Atp5f1c-ps2 (ATP synthase F1 subunit gamma, pseudogene 2) - Rat Genome Database

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Gene: Atp5f1c-ps2 (ATP synthase F1 subunit gamma, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Atp5f1c-ps2
Name: ATP synthase F1 subunit gamma, pseudogene 2
RGD ID: 6491579
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: ATP synthase subunit gamma, mitochondrial-like; LOC100911640
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X135,424,833 - 135,429,030 (+)NCBIGRCr8
mRatBN7.2X130,540,508 - 130,544,705 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X138,259,948 - 138,264,145 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X138,313,407 - 138,317,604 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX129,458,404 - 129,462,602 (+)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Atp5f1c-ps2
20 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1050 BioCyc
NCBI Gene LOC100911640 ENTREZGENE
PhenoGen Atp5f1c-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Atp5f1c-ps2  ATP synthase F1 subunit gamma, pseudogene 2  LOC100911640  ATP synthase subunit gamma, mitochondrial-like  Symbol and Name Changed 1299863 APPROVED
2012-07-05 LOC100911640  ATP synthase subunit gamma, mitochondrial-like      Symbol and Name status set to provisional 70820 PROVISIONAL