Stmn4 (stathmin 4) - Rat Genome Database

Name: Stmn4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Stmn4 (stathmin 4) Rattus norvegicus

Analyze

Symbol:

Stmn4

Name:

stathmin 4

RGD ID:

69349

Description:

Predicted to enable tubulin binding activity. Predicted to be involved in microtubule depolymerization; neuron projection development; and regulation of microtubule polymerization or depolymerization. Predicted to be located in Golgi apparatus and growth cone. Predicted to be active in cytoplasm and neuron projection. Orthologous to human STMN4 (stathmin 4); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Lagl; Lagl-pending; leukemia-associated gene-like; MGC109417; Rb3; stathmin-4; stathmin-like 4; stathmin-like protein B3; stathmin-like-protein RB3

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	STMN4 (stathmin 4)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Stmn4 (stathmin-like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Stmn4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	STMN4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	STMN4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Stmn4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	STMN4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	STMN4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Stmn4 (stathmin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	STMN4 (stathmin 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Stmn4 (stathmin-like 4)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	stmn4 (stathmin-like 4)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	stmn4l (stathmin-like 4, like)	Alliance	DIOPT (OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	stai	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	stmn4	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	44,716,825 - 44,734,776 (+)	NCBI		GRCr8
mRatBN7.2	15	40,541,305 - 40,559,253 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	40,541,357 - 40,559,253 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	42,409,086 - 42,426,670 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	43,559,288 - 43,576,887 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	42,001,642 - 42,019,538 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	43,007,901 - 43,025,852 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	43,007,908 - 43,025,852 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	45,779,352 - 45,797,949 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	45,795,145 - 45,813,729 (+)	NCBI
Celera	15	40,214,566 - 40,232,681 (+)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane (EXP)

1,2-dimethylhydrazine (ISO)

15-acetyldeoxynivalenol (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,4-methylenedioxymethamphetamine (ISO)

3H-1,2-dithiole-3-thione (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

5-aza-2'-deoxycytidine (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitriptyline (EXP)

amphotericin B (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

butanal (ISO)

Butylbenzyl phthalate (EXP)

cadmium dichloride (ISO)

cisplatin (ISO)

cytarabine (ISO)

dibutyl phthalate (EXP)

diethyl phthalate (EXP)

diisobutyl phthalate (EXP)

diisononyl phthalate (EXP)

entinostat (ISO)

ethanol (ISO)

folic acid (ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

Muraglitazar (EXP)

N-Nitrosopyrrolidine (ISO)

niclosamide (ISO)

nitrofen (EXP)

paracetamol (ISO)

paraquat (EXP)

progesterone (ISO)

sodium arsenite (ISO)

Tesaglitazar (EXP)

troglitazone (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

microtubule depolymerization (IBA,IEA)

neuron projection development (IBA,IEA)

regulation of microtubule polymerization or depolymerization (IBA,IEA)

Cellular Component

cytoplasm (IBA,IEA)

Golgi apparatus (IEA)

growth cone (IEA)

neuron projection (IBA,IEA)

Molecular Function

protein binding (ISO)

tubulin binding (IBA,IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	The stathmin phosphoprotein family: intracellular localization and effects on the microtubule network.	Gavet O, etal., J Cell Sci 1998 Nov;111 ( Pt 22):3333-46.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	The stathmin family -- molecular and biological characterization of novel mammalian proteins expressed in the nervous system.	Ozon S, etal., Eur J Biochem 1997 Sep 15;248(3):794-806.
6.	SCLIP: a novel SCG10-like protein of the stathmin family expressed in the nervous system.	Ozon S, etal., J Neurochem 1998 Jun;70(6):2386-96.
7.	Differential, regional, and cellular expression of the stathmin family transcripts in the adult rat brain.	Ozon S, etal., J Neurosci Res 1999 Jun 1;56(5):553-64.
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data

Additional References at PubMed

PMID:12477932	PMID:15039434	PMID:16256088

Genomics

Comparative Map Data

Stmn4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	44,716,825 - 44,734,776 (+)	NCBI		GRCr8
mRatBN7.2	15	40,541,305 - 40,559,253 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	40,541,357 - 40,559,253 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	42,409,086 - 42,426,670 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	43,559,288 - 43,576,887 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	42,001,642 - 42,019,538 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	43,007,901 - 43,025,852 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	43,007,908 - 43,025,852 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	45,779,352 - 45,797,949 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	45,795,145 - 45,813,729 (+)	NCBI
Celera	15	40,214,566 - 40,232,681 (+)	NCBI		Celera
Cytogenetic Map	15	p12	NCBI

