Gene: Col18a1 (collagen type XVIII alpha 1 chain) Rattus norvegicus
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Symbol: Col18a1
Name: collagen type XVIII alpha 1 chain
Description: ENCODES a protein that exhibits structural molecule activity (inferred); INVOLVED IN response to drug; response to hydrostatic pressure; angiogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Carcinoma, Hepatocellular; Colitis, Ulcerative; Colonic Neoplasms; FOUND IN extracellular space; basement membrane (ortholog); extracellular exosome (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: collagen alpha-1(XVIII) chain; collagen type XVIII alpha 1; collagen, type XVIII, alpha 1; procollagen, type XVIII, alpha 1
Orthologs:
Homo sapiens (human) : COL18A1 (collagen type XVIII alpha 1 chain)  HGNC
Mus musculus (house mouse) : Col18a1 (collagen, type XVIII, alpha 1)  MGI
Pan paniscus (bonobo/pygmy chimpanzee) : COL18A1 (collagen type XVIII alpha 1 chain)
Canis lupus familiaris (dog) : COL18A1 (collagen type XVIII alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col18a1 (collagen type XVIII alpha 1 chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02012,225,202 - 12,332,858 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.02014,388,743 - 14,495,241 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.42011,920,816 - 11,982,468 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12011,979,239 - 11,981,856 (+)NCBI
Celera2012,974,396 - 13,081,322 (+)NCBI
Cytogenetic Map20p12NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Col18a1
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RGD Object Information
RGD ID: 70936
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2017-03-14
Status: ACTIVE