] Chr11:101128919 [GRCh38]
Chr11:100999650 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.1983C>T (p.Gly661=) single nucleotide variant not provided [RCV000895803] Chr11:101062676 [GRCh38]
Chr11:100933407 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.1951C>G (p.Leu651Val) single nucleotide variant not provided [RCV000893467] Chr11:101062708 [GRCh38]
Chr11:100933439 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.1040G>C (p.Cys347Ser) single nucleotide variant not provided [RCV000947375] Chr11:101128031 [GRCh38]
Chr11:100998762 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.612C>T (p.His204=) single nucleotide variant not provided [RCV000947377] Chr11:101128459 [GRCh38]
Chr11:100999190 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.549A>G (p.Lys183=) single nucleotide variant not provided [RCV000969798] Chr11:101128522 [GRCh38]
Chr11:100999253 [GRCh37]
Chr11:11q22.1
benign|likely benign
NM_000926.4(PGR):c.1305G>C (p.Gly435=) single nucleotide variant not provided [RCV000886012] Chr11:101127766 [GRCh38]
Chr11:100998497 [GRCh37]
Chr11:11q22.1
likely benign
NM_000926.4(PGR):c.156T>A (p.Pro52=) single nucleotide variant not provided [RCV000920021] Chr11:101128915 [GRCh38]
Chr11:100999646 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.561G>A (p.Arg187=) single nucleotide variant not provided [RCV000879815] Chr11:101128510 [GRCh38]
Chr11:100999241 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.147G>A (p.Ser49=) single nucleotide variant not provided [RCV000879816] Chr11:101128924 [GRCh38]
Chr11:100999655 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.1869C>A (p.Arg623=) single nucleotide variant not provided [RCV000950771] Chr11:101091797 [GRCh38]
Chr11:100962528 [GRCh37]
Chr11:11q22.1
benign
NM_000926.4(PGR):c.396C>A (p.Pro132=) single nucleotide variant not provided [RCV000916408] Chr11:101128675 [GRCh38]
Chr11:100999406 [GRCh37]
Chr11:11q22.1
likely benign
NM_000926.4(PGR):c.1607A>C (p.Gln536Pro) single nucleotide variant not provided [RCV000889694] Chr11:101127464 [GRCh38]
Chr11:100998195 [GRCh37]
Chr11:11q22.1
benign
GRCh37/hg19 11q22.1-22.3(chr11:98770072-104602846)x1 copy number loss not provided [RCV002472602] Chr11:98770072..104602846 [GRCh37]
Chr11:11q22.1-22.3
likely pathogenic
GRCh37/hg19 11q22.1-22.3(chr11:99059204-103281943)x3 copy number gain not provided [RCV002472738] Chr11:99059204..103281943 [GRCh37]
Chr11:11q22.1-22.3
uncertain significance
Single allele deletion Intellectual disability [RCV001293382] Chr11:118359328..118372573 [GRCh37]
Chr11:11p15.3-q23.3
pathogenic
NC_000011.9:g.(?_94153285)_(111965700_?)del deletion Ataxia-telangiectasia syndrome [RCV001389105] Chr11:94153285..111965700 [GRCh37]
Chr11:11q21-23.1
pathogenic
GRCh37/hg19 11q22.1(chr11:100183922-101781251)x3 copy number gain not provided [RCV001836562] Chr11:100183922..101781251 [GRCh37]
Chr11:11q22.1
uncertain significance
GRCh37/hg19 11q14.1-23.3(chr11:85422071-118022671)x1 copy number loss not provided [RCV001832892] Chr11:85422071..118022671 [GRCh37]
Chr11:11q14.1-23.3
uncertain significance
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 copy number gain MISSED ABORTION [RCV002282973] Chr11:32799481..134938470 [GRCh37]
Chr11:11p13-q25
pathogenic
NM_000926.4(PGR):c.2780C>A (p.Pro927His) single nucleotide variant Inborn genetic diseases [RCV002969001] Chr11:101039138 [GRCh38]
Chr11:100909869 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1472C>G (p.Pro491Arg) single nucleotide variant Inborn genetic diseases [RCV002836891] Chr11:101127599 [GRCh38]
Chr11:100998330 [GRCh37]
Chr11:11q22.1
uncertain significance
GRCh37/hg19 11q14.1-22.3(chr11:81478509-104667040)x1 copy number loss not provided [RCV002475722] Chr11:81478509..104667040 [GRCh37]
Chr11:11q14.1-22.3
pathogenic
NM_000926.4(PGR):c.2323A>G (p.Met775Val) single nucleotide variant Inborn genetic diseases [RCV002837224] Chr11:101051458 [GRCh38]
Chr11:100922189 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1343T>C (p.Val448Ala) single nucleotide variant Inborn genetic diseases [RCV002946409] Chr11:101127728 [GRCh38]
Chr11:100998459 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1271C>G (p.Pro424Arg) single nucleotide variant Inborn genetic diseases [RCV002977555] Chr11:101127800 [GRCh38]
Chr11:100998531 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1783A>G (p.Met595Val) single nucleotide variant Inborn genetic diseases [RCV002762724] Chr11:101126013 [GRCh38]
Chr11:100996744 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.490C>A (p.Leu164Ile) single nucleotide variant Inborn genetic diseases [RCV002757958] Chr11:101128581 [GRCh38]
Chr11:100999312 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1615C>T (p.Pro539Ser) single nucleotide variant Inborn genetic diseases [RCV002737637] Chr11:101127456 [GRCh38]
Chr11:100998187 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1184A>C (p.Glu395Ala) single nucleotide variant Inborn genetic diseases [RCV002706812] Chr11:101127887 [GRCh38]
Chr11:100998618 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1438T>G (p.Cys480Gly) single nucleotide variant Inborn genetic diseases [RCV002757368] Chr11:101127633 [GRCh38]
Chr11:100998364 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.385C>T (p.Pro129Ser) single nucleotide variant Inborn genetic diseases [RCV002987187] Chr11:101128686 [GRCh38]
Chr11:100999417 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1301C>G (p.Pro434Arg) single nucleotide variant Inborn genetic diseases [RCV002644911] Chr11:101127770 [GRCh38]
Chr11:100998501 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.782C>G (p.Ala261Gly) single nucleotide variant Inborn genetic diseases [RCV002915258] Chr11:101128289 [GRCh38]
Chr11:100999020 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.122C>T (p.Thr41Ile) single nucleotide variant Inborn genetic diseases [RCV002849767] Chr11:101128949 [GRCh38]
Chr11:100999680 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.691G>A (p.Glu231Lys) single nucleotide variant Inborn genetic diseases [RCV002836460] Chr11:101128380 [GRCh38]
Chr11:100999111 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.809A>G (p.Lys270Arg) single nucleotide variant Inborn genetic diseases [RCV002964136] Chr11:101128262 [GRCh38]
Chr11:100998993 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.332T>C (p.Leu111Pro) single nucleotide variant Inborn genetic diseases [RCV002813123] Chr11:101128739 [GRCh38]
Chr11:100999470 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.760G>C (p.Ala254Pro) single nucleotide variant Inborn genetic diseases [RCV002723862] Chr11:101128311 [GRCh38]
Chr11:100999042 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1231C>G (p.Pro411Ala) single nucleotide variant Inborn genetic diseases [RCV002723645] Chr11:101127840 [GRCh38]
Chr11:100998571 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.413G>A (p.Ser138Asn) single nucleotide variant Inborn genetic diseases [RCV002724713] Chr11:101128658 [GRCh38]
Chr11:100999389 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.29G>A (p.Arg10Gln) single nucleotide variant Inborn genetic diseases [RCV002656947] Chr11:101129042 [GRCh38]
Chr11:100999773 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1475G>T (p.Arg492Leu) single nucleotide variant Inborn genetic diseases [RCV003189522] Chr11:101127596 [GRCh38]
Chr11:100998327 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.830C>G (p.Ala277Gly) single nucleotide variant Inborn genetic diseases [RCV003220500] Chr11:101128241 [GRCh38]
Chr11:100998972 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1120T>G (p.Tyr374Asp) single nucleotide variant Inborn genetic diseases [RCV003188654] Chr11:101127951 [GRCh38]
Chr11:100998682 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.1244C>G (p.Pro415Arg) single nucleotide variant Inborn genetic diseases [RCV003308724] Chr11:101127827 [GRCh38]
Chr11:100998558 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.640C>G (p.Pro214Ala) single nucleotide variant Inborn genetic diseases [RCV003357554] Chr11:101128431 [GRCh38]