STMN4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	27,235,308 - 27,258,404 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	27,235,308 - 27,258,420 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	27,092,825 - 27,115,921 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	27,149,731 - 27,171,820 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	27,149,732 - 27,171,820	NCBI
Celera	8	26,056,724 - 26,078,813 (-)	NCBI		Celera
Cytogenetic Map	8	p21.2	NCBI
HuRef	8	25,638,934 - 25,661,015 (-)	NCBI		HuRef
CHM1_1	8	27,295,753 - 27,317,841 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	27,512,166 - 27,535,258 (-)	NCBI		T2T-CHM13v2.0

Stmn4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	66,581,806 - 66,599,129 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	66,581,745 - 66,599,129 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	66,344,210 - 66,361,680 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	66,344,296 - 66,361,680 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	66,963,212 - 66,980,517 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	65,298,485 - 65,315,790 (+)	NCBI		MGSCv36	mm8
Celera	14	64,096,120 - 64,113,411 (+)	NCBI		Celera
Cytogenetic Map	14	D1	NCBI
cM Map	14	34.48	NCBI

Stmn4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	49,768,592 - 49,789,938 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	49,768,592 - 49,789,429 (-)	NCBI	ChiLan1.0	ChiLan1.0

STMN4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	45,766,254 - 45,788,246 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	21,480,461 - 21,502,450 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	26,504,801 - 26,527,773 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	23,707,692 - 23,730,635 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	23,707,692 - 23,730,629 (-)	Ensembl	panpan1.1		panPan2

STMN4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	30,330,771 - 30,352,117 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	30,330,823 - 30,351,666 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	30,919,163 - 30,940,502 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	30,523,239 - 30,544,587 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	30,523,341 - 30,545,204 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	30,453,019 - 30,474,354 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	30,334,281 - 30,355,632 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	30,500,905 - 30,522,251 (+)	NCBI		UU_Cfam_GSD_1.0

Stmn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	8,432,567 - 8,450,953 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936675	135,198 - 153,601 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936675	135,200 - 153,541 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STMN4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	10,987,337 - 11,007,628 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	10,986,510 - 11,007,757 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	12,166,295 - 12,186,613 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STMN4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	25,344,364 - 25,365,985 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	25,344,323 - 25,370,276 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	16,782,016 - 16,804,443 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stmn4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	21,982,693 - 22,003,888 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	21,983,611 - 22,003,790 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Stmn4
97 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	178
Count of miRNA genes:	94
Interacting mature miRNAs:	97
Transcripts:	ENSRNOT00000012366, ENSRNOT00000058952, ENSRNOT00000058953
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731170	Pur3	Proteinuria QTL 3	2.3	0.0005	urine protein amount (VT:0005160)	urine protein excretion rate (CMO:0000759)	15	1	41686771	Rat
1641887	Alcrsp14	Alcohol response QTL 14			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	15	1	42356671	Rat
2298549	Neuinf12	Neuroinflammation QTL 12	3.5		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	15	1	55302115	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	306329	45306329	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2266368	46921453	Rat
1582251	Gluco24	Glucose level QTL 24	3.2	0.0008	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	15	5530756	50530756	Rat
631273	Lecl2	Lens clarity QTL 2		0.001	lens clarity trait (VT:0001304)	age of onset/diagnosis of cataract (CMO:0001584)	15	10596089	55596089	Rat
2300167	Bmd63	Bone mineral density QTL 63	5.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	15	11111142	56111142	Rat
2300173	Bmd62	Bone mineral density QTL 62	12.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	15	11111142	56111142	Rat
2293688	Bss29	Bone structure and strength QTL 29	5.31	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	15	11111142	56111142	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	12496141	65205939	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	15	16725528	80672115	Rat
1331729	Rf42	Renal function QTL 42	3.071		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	15	17362897	73690657	Rat
2324620	Coatc3	Coat color QTL 3			coat/hair pigmentation trait (VT:0010463)	pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)	15	19856566	46187442	Rat
10054130	Srcrt8	Stress Responsive Cort QTL 8	2.18	0.0085	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	15	22117933	67117933	Rat
1578646	Bmd18	Bone mineral density QTL 18	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	15	22806240	98288169	Rat
1578647	Bmd17	Bone mineral density QTL 17	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	15	22806240	98288169	Rat
1578660	Bss19	Bone structure and strength QTL 19	4.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	15	22806240	98288169	Rat
1582214	Stl21	Serum triglyceride level QTL 21	3.1	0.022	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	15	28030665	82262678	Rat
1582227	Gluco30	Glucose level QTL 30	3.6	0.0003	blood glucose amount (VT:0000188)	absolute change in blood glucose level area under curve (CMO:0002034)	15	28030665	82262678	Rat
1582228	Epfw3	Epididymal fat weight QTL 3	4.1	0.0002	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	15	28030665	82262678	Rat
1582242	Gluco28	Glucose level QTL 28	3.3	0.0008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	15	28030665	82262678	Rat
1582244	Bw79	Body weight QTL 79	4	0.0002	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	15	28030665	82262678	Rat
2293691	Bmd37	Bone mineral density QTL 37	6.6	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	15	33611058	71477291	Rat
2293686	Bmd36	Bone mineral density QTL 36	7.4	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	15	33611058	71477291	Rat
1598828	Glom14	Glomerulus QTL 14	2.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	15	34054139	79054139	Rat
7411725	Strs7	Sensitivity to stroke QTL 7	3.8		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	15	40289901	49308583	Rat

