Rasa3 (RAS p21 protein activator 3) - Rat Genome Database

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Gene: Rasa3 (RAS p21 protein activator 3) Rattus norvegicus
Analyze
Symbol: Rasa3
Name: RAS p21 protein activator 3
RGD ID: 69365
Description: Predicted to enable calcium-release channel activity. Acts upstream of or within cellular response to heat. Predicted to be located in cytoplasmic side of plasma membrane. Orthologous to human RASA3 (RAS p21 protein activator 3); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GAP1(IP4BP); Ins P4-binding protein; R-ras gap; R-Ras GTP activating protein; R-ras GTPase activating protein; ras GTPase-activating protein 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81682,557,556 - 82,671,527 (+)NCBIGRCr8
mRatBN7.21675,855,360 - 75,969,349 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1675,855,265 - 75,970,804 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1681,135,990 - 81,249,957 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01684,588,959 - 84,702,928 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01679,837,128 - 79,951,690 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01681,320,090 - 81,434,239 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1681,318,633 - 81,434,363 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01680,808,492 - 80,922,641 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41680,710,463 - 80,824,220 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11680,815,596 - 80,825,940 (+)NCBI
Celera1673,663,562 - 73,777,478 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2-palmitoylglycerol  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-azacytidine  (ISO)
acetamide  (EXP)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
carbon nanotube  (ISO)
cisplatin  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
dorsomorphin  (ISO)
endosulfan  (EXP)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
Muraglitazar  (EXP)
N-ethyl-N-nitrosourea  (ISO)
nicotine  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pirinixic acid  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
sunitinib  (ISO)
temozolomide  (ISO)
Tesaglitazar  (EXP)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GapIII, a new brain-enriched member of the GTPase-activating protein family. Baba H, etal., J Neurosci Res. 1995 Aug 15;41(6):846-58.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Information Derived from GenBank Report RGD, Sept. 2003
8. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
Additional References at PubMed
PMID:10828023   PMID:18952607  


Genomics

Comparative Map Data
Rasa3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81682,557,556 - 82,671,527 (+)NCBIGRCr8
mRatBN7.21675,855,360 - 75,969,349 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1675,855,265 - 75,970,804 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1681,135,990 - 81,249,957 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01684,588,959 - 84,702,928 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01679,837,128 - 79,951,690 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01681,320,090 - 81,434,239 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1681,318,633 - 81,434,363 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01680,808,492 - 80,922,641 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41680,710,463 - 80,824,220 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11680,815,596 - 80,825,940 (+)NCBI
Celera1673,663,562 - 73,777,478 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
RASA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813113,977,783 - 114,132,623 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13113,977,783 - 114,132,623 (-)EnsemblGRCh38hg38GRCh38
GRCh3713114,747,194 - 114,898,098 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3613113,765,296 - 113,916,197 (-)NCBINCBI36Build 36hg18NCBI36
Build 3413113,765,296 - 113,916,197NCBI
Celera1395,423,074 - 95,573,004 (-)NCBICelera
Cytogenetic Map13q34NCBI
HuRef1395,016,746 - 95,162,033 (-)NCBIHuRef
CHM1_113114,715,940 - 114,865,735 (-)NCBICHM1_1
T2T-CHM13v2.013113,188,423 - 113,340,668 (-)NCBIT2T-CHM13v2.0
Rasa3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39813,617,218 - 13,727,590 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl813,616,948 - 13,727,603 (-)EnsemblGRCm39 Ensembl
GRCm38813,567,218 - 13,677,587 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl813,566,948 - 13,677,603 (-)EnsemblGRCm38mm10GRCm38
MGSCv37813,567,218 - 13,677,587 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36813,567,195 - 13,677,549 (-)NCBIMGSCv36mm8
Celera813,734,036 - 13,844,447 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map86.29NCBI
Rasa3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955404141,060 - 225,572 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955404140,906 - 225,278 (+)NCBIChiLan1.0ChiLan1.0
RASA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214115,451,429 - 115,622,482 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113114,144,769 - 114,304,323 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01395,036,382 - 95,195,480 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113114,123,816 - 114,271,066 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13114,123,816 - 114,271,066 (-)Ensemblpanpan1.1panPan2
RASA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12261,093,762 - 61,202,209 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2261,095,044 - 61,202,152 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2260,805,357 - 60,913,843 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02261,780,849 - 61,889,450 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2261,780,855 - 61,889,451 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12261,218,315 - 61,326,769 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02261,225,625 - 61,334,098 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02261,252,037 - 61,360,858 (-)NCBIUU_Cfam_GSD_1.0
Rasa3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945195,992,373 - 196,074,750 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493703040,116 - 122,490 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493703040,123 - 122,478 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1178,951,019 - 79,027,900 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11178,951,017 - 79,027,991 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21186,685,993 - 86,763,496 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RASA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1391,848,158 - 91,974,675 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl391,848,160 - 91,974,555 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604649,138,040 - 49,271,270 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rasa3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624793257,661 - 334,981 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624793209,616 - 336,304 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rasa3
877 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:83
Interacting mature miRNAs:88
Transcripts:ENSRNOT00000067508
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat

Markers in Region
D16Got83  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21675,855,791 - 75,856,008 (-)MAPPERmRatBN7.2
Rnor_6.01681,433,593 - 81,433,807NCBIRnor6.0
Rnor_5.01680,921,995 - 80,922,209UniSTSRnor5.0
RGSC_v3.41680,710,894 - 80,711,109RGDRGSC3.4
RGSC_v3.41680,710,895 - 80,711,109UniSTSRGSC3.4
RGSC_v3.11680,711,160 - 80,711,374RGD
Celera1673,663,994 - 73,664,208UniSTS
RH 3.4 Map16761.6UniSTS
RH 3.4 Map16761.6RGD
RH 2.0 Map16846.8RGD
Cytogenetic Map16q12.5UniSTS
D16Got98  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21675,860,446 - 75,860,660 (-)MAPPERmRatBN7.2
Rnor_6.01681,428,943 - 81,429,154NCBIRnor6.0
Rnor_5.01680,917,345 - 80,917,556UniSTSRnor5.0
RGSC_v3.41680,715,548 - 80,715,759UniSTSRGSC3.4
Celera1673,668,647 - 73,668,858UniSTS
Cytogenetic Map16q12.5UniSTS
D16Wox25  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21675,853,898 - 75,854,043 (-)MAPPERmRatBN7.2
Rnor_6.01681,435,556 - 81,435,700NCBIRnor6.0
Rnor_5.01680,923,958 - 80,924,102UniSTSRnor5.0
RGSC_v3.41680,709,002 - 80,709,146UniSTSRGSC3.4
Celera1673,662,101 - 73,662,245UniSTS
Cytogenetic Map16q12.5UniSTS
BF386157  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21675,882,147 - 75,882,313 (-)MAPPERmRatBN7.2
Rnor_6.01681,407,290 - 81,407,455NCBIRnor6.0
Rnor_5.01680,895,692 - 80,895,857UniSTSRnor5.0
RGSC_v3.41680,737,247 - 80,737,412UniSTSRGSC3.4
Celera1673,690,346 - 73,690,511UniSTS
RH 3.4 Map16744.6UniSTS
Cytogenetic Map16q12.5UniSTS
RH139547  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21675,970,468 - 75,970,672 (-)MAPPERmRatBN7.2
Rnor_6.01681,318,767 - 81,318,970NCBIRnor6.0
Rnor_5.01680,807,169 - 80,807,372UniSTSRnor5.0
RGSC_v3.41680,825,340 - 80,825,543UniSTSRGSC3.4
Celera1673,778,581 - 73,778,784UniSTS
RH 3.4 Map16743.1UniSTS
Cytogenetic Map16q12.5UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 28 28 20 19 20 2 3 74 33 34 11 2
Low 1 15 29 21 21 6 8 2 7 6
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000067508   ⟹   ENSRNOP00000061587
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1681,349,400 - 81,434,038 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000080963   ⟹   ENSRNOP00000069783
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1675,855,265 - 75,970,804 (+)Ensembl
Rnor_6.0 Ensembl1681,318,633 - 81,434,363 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000092335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1681,330,539 - 81,331,874 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000106408   ⟹   ENSRNOP00000083443
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1675,855,265 - 75,970,804 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000106848   ⟹   ENSRNOP00000086788
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1675,906,166 - 75,970,804 (+)Ensembl
RefSeq Acc Id: NM_031574   ⟹   NP_113762
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81682,557,556 - 82,671,527 (+)NCBI
mRatBN7.21675,855,360 - 75,969,349 (+)NCBI
Rnor_6.01681,320,090 - 81,434,239 (-)NCBI
Rnor_5.01680,808,492 - 80,922,641 (-)NCBI
RGSC_v3.41680,710,463 - 80,824,220 (+)RGD
Celera1673,663,562 - 73,777,478 (+)RGD
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_113762   ⟸   NM_031574
- UniProtKB: Q09YN9 (UniProtKB/Swiss-Prot),   Q9QYJ2 (UniProtKB/Swiss-Prot),   A0A0G2JW85 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000061587   ⟸   ENSRNOT00000067508
RefSeq Acc Id: ENSRNOP00000069783   ⟸   ENSRNOT00000080963
RefSeq Acc Id: ENSRNOP00000086788   ⟸   ENSRNOT00000106848
RefSeq Acc Id: ENSRNOP00000083443   ⟸   ENSRNOT00000106408
Protein Domains
C2   PH   Ras-GAP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QYJ2-F1-model_v2 AlphaFold Q9QYJ2 1-834 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700226
Promoter ID:EPDNEW_R10750
Type:initiation region
Name:Rasa3_1
Description:RAS p21 protein activator 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01681,434,363 - 81,434,423EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:69365 AgrOrtholog
BioCyc Gene G2FUF-10727 BioCyc
Ensembl Genes ENSRNOG00000017671 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000080963 ENTREZGENE
  ENSRNOT00000080963.3 UniProtKB/TrEMBL
  ENSRNOT00000106408.1 UniProtKB/TrEMBL
  ENSRNOT00000106848.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ras_GTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RASA3_PH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RasGAP_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RasGAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_Btk_motif UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:29372 UniProtKB/Swiss-Prot
NCBI Gene 29372 ENTREZGENE
PANTHER PTHR10194 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS GTPASE-ACTIVATING PROTEIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BTK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00168 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RasGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rasa3 PhenoGen
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50004 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_BTK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000017671 RatGTEx
SMART BTK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RasGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00239 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR TC206671
UniProt A0A0G2JW85 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZZA1_RAT UniProtKB/TrEMBL
  A0A8I6ADL3_RAT UniProtKB/TrEMBL
  A6IWG3_RAT UniProtKB/TrEMBL
  Q09YN9 ENTREZGENE
  Q9QYJ2 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q09YN9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Rasa3  RAS p21 protein activator 3      Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in the developing brain 634611