Mustn1 (musculoskeletal, embryonic nuclear protein 1)

Gene: Mustn1 (musculoskeletal, embryonic nuclear protein 1) Rattus norvegicus

Analyze

Symbol:

Mustn1

Name:

musculoskeletal, embryonic nuclear protein 1

RGD ID:

727804

Description:

Involved in embryonic limb morphogenesis and tissue regeneration. Located in nucleoplasm. Orthologous to human MUSTN1 (musculoskeletal, embryonic nuclear protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

fracture callus protein MUSTANG; musculoskeletal embryonic nuclear protein 1; musculoskeletal temporally activated novel gene protein; Mustang

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	6,079,355 - 6,081,608 (+)	NCBI		GRCr8
mRatBN7.2	16	6,072,908 - 6,075,161 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	6,072,833 - 6,075,161 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	6,084,491 - 6,086,741 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	7,229,947 - 7,232,197 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	6,091,596 - 6,093,847 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	6,962,737 - 6,964,987 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	6,962,722 - 6,964,989 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	6,889,473 - 6,891,723 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	6,311,978 - 6,314,228 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	6,311,975 - 6,314,226 (+)	NCBI
Celera	16	9,114,915 - 9,117,165 (-)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

congenital disorder of glycosylation In (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

Aroclor 1254 (ISO)

atrazine (ISO)

benzo[a]pyrene (EXP,ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

cadmium dichloride (EXP)

carbon nanotube (ISO)

chlordecone (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (ISO)

copper atom (EXP)

copper(0) (EXP)

corticosterone (EXP)

decabromodiphenyl ether (ISO)

dibenz[a,h]anthracene (ISO)

dioxygen (EXP)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

epoxiconazole (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (EXP)

genistein (ISO)

gentamycin (EXP)

isoprenaline (ISO)

L-methionine (ISO)

lead diacetate (EXP)

nitrofen (EXP)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

phenobarbital (ISO)

phenylephrine (EXP)

phenylmercury acetate (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

Soman (EXP)

succimer (ISO)

tamoxifen (ISO)

thioacetamide (EXP)

trichostatin A (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chondrocyte differentiation (IEA)

chondrocyte proliferation (IEA)

embryonic limb morphogenesis (IEP)

positive regulation of chondrocyte differentiation (ISO)

positive regulation of chondrocyte proliferation (ISO)

positive regulation of gene expression (ISO)

positive regulation of myoblast differentiation (ISS)

positive regulation of proteoglycan biosynthetic process (ISO)

tissue regeneration (IDA,IEA)

Cellular Component

nucleoplasm (IDA)

nucleus (IDA,IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Molecular cloning and characterization of Mustang, a novel nuclear protein expressed during skeletal development and regeneration.	Lombardo F, etal., FASEB J 2004 Jan;18(1):52-61.
2.	NCBI rat LocusLink and RefSeq merged data October 15, 2003	NCBI rat LocusLink and RefSeq merged data October 15, 2003
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19410023

Genomics

Comparative Map Data

Mustn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	6,079,355 - 6,081,608 (+)	NCBI		GRCr8
mRatBN7.2	16	6,072,908 - 6,075,161 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	6,072,833 - 6,075,161 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	6,084,491 - 6,086,741 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	7,229,947 - 7,232,197 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	6,091,596 - 6,093,847 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	6,962,737 - 6,964,987 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	6,962,722 - 6,964,989 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	6,889,473 - 6,891,723 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	6,311,978 - 6,314,228 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	6,311,975 - 6,314,226 (+)	NCBI
Celera	16	9,114,915 - 9,117,165 (-)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

MUSTN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	52,833,121 - 52,835,019 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	52,833,114 - 52,835,019 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	52,867,137 - 52,869,035 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	52,842,177 - 52,844,260 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	52,845,956 - 52,848,039 (-)	NCBI		Celera
Cytogenetic Map	3	p21.1	NCBI
HuRef	3	52,928,926 - 52,931,042 (-)	NCBI		HuRef
CHM1_1	3	52,819,330 - 52,821,434 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	52,866,132 - 52,868,037 (-)	NCBI		T2T-CHM13v2.0

Mustn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	30,601,214 - 30,603,567 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	30,601,157 - 30,603,567 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	30,879,257 - 30,881,610 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	30,879,200 - 30,881,610 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	31,692,443 - 31,694,796 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	29,708,549 - 29,710,617 (+)	NCBI		MGSCv36	mm8
Celera	14	27,136,627 - 27,138,980 (+)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	19.09	NCBI

Mustn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	2,790,090 - 2,793,880 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	2,790,090 - 2,793,880 (-)	NCBI	ChiLan1.0	ChiLan1.0

MUSTN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	52,827,935 - 52,830,946 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	52,832,886 - 52,835,718 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	52,774,843 - 52,778,280 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	54,000,547 - 54,004,099 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	54,000,547 - 54,004,099 (-)	Ensembl	panpan1.1		panPan2

MUSTN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	20	36,976,074 - 36,981,907 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	37,319,303 - 37,350,672 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	37,344,915 - 37,352,128 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	20	37,116,837 - 37,122,681 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	37,394,372 - 37,400,213 (+)	NCBI		UU_Cfam_GSD_1.0

Mustn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	170,453,686 - 170,455,950 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	3,592,253 - 3,594,329 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	3,592,259 - 3,594,717 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MUSTN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	14,215,968 - 14,219,524 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666041	152,678,397 - 152,684,347 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mustn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624822	4,390,682 - 4,395,494 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624822	4,388,562 - 4,395,494 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Mustn1
8 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	67
Count of miRNA genes:	53
Interacting mature miRNAs:	61
Transcripts:	ENSRNOT00000023330
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357403	Slep4	Serum leptin concentration QTL 4	3.91		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	9639137	Rat
1600369	Hcas8	Hepatocarcinoma susceptibility QTL 8			liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	16	1	22477621	Rat
631830	Alc7	Alcohol consumption QTL 7	2.9		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	1	26727669	Rat
634355	Rends4	Renal damage susceptibility QTL 4		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	16	1	26727669	Rat
1582235	Insul8	Insulin level QTL 8	3.3	0.0063	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	16	1	26727669	Rat
9590151	Scort8	Serum corticosterone level QTL 8	8.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	16	1	30836262	Rat
2302380	Slep6	Serum leptin concentration QTL 6	3.36		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	32139025	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33418960	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39533930	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39533930	Rat
631561	Hcuc2	Hepatic copper content QTL 2	2.8		liver copper amount (VT:0003065)	liver total copper weight (CMO:0001507)	16	1	39533949	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	1	43534949	Rat
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	1	44588133	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	44977551	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	832236	46053497	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	832236	59492508	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	832236	59492508	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	832236	59492508	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	832236	59492508	Rat
2301406	Kidm39	Kidney mass QTL 39		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	16	2851709	15884239	Rat
1300133	Rf24	Renal function QTL 24	3.64		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	16	3380150	21361552	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3380150	43025077	Rat
737825	Alc13	Alcohol consumption QTL 13	4.5		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	16039848	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	16	4227609	43025077	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	4227609	43025077	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4227609	43025077	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4227609	46975965	Rat
61405	Niddm6	Non-insulin dependent diabetes mellitus QTL 6	3.66	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	16	4227609	48972724	Rat
61338	Bp23	Blood pressure QTL 23	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	4227609	49227609	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	60252231	Rat
61372	Bp40	Blood pressure QTL 40	2.2		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	16	4227730	17696785	Rat

Markers in Region

RH137189

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	6,074,956 - 6,075,136 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	6,964,786 - 6,964,965	NCBI	Rnor6.0
Rnor_5.0	16	6,891,522 - 6,891,701	UniSTS	Rnor5.0
RGSC_v3.4	16	6,314,027 - 6,314,206	UniSTS	RGSC3.4
Celera	16	9,114,937 - 9,115,116	UniSTS
RH 3.4 Map	16	46.3	UniSTS
Cytogenetic Map	16	p16	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	3			1		8	11	12		16	11	8
Low		40	57	41	18	41			62	35	25
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_181368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY254906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ219994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ222444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000023330 ⟹ ENSRNOP00000023330

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	6,072,833 - 6,075,161 (+)	Ensembl
Rnor_6.0 Ensembl	16	6,962,722 - 6,964,989 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000115791 ⟹ ENSRNOP00000091781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	6,072,833 - 6,075,161 (+)	Ensembl

RefSeq Acc Id:

NM_181368 ⟹ NP_852033

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	6,079,355 - 6,081,608 (+)	NCBI
mRatBN7.2	16	6,072,908 - 6,075,161 (+)	NCBI
Rnor_6.0	16	6,962,737 - 6,964,987 (+)	NCBI
Rnor_5.0	16	6,889,473 - 6,891,723 (+)	NCBI
RGSC_v3.4	16	6,311,978 - 6,314,228 (+)	RGD
Celera	16	9,114,915 - 9,117,165 (-)	RGD

Sequence:

show sequence

GAGCAGCTGTCCCGAGATACGGGATACCCCCTGTCCATCTGCTCTCCCCAGGGTGGCTGCCCAT
CATGTCCAAGAATAAACTCCAGCTAGTCCCTGCGTGGATCTGAATCATCTGAGAGCTTCCAAAG
GAGGGGAGTGACTACCCAGGACGCACAGGCAGGCTATATAAGTTCCCAAGGGCTGGGCTCCACA
CAGATCTTTGCCTGTGGCTACTGCCTGCTGCCAGAGAGTTACCAAAAGAGAGCTTGCTTGGCAT
CTACCATGTCCGAGGCTGGCACTCCTGAAGCCCCCATCAAGAAGAAGCGCCCCCCTGTGAAGGA
AGAAGACCTGAAGGGGGCCCGGGGGAGTCTGTCCAAGAACCAGGAGATCAAGTCTAAGACGTAC
CAGGTCATGCGGGACTATGAGCAAGCTGGCTCAGCTGCCCCATCTATATTCAGCCGCAACCGCA
CGGGCACCGAGACAGTCTTCGAGAAGCCCAAAGAGGGACCTGCCAAGAGCGTCTTTGGCTGAGA
AGTGCACTTTGCACTACACCCCTGGGCACAGCAACCTGTCCACGAACTCTCTCTCTCTCTCTTT
TTTTTTTTTTAATGCTGGAAGATGCTTTTCCTCTGCCACCTCTGGAACCATCTTGACTGTCACA
ACCCTAGCCCTTGGAAACACCAATAAAGAATACGCCACTTGGGAAGGTACCATGGCCACTACCT
GCAGAAGAGAGGGACAGCATATTGAGTGCCCTTCCTGGTCCCCGAGGTGGGTCGGGGAATGATG
TGTGTGCTTTCAGAACCACTGAGGTGTTCTAGAAAGAGCCTTAGACATGGAGTCCTGATACGGA
CTTTCTGACGGATGTAGACTTGTCTGTTTTCTCTAAATCTCTGTTTTAGGCTGGAAAGACGGTG
CCATAGCTAAGAGTACTTGCTGTTTCTTTAGAGGACGCTGGTTCAATTCCCAAACAGCCGCATG
GCTGCTCATAACCATTTAACTCTGCCACCCTCTTCTGGCCTCTGCGGGCATTGCATACACGTGG
TACGCCTGTGGTCGAAATGTTCACATACCTAAGACAAAAATAAAATGTAAAACTCGAAAAAAAA
AAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_852033	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58571	(Get FASTA)	NCBI Sequence Viewer
	AAP12535	(Get FASTA)	NCBI Sequence Viewer
	EDL88980	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000023330
	ENSRNOP00000023330.4
	ENSRNOP00000091781.1
	ENSRNOP00055029320
	ENSRNOP00060018822
	ENSRNOP00065019748
GenBank Protein	Q80XX4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_852033 ⟸ NM_181368
- UniProtKB:	Q80XX4 (UniProtKB/Swiss-Prot), B0BMU8 (UniProtKB/TrEMBL), A0A8I6AU05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEAGTPEAPIKKKRPPVKEEDLKGARGSLSKNQEIKSKTYQVMRDYEQAGSAAPSIFSRNRTG TETVFEKPKEGPAKSVFG hide sequence

RefSeq Acc Id:

ENSRNOP00000023330 ⟸ ENSRNOT00000023330

RefSeq Acc Id:

ENSRNOP00000091781 ⟸ ENSRNOT00000115791

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q80XX4-F1-model_v2	AlphaFold	Q80XX4	1-82	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699913

Promoter ID:

EPDNEW_R10437

Type:

initiation region

Name:

Mustn1_2

Description:

musculoskeletal, embryonic nuclear protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R10438

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	6,962,638 - 6,962,698	EPDNEW

RGD ID:

13699914

Promoter ID:

EPDNEW_R10438

Type:

single initiation site

Name:

Mustn1_1

Description:

musculoskeletal, embryonic nuclear protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R10437

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	6,962,928 - 6,962,988	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:727804	AgrOrtholog
BioCyc Gene	G2FUF-12177	BioCyc
Ensembl Genes	ENSRNOG00000017369	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00055021137	UniProtKB/Swiss-Prot
	ENSRNOG00060013852	UniProtKB/Swiss-Prot
	ENSRNOG00065015214	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000023330	ENTREZGENE
	ENSRNOT00000023330.7	UniProtKB/Swiss-Prot
	ENSRNOT00000115791.1	UniProtKB/TrEMBL
	ENSRNOT00055036108	UniProtKB/Swiss-Prot
	ENSRNOT00060023670	UniProtKB/Swiss-Prot
	ENSRNOT00065025208	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:9092791	IMAGE-MGC_LOAD
InterPro	MUSTN1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:290553	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:187300	IMAGE-MGC_LOAD
NCBI Gene	290553	ENTREZGENE
Pfam	Mustang	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Mustn1	PhenoGen
RatGTEx	ENSRNOG00000017369	RatGTEx
	ENSRNOG00055021137	RatGTEx
	ENSRNOG00060013852	RatGTEx
	ENSRNOG00065015214	RatGTEx
UniProt	A0A8I6AU05	ENTREZGENE, UniProtKB/TrEMBL
	A6KG23_RAT	UniProtKB/TrEMBL
	B0BMU8	ENTREZGENE, UniProtKB/TrEMBL
	MSTN1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Mustn1	musculoskeletal, embryonic nuclear protein 1	Mustang	fracture callus protein MUSTANG	Symbol and Name updated	1299863	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expression appears to be limited to tissues in the musculoskeletal system in adults, particularly in differentiating periosteal osteogenic cells, proliferating chondrocytes, and osteoblasts of the fracture callus	1302424
gene_expression	expression during embryogenesis is highest in mesenchymal condensations of limbs, vertebral perichondrium, and mesenchymal cells of the intervertebral discs	1302424
gene_homology	comparison with sequences in EST databases showed homologies with mouse, human and cow, but not with any nonmammalian species tested	1302424

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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