Markers in Region

MDB0514

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	40,559,032 - 40,559,174 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	43,025,632 - 43,025,773	NCBI	Rnor6.0
Rnor_5.0	15	48,564,854 - 48,564,995	UniSTS	Rnor5.0
RGSC_v3.4	15	45,797,755 - 45,797,896	UniSTS	RGSC3.4
Celera	15	40,232,461 - 40,232,602	UniSTS
Cytogenetic Map	15	p12	UniSTS

RH125214

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	40,559,064 - 40,559,223 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	43,025,664 - 43,025,822	NCBI	Rnor6.0
Rnor_5.0	15	48,564,805 - 48,564,963	UniSTS	Rnor5.0
RGSC_v3.4	15	45,797,787 - 45,797,945	UniSTS	RGSC3.4
Celera	15	40,232,493 - 40,232,651	UniSTS
Cytogenetic Map	15	p12	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									72		1
Low	3	38	9	4		4	5	8	2	4	37	10	5
Below cutoff		5	32	22	14	22	3	3		19	3	1	3

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001270855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001270856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001270857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001270858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001270859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_019176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008770778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC112574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC142477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF026528	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF026529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF026530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC092646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB580507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000084753 ⟹ ENSRNOP00000072524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	40,541,357 - 40,559,253 (+)	Ensembl
Rnor_6.0 Ensembl	15	43,007,908 - 43,025,852 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000087709 ⟹ ENSRNOP00000069450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	40,541,357 - 40,559,253 (+)	Ensembl
Rnor_6.0 Ensembl	15	43,007,908 - 43,025,852 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000091567 ⟹ ENSRNOP00000073294

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	40,541,357 - 40,559,253 (+)	Ensembl
Rnor_6.0 Ensembl	15	43,007,908 - 43,025,852 (+)	Ensembl

RefSeq Acc Id:

NM_001270855 ⟹ NP_001257784

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,880 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,357 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,908 - 43,025,852 (+)	NCBI
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI
Celera	15	40,214,566 - 40,232,681 (+)	NCBI

Sequence:

show sequence

TGGCGAGAGCCCAGCAGTGGTGCTGATGTTGAGAGAAGCTCAGGGTACCACTAATTGAAGGAGT
GAGAAGAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAGCTGGTGA
TAAACACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACCCTCGCAG
CCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTCTGTCTGA
TCCCCTGAATAAATCATCCTACAAATATGAAGGCTGGTGTGGGAGACAGTGTAGGAGGAAAGGT
CAAAGCCAGCGGAAAGGCAGTGCTGACTGGAGAGAAAGAAGAGAACAGGCAGATACGGTAGACC
TGAACTGGTGTGTCATCTCTGATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCCAGTC
CTTTGAAGTCATCCTGAAGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCA
AGACGTCGAGACCCATCGCTAGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGA
AGTACCAGGAAGCTGAGCTCCTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGGTAAT
CCAGAAAGCTATCGAGGAAAACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCAGAAG
ATGGAGTCCAATAAGGAAAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGA
AGGAGCCGCCTGCTGCGCGGTGACTCCCGGGACCGATCGGTGGCCTCGTCCCATGGACAAGCAC
GCAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCA
AGGAAGTTTCCAGGACAGCCGGACAGCTCCCGCAGCAACCTGGTTCCAGCAGCATCGGCCGCTG
GCTGCTCTCCCAGCACTGGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGGCGTTTCCTCTGCTTT
TGGTGTTTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGTTTCTGGGGAACAATGA
TGGGGTGGGAGAGGGGACAGAGAGTGTGTGGAAAAGGAGGTGAAGATGAGCCCGAGGACTTTGT
GACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCACGGCTCTGCCTGGACAT
TCGGCCTCCAGGTTCCTAGTGGAGAGAAGATGTGACAGAAGTTCAGAGTGAAGGGCCGAGTCCT
GGTGGGGTGGTGTGCAGGGCCAGCAGGACGAGCCCGTCTGGATGGAGTGAAACCTACCCTGAGC
GGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATGACCAACGAAAC
ATTTAA

hide sequence

RefSeq Acc Id:

NM_001270856 ⟹ NP_001257785

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,880 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,357 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,908 - 43,025,852 (+)	NCBI
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI
Celera	15	40,214,566 - 40,232,681 (+)	NCBI

Sequence:

show sequence

TGGCGAGAGCCCAGCAGTGGTGCTGATGTTGAGAGAAGCTCAGGGTACCACTAATTGAAGGAGT
GAGAAGAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAGCTGGTGA
TAAACACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACCCTCGCAG
CCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTCTGTCTGA
TCCCCTGAATAAATCATCCTACAAATATGAAGCAGATACGGTAGACCTGAACTGGTGTGTCATC
TCTGATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCCAGTCCTTTGAAGTCATCCTGA
AGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCAAGACGTCGAGACCCATC
GCTAGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGAAGTACCAGGAAGCTGAG
CTCCTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGGTAATCCAGAAAGCTATCGAGG
AAAACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGA
AAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCACGCAGAG
GAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAG
TTTCCAGGACAGCCGGACAGCTCCCGCAGCAACCTGGTTCCAGCAGCATCGGCCGCTGGCTGCT
CTCCCAGCACTGGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGGCGTTTCCTCTGCTTTTGGTGT
TTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGTTTCTGGGGAACAATGATGGGGT
GGGAGAGGGGACAGAGAGTGTGTGGAAAAGGAGGTGAAGATGAGCCCGAGGACTTTGTGACACT
GTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCACGGCTCTGCCTGGACATTCGGCC
TCCAGGTTCCTAGTGGAGAGAAGATGTGACAGAAGTTCAGAGTGAAGGGCCGAGTCCTGGTGGG
GTGGTGTGCAGGGCCAGCAGGACGAGCCCGTCTGGATGGAGTGAAACCTACCCTGAGCGGGTGG
GATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATGACCAACGAAACATTTAA

hide sequence

RefSeq Acc Id:

NM_001270857 ⟹ NP_001257786

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,880 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,357 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,908 - 43,025,852 (+)	NCBI
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI
Celera	15	40,214,566 - 40,232,681 (+)	NCBI

Sequence:

show sequence

TGGCGAGAGCCCAGCAGTGGTGCTGATGTTGAGAGAAGCTCAGGGTACCACTAATTGAAGGAGT
GAGAAGAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAGCTGGTGA
TAAACACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACCCTCGCAG
CCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTCTGTCTGA
TCCCCTGAATAAATCATCCTACAAATATGAAGATACGGTAGACCTGAACTGGTGTGTCATCTCT
GATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCCAGTCCTTTGAAGTCATCCTGAAGC
CACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCAAGACGTCGAGACCCATCGCT
AGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGAAGTACCAGGAAGCTGAGCTC
CTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGGTAATCCAGAAAGCTATCGAGGAAA
ACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAAAA
CCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCACGCAGAGGAG
GTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTTT
CCAGGACAGCCGGACAGCTCCCGCAGCAACCTGGTTCCAGCAGCATCGGCCGCTGGCTGCTCTC
CCAGCACTGGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGGCGTTTCCTCTGCTTTTGGTGTTTG
TACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGTTTCTGGGGAACAATGATGGGGTGGG
AGAGGGGACAGAGAGTGTGTGGAAAAGGAGGTGAAGATGAGCCCGAGGACTTTGTGACACTGTC
CACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCACGGCTCTGCCTGGACATTCGGCCTCC
AGGTTCCTAGTGGAGAGAAGATGTGACAGAAGTTCAGAGTGAAGGGCCGAGTCCTGGTGGGGTG
GTGTGCAGGGCCAGCAGGACGAGCCCGTCTGGATGGAGTGAAACCTACCCTGAGCGGGTGGGAT
AAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATGACCAACGAAACATTTAA

hide sequence

RefSeq Acc Id:

NM_001270858 ⟹ NP_001257787

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,880 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,357 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,908 - 43,025,852 (+)	NCBI
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI
Celera	15	40,214,566 - 40,232,681 (+)	NCBI

