Akap13 (A-kinase anchoring protein 13) - Rat Genome Database

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Gene: Akap13 (A-kinase anchoring protein 13) Rattus norvegicus
Analyze
Symbol: Akap13
Name: A-kinase anchoring protein 13
RGD ID: 727893
Description: Enables MAP-kinase scaffold activity. Involved in several processes, including adrenergic receptor signaling pathway; cell growth involved in cardiac muscle cell development; and positive regulation of canonical NF-kappaB signal transduction. Located in perinuclear region of cytoplasm. Orthologous to human AKAP13 (A-kinase anchoring protein 13); PARTICIPATES IN protein kinase A (PKA) signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A kinase (PRKA) anchor protein 13; A-kinase anchor protein 13; AKAP-13; AKAP-Lbc; LOC293024; protein kinase A anchoring protein Rt31
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81138,722,445 - 139,029,401 (+)NCBIGRCr8
mRatBN7.21129,313,183 - 129,619,647 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1137,232,876 - 137,538,333 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01144,403,105 - 144,708,592 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01137,289,702 - 137,597,080 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01137,089,558 - 137,315,272 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1137,014,272 - 137,315,272 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01138,007,112 - 138,312,524 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,052,674 - 131,360,512 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11131,302,912 - 131,380,987 (+)NCBI
Celera1121,422,303 - 121,727,463 (+)NCBICelera
Cytogenetic Map1q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acrolein  (ISO)
alpha-pinene  (ISO)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-hexachlorocyclohexane  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
caffeine  (ISO)
camptothecin  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
cobalt dichloride  (ISO)
colforsin daropate hydrochloride  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (ISO)
dibutyl phthalate  (EXP,ISO)
dicrotophos  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fenvalerate  (EXP)
fipronil  (EXP)
folic acid  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
gallic acid  (ISO)
gentamycin  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
hexadecanoic acid  (ISO)
inulin  (ISO)
iron atom  (EXP)
iron(0)  (EXP)
isoprenaline  (ISO)
methamphetamine  (ISO)
methidathion  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
rac-lactic acid  (ISO)
rotenone  (EXP)
selenium atom  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
testosterone enanthate  (ISO)
tetraphene  (ISO)
topotecan  (EXP)
triphenyl phosphate  (EXP)
triptonide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
versicolorin A  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. A-kinase anchoring proteins: from protein complexes to physiology and disease. Carnegie GK, etal., IUBMB Life. 2009 Apr;61(4):394-406.
2. AKAP-Lbc mobilizes a cardiac hypertrophy signaling pathway. Carnegie GK, etal., Mol Cell. 2008 Oct 24;32(2):169-79.
3. A-kinase-anchoring protein-Lbc anchors IkappaB kinase beta to support interleukin-6-mediated cardiomyocyte hypertrophy. del Vescovo CD, etal., Mol Cell Biol. 2013 Jan;33(1):14-27. doi: 10.1128/MCB.00887-12. Epub 2012 Oct 22.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Ht31: the first protein kinase A anchoring protein to integrate protein kinase A and Rho signaling. Klussmann E, etal., FEBS Lett 2001 Nov 2;507(3):264-8.
6. The Rho guanine nucleotide exchange factor AKAP13 (BRX) is essential for cardiac development in mice. Mayers CM, etal., J Biol Chem. 2010 Apr 16;285(16):12344-54. doi: 10.1074/jbc.M110.106856. Epub 2010 Feb 5.
7. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
8. A-kinase anchoring protein Lbc coordinates a p38 activating signaling complex controlling compensatory cardiac hypertrophy. Perez Lopez I, etal., Mol Cell Biol. 2013 Aug;33(15):2903-17. doi: 10.1128/MCB.00031-13. Epub 2013 May 28.
9. GOA pipeline RGD automated data pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Localized effects of cAMP mediated by distinct routes of protein kinase A. Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.
Additional References at PubMed
PMID:1731775   PMID:11546812   PMID:16469733   PMID:19946888   PMID:21224381   PMID:24269843   PMID:25186459   PMID:25892096  


Genomics

Comparative Map Data
Akap13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81138,722,445 - 139,029,401 (+)NCBIGRCr8
mRatBN7.21129,313,183 - 129,619,647 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1137,232,876 - 137,538,333 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01144,403,105 - 144,708,592 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01137,289,702 - 137,597,080 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01137,089,558 - 137,315,272 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1137,014,272 - 137,315,272 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01138,007,112 - 138,312,524 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,052,674 - 131,360,512 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11131,302,912 - 131,380,987 (+)NCBI
Celera1121,422,303 - 121,727,463 (+)NCBICelera
Cytogenetic Map1q31NCBI
AKAP13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381585,380,603 - 85,749,358 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1585,380,571 - 85,749,358 (+)EnsemblGRCh38hg38GRCh38
GRCh371585,923,834 - 86,292,589 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361583,724,875 - 84,093,590 (+)NCBINCBI36Build 36hg18NCBI36
Build 341584,021,271 - 84,093,590NCBI
Celera1562,323,846 - 62,692,414 (+)NCBICelera
Cytogenetic Map15q25.3NCBI
HuRef1561,986,401 - 62,354,887 (+)NCBIHuRef
CHM1_11585,765,298 - 86,134,016 (+)NCBICHM1_1
T2T-CHM13v2.01583,132,647 - 83,501,376 (+)NCBIT2T-CHM13v2.0
Akap13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39775,105,271 - 75,404,357 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl775,105,282 - 75,404,357 (+)EnsemblGRCm39 Ensembl
GRCm38775,455,526 - 75,754,609 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl775,455,534 - 75,754,609 (+)EnsemblGRCm38mm10GRCm38
MGSCv37782,600,420 - 82,899,495 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36775,328,812 - 75,628,122 (+)NCBIMGSCv36mm8
Celera772,913,871 - 73,205,960 (+)NCBICelera
Cytogenetic Map7D1NCBI
cM Map743.76NCBI
Akap13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541619,009,485 - 19,247,626 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541619,006,206 - 19,327,523 (-)NCBIChiLan1.0ChiLan1.0
AKAP13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21674,930,726 - 75,292,650 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11578,635,626 - 78,997,324 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01564,076,422 - 64,438,109 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11583,289,867 - 83,651,362 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1583,387,667 - 83,651,362 (+)Ensemblpanpan1.1panPan2
AKAP13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1349,076,313 - 49,310,564 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl349,076,642 - 49,308,221 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha351,631,494 - 51,952,108 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0349,413,000 - 49,733,699 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl349,412,925 - 49,729,970 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1348,911,383 - 49,227,381 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0349,139,636 - 49,460,216 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0349,485,435 - 49,806,458 (+)NCBIUU_Cfam_GSD_1.0
Akap13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640134,357,191 - 134,672,629 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648311,661,862 - 11,977,292 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1787,889,384 - 88,222,854 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2794,486,955 - 94,583,014 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1294,009,921 - 4,364,226 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl294,106,732 - 4,359,516 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605942,653,071 - 43,006,115 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akap13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476812,765,723 - 13,095,136 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476812,767,120 - 13,099,288 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Akap13
1228 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:496
Count of miRNA genes:250
Interacting mature miRNAs:297
Transcripts:ENSRNOT00000014802
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)187580395150700247Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1300153Bp171Blood pressure QTL 1713.37arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)190664883143200202Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192184926137184926Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)192948896144267916Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
61346Rf2Renal disease susceptibility QTL 23.7urine protein amount (VT:0005160)urine protein level (CMO:0000591)199267916144267916Rat
61399Tcat1Tongue tumor resistance QTL 13.3tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)199267916144267916Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
2303591Gluco41Glucose level QTL 412blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1102168504147168504Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1102268556147268556Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1102813953151162766Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1103111621148111621Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1103111621148111621Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1106047847151047847Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1118944747163944747Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
631570Bp94Blood pressure QTL 940.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123479780142990467Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat

Markers in Region
D1Rat183  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,384,185 - 129,384,427 (+)MAPPERmRatBN7.2
Rnor_6.01137,083,889 - 137,084,126NCBIRnor6.0
Rnor_5.01138,077,032 - 138,077,269UniSTSRnor5.0
RGSC_v3.41131,123,181 - 131,123,541RGDRGSC3.4
RGSC_v3.41131,123,213 - 131,123,450UniSTSRGSC3.4
RGSC_v3.11131,201,556 - 131,201,793RGD
Celera1121,492,017 - 121,492,254UniSTS
RH 3.4 Map11020.0RGD
RH 3.4 Map11020.0UniSTS
RH 2.0 Map1667.4RGD
SHRSP x BN Map165.46RGD
Cytogenetic Map1q31UniSTS
BE120782  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,614,572 - 129,614,746 (+)MAPPERmRatBN7.2
Rnor_6.01137,310,199 - 137,310,372NCBIRnor6.0
Rnor_5.01138,307,450 - 138,307,623UniSTSRnor5.0
RGSC_v3.41131,355,439 - 131,355,612UniSTSRGSC3.4
Celera1121,722,390 - 121,722,563UniSTS
RH 3.4 Map11012.3UniSTS
Cytogenetic Map1q31UniSTS
BE118168  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,596,771 - 129,596,951 (+)MAPPERmRatBN7.2
Rnor_6.01137,292,400 - 137,292,579NCBIRnor6.0
Rnor_5.01138,289,651 - 138,289,830UniSTSRnor5.0
RGSC_v3.41131,337,640 - 131,337,819UniSTSRGSC3.4
Celera1121,704,595 - 121,704,774UniSTS
RH 3.4 Map11011.4UniSTS
Cytogenetic Map1q31UniSTS
AI406405  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,477,465 - 129,477,615 (+)MAPPERmRatBN7.2
Rnor_6.01137,173,207 - 137,173,356NCBIRnor6.0
Rnor_5.01138,170,458 - 138,170,607UniSTSRnor5.0
RGSC_v3.41131,218,653 - 131,218,802UniSTSRGSC3.4
Celera1121,585,318 - 121,585,467UniSTS
RH 3.4 Map11021.5UniSTS
Cytogenetic Map1q31UniSTS
AU048734  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21129,467,575 - 129,467,836 (+)MAPPERmRatBN7.2
Rnor_6.01137,163,313 - 137,163,573NCBIRnor6.0
Rnor_5.01138,160,564 - 138,160,824UniSTSRnor5.0
Cytogenetic Map1q31UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 42 32 16 19 16 8 11 29 34 35 11 8
Low 1 25 25 25 45 1 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039105591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063284572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF387102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000014802   ⟹   ENSRNOP00000014802
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
Rnor_6.0 Ensembl1137,014,272 - 137,315,272 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000095963   ⟹   ENSRNOP00000078206
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000099409   ⟹   ENSRNOP00000077560
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,566,293 - 129,569,134 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000101691   ⟹   ENSRNOP00000088819
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000103755   ⟹   ENSRNOP00000086170
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,417,750 - 129,619,646 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000108771   ⟹   ENSRNOP00000076907
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1129,314,402 - 129,619,646 (+)Ensembl
RefSeq Acc Id: NM_001106271   ⟹   NP_001099741
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,724,150 - 139,029,401 (+)NCBI
mRatBN7.21129,314,402 - 129,619,647 (+)NCBI
Rnor_6.01137,089,558 - 137,315,272 (+)NCBI
Rnor_5.01138,007,112 - 138,312,524 (+)NCBI
RGSC_v3.41131,052,674 - 131,360,512 (+)RGD
Celera1121,422,303 - 121,727,463 (+)RGD
Sequence:
RefSeq Acc Id: XM_039105531   ⟹   XP_038961459
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105541   ⟹   XP_038961469
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105543   ⟹   XP_038961471
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105547   ⟹   XP_038961475
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105548   ⟹   XP_038961476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105549   ⟹   XP_038961477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105554   ⟹   XP_038961482
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,184 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105560   ⟹   XP_038961488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,184 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105567   ⟹   XP_038961495
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
mRatBN7.21129,313,183 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105573   ⟹   XP_038961501
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,724,318 - 139,029,401 (+)NCBI
mRatBN7.21129,314,559 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105578   ⟹   XP_038961506
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,870,661 - 139,029,401 (+)NCBI
mRatBN7.21129,464,038 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105585   ⟹   XP_038961513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,862,810 - 139,029,401 (+)NCBI
mRatBN7.21129,453,064 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105587   ⟹   XP_038961515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,890,485 - 139,029,401 (+)NCBI
mRatBN7.21129,480,729 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105588   ⟹   XP_038961516
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,555 - 139,029,401 (+)NCBI
mRatBN7.21129,511,777 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_039105591   ⟹   XP_038961519
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,555 - 139,029,401 (+)NCBI
mRatBN7.21129,511,776 - 129,619,647 (+)NCBI
RefSeq Acc Id: XM_063284528   ⟹   XP_063140598
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284529   ⟹   XP_063140599
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,722,445 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284552   ⟹   XP_063140622
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,489 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284555   ⟹   XP_063140625
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,447 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284557   ⟹   XP_063140627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,556 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284561   ⟹   XP_063140631
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,921,554 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284569   ⟹   XP_063140639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,973,431 - 139,029,401 (+)NCBI
RefSeq Acc Id: XM_063284572   ⟹   XP_063140642
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81138,973,431 - 139,029,401 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001099741 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961459 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961475 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961476 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961477 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961482 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961488 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961495 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961506 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961513 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961515 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961516 (Get FASTA)   NCBI Sequence Viewer  
  XP_038961519 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140598 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140599 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140622 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140625 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140627 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140631 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140639 (Get FASTA)   NCBI Sequence Viewer  
  XP_063140642 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAL40924 (Get FASTA)   NCBI Sequence Viewer  
  EDM08536 (Get FASTA)   NCBI Sequence Viewer  
  EDM08537 (Get FASTA)   NCBI Sequence Viewer  
  EDM08538 (Get FASTA)   NCBI Sequence Viewer  
  EDM08539 (Get FASTA)   NCBI Sequence Viewer  
  EDM08540 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000014802
  ENSRNOP00000014802.7
  ENSRNOP00000076907
  ENSRNOP00000076907.1
  ENSRNOP00000077560.1
  ENSRNOP00000078206
  ENSRNOP00000078206.1
  ENSRNOP00000086170
  ENSRNOP00000086170.1
  ENSRNOP00000088819
  ENSRNOP00000088819.1
GenBank Protein F1M3G7 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001099741   ⟸   NM_001106271
- UniProtKB: Q8VHU6 (UniProtKB/Swiss-Prot),   F1M3G7 (UniProtKB/TrEMBL),   A0A8I6GDR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000014802   ⟸   ENSRNOT00000014802
RefSeq Acc Id: XP_038961459   ⟸   XM_039105531
- Peptide Label: isoform X1
- UniProtKB: A0A8L2Q7A1 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961471   ⟸   XM_039105543
- Peptide Label: isoform X3
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961469   ⟸   XM_039105541
- Peptide Label: isoform X2
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961476   ⟸   XM_039105548
- Peptide Label: isoform X5
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961475   ⟸   XM_039105547
- Peptide Label: isoform X4
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961477   ⟸   XM_039105549
- Peptide Label: isoform X8
- UniProtKB: A0A8I6AJL6 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961495   ⟸   XM_039105567
- Peptide Label: isoform X11
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961482   ⟸   XM_039105554
- Peptide Label: isoform X9
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961488   ⟸   XM_039105560
- Peptide Label: isoform X10
- UniProtKB: A0A8I5XVJ8 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961501   ⟸   XM_039105573
- Peptide Label: isoform X1
- UniProtKB: A0A8L2Q7A1 (UniProtKB/TrEMBL),   A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961513   ⟸   XM_039105585
- Peptide Label: isoform X13
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961506   ⟸   XM_039105578
- Peptide Label: isoform X12
- UniProtKB: A0A8I5Y2J4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038961515   ⟸   XM_039105587
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038961519   ⟸   XM_039105591
- Peptide Label: isoform X19
RefSeq Acc Id: XP_038961516   ⟸   XM_039105588
- Peptide Label: isoform X15
RefSeq Acc Id: ENSRNOP00000088819   ⟸   ENSRNOT00000101691
RefSeq Acc Id: ENSRNOP00000086170   ⟸   ENSRNOT00000103755
RefSeq Acc Id: ENSRNOP00000076907   ⟸   ENSRNOT00000108771
RefSeq Acc Id: ENSRNOP00000078206   ⟸   ENSRNOT00000095963
RefSeq Acc Id: ENSRNOP00000077560   ⟸   ENSRNOT00000099409
RefSeq Acc Id: XP_063140598   ⟸   XM_063284528
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063140599   ⟸   XM_063284529
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063140625   ⟸   XM_063284555
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063140622   ⟸   XM_063284552
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063140631   ⟸   XM_063284561
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063140627   ⟸   XM_063284557
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063140639   ⟸   XM_063284569
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063140642   ⟸   XM_063284572
- Peptide Label: isoform X22
Protein Domains
DH   PH   Phorbol-ester/DAG-type

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:727893 AgrOrtholog
BioCyc Gene G2FUF-58864 BioCyc
Ensembl Genes ENSRNOG00000010964 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000014802.7 UniProtKB/TrEMBL
  ENSRNOT00000095963.1 UniProtKB/TrEMBL
  ENSRNOT00000099409.1 UniProtKB/TrEMBL
  ENSRNOT00000101691.1 UniProtKB/TrEMBL
  ENSRNOT00000103755 ENTREZGENE
  ENSRNOT00000103755.1 UniProtKB/TrEMBL
  ENSRNOT00000108771.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.900.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.60.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DBL_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PE/DAG-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PH_16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_dom-like UniProtKB/Swiss-Prot
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:293024 UniProtKB/Swiss-Prot
NCBI Gene 293024 ENTREZGENE
PANTHER AGAP007712-PA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13944:SF18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PH_16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Akap13 PhenoGen
PROSITE DH_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010964 RatGTEx
SMART RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00109 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48065 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57889 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5XVJ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y2J4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZJI7_RAT UniProtKB/TrEMBL
  A0A8I6AJL6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GDR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2Q7A1 ENTREZGENE, UniProtKB/TrEMBL
  A6JC11_RAT UniProtKB/TrEMBL
  A6JC12_RAT UniProtKB/TrEMBL
  A6JC13_RAT UniProtKB/TrEMBL
  AKP13_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q8VHU6 ENTREZGENE
UniProt Secondary Q8VHU6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-25 Akap13  A-kinase anchoring protein 13  Akap13  A kinase (PRKA) anchor protein 13  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-11 Akap13  A kinase (PRKA) anchor protein 13  LOC293024  protein kinase A anchoring protein Rt31  Symbol and Name updated to reflect Human and Mouse nomenclature 625702 APPROVED