Gene: Nr1i2 (nuclear receptor subfamily 1, group I, member 2) Rattus norvegicus
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Symbol: Nr1i2
Name: nuclear receptor subfamily 1, group I, member 2
Description: ENCODES a protein that exhibits nuclear receptor activity; drug binding (ortholog); RNA polymerase II regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN drug export (ortholog); exogenous drug catabolic process (ortholog); negative regulation of transcription, DNA-templated (ortholog); ASSOCIATED WITH Adenocarcinoma (ortholog); adenocarcinoma (ortholog); Barrett Esophagus (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nuclear body (ortholog); nucleoplasm (ortholog); INTERACTS WITH (+)-trans-(S)-allethrin; 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1-naphthol
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC108643; nuclear receptor subfamily 1 group I member 2; nuclear receptor subfamily 1, group 1, member 2; orphan nuclear receptor PXR; pregnane X receptor (nuclear receptor sub family 1, group I, member 2); PXR
Orthologs:
Homo sapiens (human) : NR1I2 (nuclear receptor subfamily 1 group I member 2)  HGNC  AGR
Mus musculus (house mouse) : Nr1i2 (nuclear receptor subfamily 1, group I, member 2)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Nr1i2 (nuclear receptor subfamily 1 group I member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : NR1I2 (nuclear receptor subfamily 1 group I member 2)
Canis lupus familiaris (dog) : NR1I2 (nuclear receptor subfamily 1 group I member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nr1i2 (nuclear receptor subfamily 1 group I member 2)
more info ...
Allele / Splice: Nr1i2 em1Sage  
Genetic Models: SD-Nr1i2 em1Sage SD-Nr1i2 em1SageNr1i3 em1Sage SD-Nr1i2 em1SageNr1i3 em1SageAhrem1Sage
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01165,022,100 - 65,058,546 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01167,024,185 - 67,060,494 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41164,239,918 - 64,276,702 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11164,297,534 - 64,333,716 (+)NCBI
Celera1161,960,674 - 61,997,009 (+)NCBICelera
Cytogenetic Map11q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nr1i2
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 69057
Created: 2001-11-08
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE