Gene: Col18a1 (collagen, type XVIII, alpha 1) Rattus norvegicus
Symbol: Col18a1
Name: collagen, type XVIII, alpha 1
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to drug; response to hydrostatic pressure; angiogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Carcinoma, Hepatocellular; Colitis, Ulcerative; Colonic Neoplasms; FOUND IN extracellular space; basement membrane (ortholog); extracellular exosome (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: collagen alpha-1(XVIII) chain; collagen type XVIII alpha 1; procollagen, type XVIII, alpha 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02012,225,202 - 12,332,858 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.02014,388,743 - 14,495,241 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.42011,920,816 - 11,982,468 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12011,979,239 - 11,981,856 (+)NCBI
Celera2012,974,396 - 13,081,322 (+)NCBI
Cytogenetic Map20p12NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Col18a1
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 70936
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2016-05-10
Status: ACTIVE