Chr11:100999162 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.85T>C (p.Cys29Arg) single nucleotide variant Inborn genetic diseases [RCV003360335] Chr11:101128986 [GRCh38]
Chr11:100999717 [GRCh37]
Chr11:11q22.1
uncertain significance
NM_000926.4(PGR):c.976G>A (p.Asp326Asn) single nucleotide variant Inborn genetic diseases [RCV003371470] Chr11:101128095 [GRCh38]
Chr11:100998826 [GRCh37]
Chr11:11q22.1
uncertain significance
GRCh37/hg19 11q21-22.3(chr11:97147292-102979905)x3 copy number gain not provided [RCV003484850] Chr11:97147292..102979905 [GRCh37]
Chr11:11q21-22.3
uncertain significance
NM_000926.4(PGR):c.933C>T (p.Leu311=) single nucleotide variant not provided [RCV003396033] Chr11:101128138 [GRCh38]
Chr11:100998869 [GRCh37]
Chr11:11q22.1
likely benign
GRCh37/hg19 11q22.1(chr11:100770764-101584390)x3 copy number gain not specified [RCV003986951] Chr11:100770764..101584390 [GRCh37]
Chr11:11q22.1
uncertain significance
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR126hsa-miR-126-3pMirtarbaseexternal_infoReporter assay;Western blotFunctional MTI21526342
MIR181A2hsa-miR-181a-5pOncomiRDBexternal_infoNANA22492871
MIR181A1hsa-miR-181a-5pOncomiRDBexternal_infoNANA22492871

Predicted Target Of
Summary Value
Count of predictions:3879
Count of miRNA genes:1270
Interacting mature miRNAs:1610
Transcripts:ENST00000263463, ENST00000325455, ENST00000526300, ENST00000528960, ENST00000530764, ENST00000533207, ENST00000534013, ENST00000534780
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
STS-X51730  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,909,108 - 100,909,236UniSTSGRCh37
Build 3611100,414,318 - 100,414,446RGDNCBI36
Celera1198,078,468 - 98,078,596RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,846,202 - 96,846,330UniSTS
GeneMap99-GB4 RH Map11339.44UniSTS
NCBI RH Map11859.9UniSTS
GDB:197856  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711101,000,563 - 101,001,066UniSTSGRCh37
Build 3611100,505,773 - 100,506,276RGDNCBI36
Celera1198,169,913 - 98,170,416RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,937,647 - 96,938,150UniSTS
G67471  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,996,685 - 100,996,983UniSTSGRCh37
Build 3611100,501,895 - 100,502,193RGDNCBI36
Celera1198,166,034 - 98,166,332RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,933,768 - 96,934,066UniSTS
G67472  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,962,322 - 100,962,731UniSTSGRCh37
Build 3611100,467,532 - 100,467,941RGDNCBI36
Celera1198,131,670 - 98,132,079RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,899,404 - 96,899,813UniSTS
G67473  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,921,994 - 100,922,398UniSTSGRCh37
Build 3611100,427,204 - 100,427,608RGDNCBI36
Celera1198,091,354 - 98,091,758RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,859,088 - 96,859,492UniSTS
G67474  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,912,531 - 100,912,879UniSTSGRCh37
Build 3611100,417,741 - 100,418,089RGDNCBI36
Celera1198,081,891 - 98,082,239RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,849,625 - 96,849,973UniSTS
G67475  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,909,738 - 100,910,077UniSTSGRCh37
Build 3611100,414,948 - 100,415,287RGDNCBI36
Celera1198,079,098 - 98,079,437RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,846,832 - 96,847,171UniSTS
PGR  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711100,999,791 - 100,999,930UniSTSGRCh37
Build 3611100,505,001 - 100,505,140RGDNCBI36
Celera1198,169,140 - 98,169,280RGD
Cytogenetic Map11q22-q23UniSTS
HuRef1196,936,874 - 96,937,014UniSTS
GeneMap99-GB4 RH Map11339.44UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 18 879 9 2 488 8 8 2 490 8 488
Low 1883 1260 1176 159 376 22 2636 1574 1494 216 796 1299 137 1125 1665 1 1
