Odaph (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 16,356,104 - 16,364,420 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 16,071,835 - 16,080,151 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 16,073,058 - 16,080,129 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 16,085,362 - 16,093,679 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 17,404,253 - 17,412,570 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 16,096,382 - 16,104,699 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 17,575,295 - 17,583,214 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 17,575,758 - 17,582,823 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 17,492,753 - 17,500,646 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 14 | 15,465,276 - 15,473,195 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
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ODAPH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 75,556,066 - 75,565,893 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 75,556,048 - 75,565,871 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 76,481,276 - 76,491,103 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 76,700,282 - 76,708,951 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 73,777,392 - 73,786,055 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q21.1 | NCBI | | | | | HuRef | 4 | 72,228,125 - 72,237,965 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 76,458,040 - 76,467,887 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 78,896,230 - 78,906,039 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Odaph (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 92,135,332 - 92,143,176 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 92,135,334 - 92,143,179 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 91,987,473 - 91,995,317 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 91,987,475 - 91,995,320 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 92,416,499 - 92,424,343 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 93,062,673 - 93,070,520 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 90,130,731 - 90,138,701 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | E2 | NCBI | | | | | cM Map | 5 | 45.68 | NCBI | | | | |
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Odaph (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955474 | 1,502,791 - 1,509,294 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955474 | 1,502,798 - 1,509,307 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ODAPH (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 54,508,671 - 54,517,446 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 54,691,688 - 54,706,601 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 48,640,355 - 48,649,546 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 54,474,726 - 54,484,548 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 54,471,278 - 54,484,548 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ODAPH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 32 | 133,974 - 141,303 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 133,816 - 140,958 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 41,740,983 - 41,747,967 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 157,536 - 164,520 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 157,378 - 164,520 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 154,446 - 161,439 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 112,634 - 119,621 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 40,053,050 - 40,060,040 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Odaph (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ODAPH (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 71,215,152 - 71,226,319 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 71,215,091 - 71,225,787 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 75,281,974 - 75,291,896 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ODAPH (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 24,062,924 - 24,073,371 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 24,063,695 - 24,072,500 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 2,390,890 - 2,399,782 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Odaph (Heterocephalus glaber - naked mole-rat) |
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