Sequence:

show sequence

TGGCGAGAGCCCAGCAGTGGTGCTGATGTTGAGAGAAGCTCAGGGTACCACTAATTGAAGGAGT
GAGAAGAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAGCTGGTGA
TAAACACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACCCTCGCAG
CCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTCTGTCTGA
TCCCCTGAATAAATCATCCTACAAATATGAAGCAGATACGGTAGACCTGAACTGGTGTGTCATC
TCTGATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCCAGTCCTTTGAAGTCATCCTGA
AGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCAAGACGTCGAGACCCATC
GCTAGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGAAGTACCAGGAAGCTGAG
CTCCTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGGTAATCCAGAAAGCTATCGAGG
AAAACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGA
AAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCCTGCTGCG
CGGTGACTCCCGGGACCGATCGGTGGCCTCGTCCCATGGACAAGCACGCAGAGGAGGTGCGGAA
AAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGACA
GCCGGACAGCTCCCGCAGCAACCTGGTTCCAGCAGCATCGGCCGCTGGCTGCTCTCCCAGCACT
GGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGGCGTTTCCTCTGCTTTTGGTGTTTGTACATGTA
AAAGATTGACCAGTGAAGCCATCCTATTTGTTTCTGGGGAACAATGATGGGGTGGGAGAGGGGA
CAGAGAGTGTGTGGAAAAGGAGGTGAAGATGAGCCCGAGGACTTTGTGACACTGTCCACTGACT
GCAGACTTGGGCCAAGGCCCCCGCTTTTCACGGCTCTGCCTGGACATTCGGCCTCCAGGTTCCT
AGTGGAGAGAAGATGTGACAGAAGTTCAGAGTGAAGGGCCGAGTCCTGGTGGGGTGGTGTGCAG
GGCCAGCAGGACGAGCCCGTCTGGATGGAGTGAAACCTACCCTGAGCGGGTGGGATAAGGTCTG
TGTGCGTCTGTTCATTGTCATCTTTTGATCATCATGACCAACGAAACATTTAA

hide sequence

RefSeq Acc Id:

NM_001270859 ⟹ NP_001257788

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,949 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,426 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,977 - 43,025,852 (+)	NCBI
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI
Celera	15	40,214,635 - 40,232,681 (+)	NCBI

Sequence:

show sequence

GAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAGCTGGTGATAAAC
ACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACCCTCGCAGCCTAT
AAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTCTGTCTGATCCCC
TGAATAAATCATCCTACAAATATGAAGGCTGGTGTGGGAGACAGTGTAGGAGGAAAGGTCAAAG
CCAGCGGAAAGGCAGTGCTGACTGGAGAGAAAGAAGAGAACAGGCAGATACGGTAGACCTGAAC
TGGTGTGTCATCTCTGATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCCAGTCCTTTG
AAGTCATCCTGAAGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCAAGACG
TCGAGACCCATCGCTAGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGAAGTAC
CAGGAAGCTGAGCTCCTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGGTAATCCAGA
AAGCTATCGAGGAAAACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCAGAAGATGGA
GTCCAATAAGGAAAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGAG
CCGCCTGCTGCGCGGTGACTCCCGGGACCGATCGGTGGCCTCGTCCCATGGACAAGCACGCAGA
GGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAA
GTTTCCAGGACAGCCGGACAGCTCCCGCAGCAACCTGGTTCCAGCAGCATCGGCCGCTGGCTGC
TCTCCCAGCACTGGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGGCGTTTCCTCTGCTTTTGGTG
TTTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGTTTCTGGGGAACAATGATGGGG
TGGGAGAGGGGACAGAGAGTGTGTGGAAAAGGAGGTGAAGATGAGCCCGAGGACTTTGTGACAC
TGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCACGGCTCTGCCTGGACATTCGGC
CTCCAGGTTCCTAGTGGAGAGAAGATGTGACAGAAGTTCAGAGTGAAGGGCCGAGTCCTGGTGG
GGTGGTGTGCAGGGCCAGCAGGACGAGCCCGTCTGGATGGAGTGAAACCTACCCTGAGCGGGTG
GGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATGACCAACGAAACATTTA
A

hide sequence

RefSeq Acc Id:

NM_019176 ⟹ NP_062049

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,880 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,357 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,908 - 43,025,852 (+)	NCBI
Rnor_5.0	15	48,564,775 - 48,585,844 (-)	NCBI
RGSC_v3.4	15	45,779,352 - 45,797,949 (+)	RGD
Celera	15	40,214,566 - 40,232,681 (+)	NCBI