Below cutoff 391 577 436 377 647 351 1054 562 2119 129 72 152 27 79 633 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_016475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_000926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001202474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_073141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_073142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_073143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006718858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011542869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054369129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054369130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB084248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB085683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB085843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB085844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB085845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF016381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL137566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY212933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY382151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY382152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY525610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ234979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M15716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MK531625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X51730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000263463   ⟹   ENSP00000263463
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,039,116 - 101,129,070 (-)Ensembl
RefSeq Acc Id: ENST00000325455   ⟹   ENSP00000325120
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,029,624 - 101,129,813 (-)Ensembl
RefSeq Acc Id: ENST00000526300   ⟹   ENSP00000436803
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,039,116 - 101,129,070 (-)Ensembl
RefSeq Acc Id: ENST00000528960   ⟹   ENSP00000432914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,039,116 - 101,129,070 (-)Ensembl
RefSeq Acc Id: ENST00000530764
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,041,661 - 101,051,470 (-)Ensembl
RefSeq Acc Id: ENST00000533207
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,039,061 - 101,064,025 (-)Ensembl
RefSeq Acc Id: ENST00000534013   ⟹   ENSP00000436561
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,038,680 - 101,129,727 (-)Ensembl
RefSeq Acc Id: ENST00000534780   ⟹   ENSP00000432352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,039,116 - 101,129,070 (-)Ensembl
RefSeq Acc Id: ENST00000617858   ⟹   ENSP00000481227
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,049,934 - 101,129,813 (-)Ensembl
RefSeq Acc Id: ENST00000619228   ⟹   ENSP00000482698
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,049,953 - 101,129,813 (-)Ensembl
RefSeq Acc Id: ENST00000632634   ⟹   ENSP00000487607
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11101,062,569 - 101,127,088 (-)Ensembl
RefSeq Acc Id: NM_000926   ⟹   NP_000917
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,813 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)ENTREZGENE
Build 3611100,414,313 - 100,506,465 (-)NCBI Archive
HuRef1196,837,449 - 96,937,628 (-)ENTREZGENE
CHM1_111100,783,609 - 100,883,736 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,139,328 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001202474   ⟹   NP_001189403
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,063 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)ENTREZGENE
HuRef1196,837,449 - 96,937,628 (-)ENTREZGENE
CHM1_111100,783,609 - 100,882,985 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,138,577 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001271161   ⟹   NP_001258090
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,063 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBI
CHM1_111100,783,609 - 100,882,985 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,138,577 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001271162   ⟹   NP_001258091
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,813 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBI
CHM1_111100,783,609 - 100,883,650 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,139,328 (-)NCBI
Sequence:
RefSeq Acc Id: NR_073141
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,077 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBI
CHM1_111100,783,609 - 100,882,985 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,138,591 (-)NCBI
Sequence:
RefSeq Acc Id: NR_073142
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,077 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBI
CHM1_111100,783,609 - 100,882,985 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,138,591 (-)NCBI
Sequence:
RefSeq Acc Id: NR_073143
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,029,624 - 101,129,077 (-)NCBI
GRCh3711100,900,355 - 101,000,544 (-)NCBI
HuRef1196,837,449 - 96,937,628 (-)NCBI
CHM1_111100,783,609 - 100,882,985 (-)NCBI
T2T-CHM13v2.011101,039,187 - 101,138,591 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006718858   ⟹   XP_006718921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,041,974 - 101,129,813 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011542869   ⟹   XP_011541171
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,115,748 - 101,129,813 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054369129   ⟹   XP_054225104
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011101,051,537 - 101,139,328 (-)NCBI
RefSeq Acc Id: XM_054369130   ⟹   XP_054225105
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011101,112,349 - 101,139,328 (-)NCBI
Protein Sequences
Protein RefSeqs NP_000917 (Get FASTA)   NCBI Sequence Viewer  
  NP_001189403 (Get FASTA)   NCBI Sequence Viewer  
  NP_001258090 (Get FASTA)   NCBI Sequence Viewer  
  NP_001258091 (Get FASTA)   NCBI Sequence Viewer  
  XP_006718921 (Get FASTA)   NCBI Sequence Viewer  
  XP_011541171 (Get FASTA)   NCBI Sequence Viewer  
  XP_054225104 (Get FASTA)   NCBI Sequence Viewer  
  XP_054225105 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA60081 (Get FASTA)   NCBI Sequence Viewer  
  AAD01587 (Get FASTA)   NCBI Sequence Viewer  
  AAO61671 (Get FASTA)   NCBI Sequence Viewer  
  AAQ96833 (Get FASTA)   NCBI Sequence Viewer  
  AAQ96834 (Get FASTA)   NCBI Sequence Viewer  
  AAS00096 (Get FASTA)   NCBI Sequence Viewer  
  ABB72139 (Get FASTA)   NCBI Sequence Viewer  
  BAB91074 (Get FASTA)   NCBI Sequence Viewer  
  BAC06585 (Get FASTA)   NCBI Sequence Viewer  
  BAC11011 (Get FASTA)   NCBI Sequence Viewer  
  BAC11012 (Get FASTA)   NCBI Sequence Viewer  
  BAC11013 (Get FASTA)   NCBI Sequence Viewer  
  BAG65592 (Get FASTA)   NCBI Sequence Viewer  
  CAA36018 (Get FASTA)   NCBI Sequence Viewer  
  EAW66997 (Get FASTA)   NCBI Sequence Viewer  
  EAW66998 (Get FASTA)   NCBI Sequence Viewer  
  EAW66999 (Get FASTA)   NCBI Sequence Viewer  
  EAW67000 (Get FASTA)   NCBI Sequence Viewer  
  EAW67001 (Get FASTA)   NCBI Sequence Viewer  
  EAW67002 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000263463
  ENSP00000263463.5
  ENSP00000325120
  ENSP00000325120.5
  ENSP00000432352
  ENSP00000432352.1
  ENSP00000432914.1
  ENSP00000436561
  ENSP00000436561.1
  ENSP00000436803.1
  ENSP00000482698.1
  ENSP00000487607.1
GenBank Protein P06401 (Get FASTA)   NCBI Sequence Viewer  
  QCI62390 (Get FASTA)   NCBI Sequence Viewer  
  QCI62391 (Get FASTA)   NCBI Sequence Viewer  
  QCI62392 (Get FASTA)   NCBI Sequence Viewer  
  QCI62393 (Get FASTA)   NCBI Sequence Viewer  
  QCI62394 (Get FASTA)   NCBI Sequence Viewer  
  QCI62395 (Get FASTA)   NCBI Sequence Viewer  
  QCI62396 (Get FASTA)   NCBI Sequence Viewer  
  QCI62397 (Get FASTA)   NCBI Sequence Viewer  
  QCI62398 (Get FASTA)   NCBI Sequence Viewer  
  QCI62399 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_000917   ⟸   NM_000926
- Peptide Label: isoform B
- UniProtKB: Q8TDS3 (UniProtKB/Swiss-Prot),   B4E3T0 (UniProtKB/Swiss-Prot),   A7X8B0 (UniProtKB/Swiss-Prot),   A7LQ08 (UniProtKB/Swiss-Prot),   Q9UPF7 (UniProtKB/Swiss-Prot),   P06401 (UniProtKB/Swiss-Prot),   Q8NG42 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001189403   ⟸   NM_001202474
