Tmx3-ps1 (thioredoxin-related transmembrane protein 3, pseudogene 1) - Rat Genome Database

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Gene: Tmx3-ps1 (thioredoxin-related transmembrane protein 3, pseudogene 1) Rattus norvegicus
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Symbol: Tmx3-ps1
Name: thioredoxin-related transmembrane protein 3, pseudogene 1
RGD ID: 6486869
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC100912413; protein disulfide-isomerase TMX3-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8173,844,053 - 3,846,332 (+)NCBIGRCr8
mRatBN7.2173,838,443 - 3,842,298 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0174,204,434 - 4,207,042 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0176,432,457 - 6,433,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera173,967,261 - 3,969,869 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Tmx3-ps1
10 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-10471 BioCyc
NCBI Gene LOC100912413 ENTREZGENE
PhenoGen Tmx3-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Tmx3-ps1  thioredoxin-related transmembrane protein 3, pseudogene 1  LOC100912413  protein disulfide-isomerase TMX3-like  Symbol and Name Changed 1299863 APPROVED
2012-07-05 LOC100912413  protein disulfide-isomerase TMX3-like      Symbol and Name status set to provisional 70820 PROVISIONAL