Sequence:

show sequence

TGGCGAGAGCCCAGCAGTGGTGCTGATGTTGAGAGAAGCTCAGGGTACCACTAATTGAAGGAGT
GAGAAGAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAGCTGGTGA
TAAACACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACCCTCGCAG
CCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTCTGTCTGA
TCCCCTGAATAAATCATCCTACAAATATGAAGGCTGGTGTGGGAGACAGTGTAGGAGGAAAGGT
CAAAGCCAGCGGAAAGGCAGTGCTGACTGGAGAGAAAGAAGAGAACAGGCAGATACGGTAGACC
TGAACTGGTGTGTCATCTCTGATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCCAGTC
CTTTGAAGTCATCCTGAAGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCA
AGACGTCGAGACCCATCGCTAGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGA
AGTACCAGGAAGCTGAGCTCCTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGGTAAT
CCAGAAAGCTATCGAGGAAAACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCAGAAG
ATGGAGTCCAATAAGGAAAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGA
AGGACAAGCACGCAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAG
CCCAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGCAGCAACCTGGTTCCAGCAGC
ATCGGCCGCTGGCTGCTCTCCCAGCACTGGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGGCGTT
TCCTCTGCTTTTGGTGTTTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGTTTCTG
GGGAACAATGATGGGGTGGGAGAGGGGACAGAGAGTGTGTGGAAAAGGAGGTGAAGATGAGCCC
GAGGACTTTGTGACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCACGGCTC
TGCCTGGACATTCGGCCTCCAGGTTCCTAGTGGAGAGAAGATGTGACAGAAGTTCAGAGTGAAG
GGCCGAGTCCTGGTGGGGTGGTGTGCAGGGCCAGCAGGACGAGCCCGTCTGGATGGAGTGAAAC
CTACCCTGAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATG
ACCAACGAAACATTTAA

hide sequence

RefSeq Acc Id:

XM_008770778 ⟹ XP_008769000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,825 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,305 - 40,559,253 (+)	NCBI
Rnor_6.0	15	43,007,901 - 43,025,852 (+)	NCBI

Sequence:

show sequence

GATGTCATGGCGAGAGCCCAGCAGTGGTGCTGATGTTGAGAGAAGCTCAGGGTACCACTAATTG
AAGGAGTGAGAAGAGAACAGCTCGCTTTGGAAACCGGACTGCAGGATTGTGATCCAGTTCTGAG
CTGGTGATAAACACTCCTTGTGACTTTTGGTCAATTCAGCTACCAGATTCCAGCCAACATGACC
CTCGCAGCCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCCTGTTTTC
TGTCTGATCCCCTGAATAAATCATCCTACAAATATGAAGGCTGGTGTGGGAGACAGTGTAGGAG
GAAAGGTCAAAGCCAGCGGAAAGGCAGTGCTGACTGGAGAGAAAGAAGAGAACAGGATACGGTA
GACCTGAACTGGTGTGTCATCTCTGATATGGAAGTCATCGAGCTGAATAAGTGTACCTCGGGCC
AGTCCTTTGAAGTCATCCTGAAGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCT
CCCAAGACGTCGAGACCCATCGCTAGAAGAGATACAGAAGAAGCTAGAAGCAGCAGAGGAGCGA
AGGAAGTACCAGGAAGCTGAGCTCCTAAAACACCTTGCAGAGAAACGAGAGCATGAGCGTGAGG
TAATCCAGAAAGCTATCGAGGAAAACAACAACTTCATCAAGATGGCGAAAGAGAAGCTGGCCCA
GAAGATGGAGTCCAATAAGGAAAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAA
GAGAAGGACAAGCACGCAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGT
AAAGCCCAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGCAGCAACCTGGTTCCAG
CAGCATCGGCCGCTGGCTGCTCTCCCAGCACTGGGGTTCGGGGGGAGGGGGGTGGCCAAAGGGG
CGTTTCCTCTGCTTTTGGTGTTTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGTT
TCTGGGGAACAATGATGGGGTGGGAGAGGGGACAGAGAGTGTGTGGAAAAGGAGGTGAAGATGA
GCCCGAGGACTTTGTGACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCACG
GCTCTGCCTGGACATTCGGCCTCCAGGTTCCTAGTGGAGAGAAGATGTGACAGAAGTTCAGAGT
GAAGGGCCGAGTCCTGGTGGGGTGGTGTGCAGGGCCAGCAGGACGAGCCCGTCTGGATGGAGTG
AAACCTACCCTGAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCAT
CATGACCAACGAAACATTTA

hide sequence

RefSeq Acc Id:

XM_039093677 ⟹ XP_038949605

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,862 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,350 - 40,559,253 (+)	NCBI

RefSeq Acc Id:

XM_039093679 ⟹ XP_038949607

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,899 - 44,734,776 (+)	NCBI
mRatBN7.2	15	40,541,376 - 40,559,253 (+)	NCBI

RefSeq Acc Id:

XM_063274678 ⟹ XP_063130748

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,862 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274679 ⟹ XP_063130749

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,926 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274680 ⟹ XP_063130750

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,931 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274681 ⟹ XP_063130751

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,862 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274682 ⟹ XP_063130752

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,865 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274683 ⟹ XP_063130753

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,865 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274684 ⟹ XP_063130754

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,915 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274685 ⟹ XP_063130755

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,931 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274686 ⟹ XP_063130756

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,863 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274687 ⟹ XP_063130757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,863 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274688 ⟹ XP_063130758

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,931 - 44,734,776 (+)	NCBI

RefSeq Acc Id:

XM_063274689 ⟹ XP_063130759

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	44,716,825 - 44,734,282 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001257784	(Get FASTA)	NCBI Sequence Viewer
	NP_001257785	(Get FASTA)	NCBI Sequence Viewer
	NP_001257786	(Get FASTA)	NCBI Sequence Viewer
	NP_001257787	(Get FASTA)	NCBI Sequence Viewer
	NP_001257788	(Get FASTA)	NCBI Sequence Viewer
	NP_062049	(Get FASTA)	NCBI Sequence Viewer
	XP_008769000	(Get FASTA)	NCBI Sequence Viewer
	XP_038949605	(Get FASTA)	NCBI Sequence Viewer
	XP_038949607	(Get FASTA)	NCBI Sequence Viewer
	XP_063130748	(Get FASTA)	NCBI Sequence Viewer
	XP_063130749	(Get FASTA)	NCBI Sequence Viewer
	XP_063130750	(Get FASTA)	NCBI Sequence Viewer
	XP_063130751	(Get FASTA)	NCBI Sequence Viewer
	XP_063130752	(Get FASTA)	NCBI Sequence Viewer
	XP_063130753	(Get FASTA)	NCBI Sequence Viewer
	XP_063130754	(Get FASTA)	NCBI Sequence Viewer
	XP_063130755	(Get FASTA)	NCBI Sequence Viewer
	XP_063130756	(Get FASTA)	NCBI Sequence Viewer
	XP_063130757	(Get FASTA)	NCBI Sequence Viewer
	XP_063130758	(Get FASTA)	NCBI Sequence Viewer
	XP_063130759	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC95061	(Get FASTA)	NCBI Sequence Viewer
	AAC95062	(Get FASTA)	NCBI Sequence Viewer
	AAC95063	(Get FASTA)	NCBI Sequence Viewer
	AAH92646	(Get FASTA)	NCBI Sequence Viewer
	EDL85386	(Get FASTA)	NCBI Sequence Viewer
	EDL85387	(Get FASTA)	NCBI Sequence Viewer
	EDL85388	(Get FASTA)	NCBI Sequence Viewer
	EDL85389	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000069450
	ENSRNOP00000069450.1
	ENSRNOP00000072524
	ENSRNOP00000072524.1
	ENSRNOP00000073294
	ENSRNOP00000073294.1
GenBank Protein	P63043	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_062049 ⟸ NM_019176
- Peptide Label:	isoform a
- UniProtKB:	A6K6M6 (UniProtKB/TrEMBL), A6K6M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEGWCGRQCRRKGQSQRKGSADWRERREQA DTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAA EERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLE RLQEKDKHAEEVRKNKELKEEASR hide sequence

RefSeq Acc Id:	NP_001257784 ⟸ NM_001270855
- Peptide Label:	isoform b
- UniProtKB:	Q568Y8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEGWCGRQCRRKGQSQRKGSADWRERREQA DTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAA EERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLE RLQEKEPPAAR hide sequence

RefSeq Acc Id:	NP_001257787 ⟸ NM_001270858
- Peptide Label:	isoform e
- UniProtKB:	P63043 (UniProtKB/Swiss-Prot), Q568Y8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEADTVDLNWCVISDMEVIELNKCTSGQSF EVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQ KAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKEPPAAR hide sequence