- Peptide Label: isoform A
- UniProtKB: P06401 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001258091   ⟸   NM_001271162
- Peptide Label: isoform D
- UniProtKB: P06401 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001258090   ⟸   NM_001271161
- Peptide Label: isoform C
- UniProtKB: P06401 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006718921   ⟸   XM_006718858
- Peptide Label: isoform X1
- UniProtKB: Q8NG42 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011541171   ⟸   XM_011542869
- Peptide Label: isoform X2
- UniProtKB: Q8NG43 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000436561   ⟸   ENST00000534013
RefSeq Acc Id: ENSP00000432352   ⟸   ENST00000534780
RefSeq Acc Id: ENSP00000325120   ⟸   ENST00000325455
RefSeq Acc Id: ENSP00000481227   ⟸   ENST00000617858
RefSeq Acc Id: ENSP00000436803   ⟸   ENST00000526300
RefSeq Acc Id: ENSP00000482698   ⟸   ENST00000619228
RefSeq Acc Id: ENSP00000263463   ⟸   ENST00000263463
RefSeq Acc Id: ENSP00000487607   ⟸   ENST00000632634
RefSeq Acc Id: ENSP00000432914   ⟸   ENST00000528960
RefSeq Acc Id: XP_054225104   ⟸   XM_054369129
- Peptide Label: isoform X1
- UniProtKB: Q8NG42 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054225105   ⟸   XM_054369130
- Peptide Label: isoform X2
- UniProtKB: Q8NG43 (UniProtKB/TrEMBL)
Protein Domains
NR LBD   Nuclear receptor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P06401-F1-model_v2 AlphaFold P06401 1-933 view protein structure

Promoters
RGD ID:6789238
Promoter ID:HG_KWN:14021
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:UC001PGI.2,   UC001PGJ.2,   UC009YWW.1,   UC009YWX.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3611100,503,391 - 100,505,592 (-)MPROMDB
RGD ID:7221881
Promoter ID:EPDNEW_H16687
Type:initiation region
Name:PGR_1
Description:progesterone receptor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H16688  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,129,053 - 101,129,113EPDNEW
RGD ID:7221887
Promoter ID:EPDNEW_H16688
Type:multiple initiation site
Name:PGR_2
Description:progesterone receptor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H16687  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811101,129,813 - 101,129,873EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:8910 AgrOrtholog
COSMIC PGR COSMIC
Ensembl Genes ENSG00000082175 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000263463 ENTREZGENE
  ENST00000263463.9 UniProtKB/Swiss-Prot
  ENST00000325455 ENTREZGENE
  ENST00000325455.10 UniProtKB/Swiss-Prot
  ENST00000526300.5 UniProtKB/TrEMBL
  ENST00000528960.5 UniProtKB/TrEMBL
  ENST00000534013 ENTREZGENE
  ENST00000534013.5 UniProtKB/Swiss-Prot
  ENST00000534780 ENTREZGENE
  ENST00000534780.5 UniProtKB/TrEMBL
  ENST00000619228.2 UniProtKB/TrEMBL
  ENST00000632634.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000082175 GTEx
HGNC ID HGNC:8910 ENTREZGENE
Human Proteome Map PGR Human Proteome Map
InterPro NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Progest_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:5241 UniProtKB/Swiss-Prot
NCBI Gene 5241 ENTREZGENE
OMIM 607311 OMIM
PANTHER KNIRPS-RELATED PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROGESTERONE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prog_receptor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA266 PharmGKB
PRINTS PROGESTRONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0J9YVP1_HUMAN UniProtKB/TrEMBL
  A0A4P8D7F0_HUMAN UniProtKB/TrEMBL
  A7LQ08 ENTREZGENE
  A7X8B0 ENTREZGENE
  B4E3T0 ENTREZGENE
  P06401 ENTREZGENE, UniProtKB/Swiss-Prot
  Q8NG42 ENTREZGENE, UniProtKB/TrEMBL
  Q8NG43 ENTREZGENE, UniProtKB/TrEMBL
  Q8NG44_HUMAN UniProtKB/TrEMBL
  Q8NG45_HUMAN UniProtKB/TrEMBL
  Q8TDS3 ENTREZGENE
  Q9UPF7 ENTREZGENE
UniProt Secondary A7LQ08 UniProtKB/Swiss-Prot
  A7X8B0 UniProtKB/Swiss-Prot
  B4E3T0 UniProtKB/Swiss-Prot
  Q8TDS3 UniProtKB/Swiss-Prot
  Q9UPF7 UniProtKB/Swiss-Prot