Wac-ps1 (WW domain containing adaptor with coiled-coil, pseudogene 1) - Rat Genome Database

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Gene: Wac-ps1 (WW domain containing adaptor with coiled-coil, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Wac-ps1
Name: WW domain containing adaptor with coiled-coil, pseudogene 1
RGD ID: 6502562
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC100909597; WW domain-containing adapter protein with coiled-coil-like
Related Functional Gene: Wac  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr867,753,906 - 7,756,981 (+)NCBIGRCr8
mRatBN7.262,000,278 - 2,003,353 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0617,477,782 - 17,542,849 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0627,383,393 - 27,384,301 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera61,801,946 - 1,805,291 (+)NCBICelera
Cytogenetic Map6q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Wac-ps1
11 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_006225665   ⟹   XP_006225727
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera61,801,946 - 1,805,291 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008764495   ⟹   XP_008762717
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0617,477,782 - 17,542,849 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-38807 BioCyc
NCBI Gene LOC100909597 ENTREZGENE
PhenoGen Wac-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Wac-ps1  WW domain containing adaptor with coiled-coil, pseudogene 1  LOC100909597  WW domain-containing adapter protein with coiled-coil-like  Symbol and Name Changed 1299863 APPROVED
2012-07-05 LOC100909597  WW domain-containing adapter protein with coiled-coil-like      Symbol and Name status set to provisional 70820 PROVISIONAL