RefSeq Acc Id:	NP_001257785 ⟸ NM_001270856
- Peptide Label:	isoform c
- UniProtKB:	P63043 (UniProtKB/Swiss-Prot), A6K6M9 (UniProtKB/TrEMBL), A6K6M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEADTVDLNWCVISDMEVIELNKCTSGQSF EVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQ KAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKEEASR hide sequence

RefSeq Acc Id:	NP_001257786 ⟸ NM_001270857
- Peptide Label:	isoform d
- UniProtKB:	A6K6M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEDTVDLNWCVISDMEVIELNKCTSGQSFE VILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQK AIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKEEASR hide sequence

RefSeq Acc Id:	NP_001257788 ⟸ NM_001270859
- Peptide Label:	isoform b
- UniProtKB:	Q568Y8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEGWCGRQCRRKGQSQRKGSADWRERREQA DTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAA EERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLE RLQEKEPPAAR hide sequence

RefSeq Acc Id:	XP_008769000 ⟸ XM_008770778
- Peptide Label:	isoform X2
- UniProtKB:	A6K6M7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEGWCGRQCRRKGQSQRKGSADWRERREQD TVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAE ERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLER LQEKDKHAEEVRKNKELKEEASR hide sequence

RefSeq Acc Id:

ENSRNOP00000072524 ⟸ ENSRNOT00000084753

RefSeq Acc Id:

ENSRNOP00000069450 ⟸ ENSRNOT00000087709

RefSeq Acc Id:

ENSRNOP00000073294 ⟸ ENSRNOT00000091567

RefSeq Acc Id:	XP_038949605 ⟸ XM_039093677
- Peptide Label:	isoform X1
- UniProtKB:	A6K6M6 (UniProtKB/TrEMBL), A6K6M7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949607 ⟸ XM_039093679
- Peptide Label:	isoform X4
- UniProtKB:	A6K6M7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130759 ⟸ XM_063274689
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063130748 ⟸ XM_063274678
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063130751 ⟸ XM_063274681
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063130757 ⟸ XM_063274687
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063130756 ⟸ XM_063274686
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063130753 ⟸ XM_063274683
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063130752 ⟸ XM_063274682
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063130754 ⟸ XM_063274684
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063130749 ⟸ XM_063274679
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063130750 ⟸ XM_063274680
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063130755 ⟸ XM_063274685
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063130758 ⟸ XM_063274688
- Peptide Label:	isoform X4

Protein Domains

SLD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P63043-F1-model_v2	AlphaFold	P63043	1-189	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699757

Promoter ID:

EPDNEW_R10281

Type:

multiple initiation site

Name:

Stmn4_1

Description:

stathmin 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	43,007,954 - 43,008,014	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:69349	AgrOrtholog
BioCyc Gene	G2FUF-13324	BioCyc
Ensembl Genes	ENSRNOG00000053334	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000084753	ENTREZGENE
	ENSRNOT00000084753.2	UniProtKB/TrEMBL
	ENSRNOT00000087709	ENTREZGENE
	ENSRNOT00000087709.2	UniProtKB/Swiss-Prot
	ENSRNOT00000091567	ENTREZGENE
	ENSRNOT00000091567.2	UniProtKB/Swiss-Prot
Gene3D-CATH	6.10.280.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7319130	IMAGE-MGC_LOAD
InterPro	Stathmin_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Stathmin_fam	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Stathmin_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:79423	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:109417	IMAGE-MGC_LOAD
NCBI Gene	79423	ENTREZGENE
PANTHER	PTHR10104	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR10104:SF6	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Stathmin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Stmn4	PhenoGen
PIRSF	Stathmin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	STATHMIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	STATHMIN_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	STATHMIN_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	STATHMIN_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000053334	RatGTEx
Superfamily-SCOP	SSF101494	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR	TC216603
UniProt	A6K6M6	ENTREZGENE, UniProtKB/TrEMBL
	A6K6M7	ENTREZGENE, UniProtKB/TrEMBL
	A6K6M9	ENTREZGENE, UniProtKB/TrEMBL
	P63043	ENTREZGENE
	Q568Y8	ENTREZGENE, UniProtKB/TrEMBL
	STMN4_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	O35414	UniProtKB/Swiss-Prot
	O35415	UniProtKB/Swiss-Prot
	O35416	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Stmn4	stathmin 4	Stmn4	stathmin-like 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2002-06-10	Stmn4	stathmin-like 4			Symbol and Name status set to approved	70586	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_process	responsible for differentiated neuronal functions	68864
gene_product	member of the stathmin family of phosphoprotein	68864
gene_transcript	has two cysteine residues that are responsible for membrane attachment through palmitoylation	68864

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar